RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 A0A0J9YY10 115 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 CENPVL1A0A0U1RR11 272 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 SHISA3A0PJX4 238 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 FAM86C2PA6NEL3 165 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 C2orf74A8MZ97 194 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 H0YGG7 62 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 CHP2O43745 196 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 GALR3O60755 368 aaPredicted RBP11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 SC5DO75845 299 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 SLC2A10O95528 541 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 CH25HO95992 272 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 CD1AP06126 327 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 BMP7P18075 431 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 F8A1P23610 371 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 AZGP1P25311 298 aaKnown RBP11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 KIR2DL3P43628 341 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 MAP2K3P46734 347 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 SRP54P61011 504 aaKnown RBP11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 ARF3P61204 181 aaPredicted RBP11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 UBE2IP63279 158 aaKnown RBP11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 POU6F2P78424 691 aaPredicted RBP11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 MRPS21P82921 87 aaKnown RBP11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 PLAURQ03405 335 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 POU4F2Q12837 409 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 CARTPTQ16568 116 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 ZNF791Q3KP31 576 aaPredicted RBP11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 CCDC92Q53HC0 331 aaPredicted RBP11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 HACD4Q5VWC8 232 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 MZT2BQ6NZ67 158 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 GALNT12Q8IXK2 581 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 C7orf61Q8IZ16 206 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 CDK20Q8IZL9 346 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 SIMC1Q8NDZ2 872 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 GPBAR1Q8TDU6 330 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 RNF170Q96K19 258 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 FRMD6Q96NE9 622 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 TMEM43Q9BTV4 400 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 LMF2Q9BU23 707 aaKnown RBP11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 DPH1Q9BZG8 443 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 TRIM36Q9NQ86 728 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 TRPV5Q9NQA5 729 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 NDRG2Q9UN36 371 aaKnown RBP11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 CACNA1IQ9P0X4 2223 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 SCN3AQ9NY46 2000 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 A0A0B4J2E0 115 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 A0A1B0GX12 115 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 BLACEA4D250 179 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 OR5K4A6NMS3 321 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 C12orf71A8MTZ7 269 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 NARSO43776 548 aaKnown RBP11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 IDH3BO43837 385 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 FGF17O60258 216 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 KLF8O95600 359 aaPredicted RBP11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 SLC35E2P0CK97 266 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 IFI30P13284 250 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 PRG2P13727 222 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 PAICSP22234 425 aaKnown RBP11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 MYL9P24844 172 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 CTHP32929 405 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 NR4A2P43354 598 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 RAB38P57729 211 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 CLDN2P57739 230 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 GPR18Q14330 331 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 SF3A2Q15428 464 aaKnown RBP11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 GPR68Q15743 365 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 ALG11Q2TAA5 492 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 ZNF362Q5T0B9 420 aaPredicted RBP11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 HBMQ6B0K9 141 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 LINC00114Q6XXX2 140 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 PXKQ7Z7A4 578 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 TCTE3Q8IZS6 198 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 CA13Q8N1Q1 262 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 ARHGEF39Q8N4T4 335 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 CAMKK1Q8N5S9 505 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 LSMEM1Q8N8F7 131 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 COX18Q8N8Q8 333 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 ZCCHC10Q8TBK6 192 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 RERGQ96A58 199 aaPredicted RBP11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 COL26A1Q96A83 441 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 BPIFA2Q96DR5 249 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 SENP5Q96HI0 755 aaPredicted RBP11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 RPP25Q9BUL9 199 aaKnown RBP11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 ALG8Q9BVK2 526 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 TMEM168Q9H0V1 697 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 SLC6A17Q9H1V8 727 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 CYSLTR2Q9NS75 346 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 KLHL21Q9UJP4 597 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 SERTAD3Q9UJW9 196 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 MED31Q9Y3C7 131 aa11.6□□□□□ -0.55
ECHDC1-209ENST00000454591 LOC105369274A0A096LPK9 316 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 A0A0B4J293 547 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 KIR2DS5A0A0G2JLQ3 304 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 A0A0G2JNG1 304 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 LOC102723532A0A0G2JNH3 316 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 OR6C74A6NCV1 312 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 KIR2DS3K7RE56 304 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 LRRTM2O43300 516 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 HPGDSO60760 199 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 DNAJB6O75190 326 aa11.59□□□□□ -0.55
ECHDC1-209ENST00000454591 SLC43A1O75387 559 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms