RNA–Protein interactions for RNA: ENST00000443528.5

ACTB-206, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 569 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-206ENST00000443528 NSUN5P2Q63ZY6 315 aa14.21□□□□□ -0.13
ACTB-206ENST00000443528 CCDC71Q8IV32 467 aaPredicted RBP14.21□□□□□ -0.13
ACTB-206ENST00000443528 ZNF619Q8N2I2 560 aa14.21□□□□□ -0.13
ACTB-206ENST00000443528 ZPLD1Q8TCW7 415 aa14.21□□□□□ -0.13
ACTB-206ENST00000443528 TRNT1Q96Q11 434 aaKnown RBP14.21□□□□□ -0.13
ACTB-206ENST00000443528 TUBA1CQ9BQE3 449 aa14.21□□□□□ -0.13
ACTB-206ENST00000443528 PIGQQ9BRB3 760 aa14.21□□□□□ -0.13
ACTB-206ENST00000443528 SLC38A1Q9H2H9 487 aa14.21□□□□□ -0.13
ACTB-206ENST00000443528 RUBCNLQ9H714 662 aa14.21□□□□□ -0.13
ACTB-206ENST00000443528 MED17Q9NVC6 651 aa14.21□□□□□ -0.13
ACTB-206ENST00000443528 ICAM5Q9UMF0 924 aa14.21□□□□□ -0.13
ACTB-206ENST00000443528 LIPT1Q9Y234 373 aa14.21□□□□□ -0.13
ACTB-206ENST00000443528 L3MBTL1Q9Y468 752 aa14.21□□□□□ -0.13
ACTB-206ENST00000443528 MED12Q93074 2177 aa14.21□□□□□ -0.13
ACTB-206ENST00000443528 A0A087WZY1 265 aa14.2□□□□□ -0.14
ACTB-206ENST00000443528 TRBV5-3A0A0A0MS03 114 aa14.2□□□□□ -0.14
ACTB-206ENST00000443528 A0A0G2JNJ9 132 aa14.2□□□□□ -0.14
ACTB-206ENST00000443528 A0A1W2PP18 115 aa14.2□□□□□ -0.14
ACTB-206ENST00000443528 GTPBP1O00178 669 aaKnown RBP14.2□□□□□ -0.14
ACTB-206ENST00000443528 CLIC1O00299 241 aa14.2□□□□□ -0.14
ACTB-206ENST00000443528 CLDN14O95500 239 aa14.2□□□□□ -0.14
ACTB-206ENST00000443528 GRNP28799 593 aaKnown RBP14.2□□□□□ -0.14
ACTB-206ENST00000443528 CRATP43155 626 aa14.2□□□□□ -0.14
ACTB-206ENST00000443528 P2RX1P51575 399 aa14.2□□□□□ -0.14
ACTB-206ENST00000443528 CLDN15P56746 228 aa14.2□□□□□ -0.14
ACTB-206ENST00000443528 RGNQ15493 299 aa14.2□□□□□ -0.14
ACTB-206ENST00000443528 RIPPLY2Q5TAB7 128 aa14.2□□□□□ -0.14
ACTB-206ENST00000443528 LRRC74BQ6ZQY2 392 aa14.2□□□□□ -0.14
ACTB-206ENST00000443528 HMGN2P46Q86SG4 172 aa14.2□□□□□ -0.14
ACTB-206ENST00000443528 ADGRE4PQ86SQ3 457 aa14.2□□□□□ -0.14
ACTB-206ENST00000443528 OR10Q1Q8NGQ4 319 aa14.2□□□□□ -0.14
ACTB-206ENST00000443528 POC1BQ8TC44 478 aa14.2□□□□□ -0.14
ACTB-206ENST00000443528 ZNF524Q96C55 264 aa14.2□□□□□ -0.14
ACTB-206ENST00000443528 TRIB1Q96RU8 372 aa14.2□□□□□ -0.14
ACTB-206ENST00000443528 QRSL1Q9H0R6 528 aaKnown RBP14.2□□□□□ -0.14
ACTB-206ENST00000443528 COQ3Q9NZJ6 369 aa14.2□□□□□ -0.14
ACTB-206ENST00000443528 VAPAQ9P0L0 249 aa14.2□□□□□ -0.14
ACTB-206ENST00000443528 Q9UFV3 132 aa14.2□□□□□ -0.14
ACTB-206ENST00000443528 KLF2Q9Y5W3 355 aaPredicted RBP14.2□□□□□ -0.14
ACTB-206ENST00000443528 SPTBN1Q01082 2364 aaKnown RBP14.2□□□□□ -0.14
ACTB-206ENST00000443528 PHF3Q92576 2039 aaKnown RBP14.19□□□□□ -0.14
ACTB-206ENST00000443528 C7orf72A4D263 438 aa14.19□□□□□ -0.14
ACTB-206ENST00000443528 CD8B2A6NJW9 211 aa14.19□□□□□ -0.14
ACTB-206ENST00000443528 H0Y3Z8 333 aa14.19□□□□□ -0.14
ACTB-206ENST00000443528 H0YC42 278 aa14.19□□□□□ -0.14
ACTB-206ENST00000443528 H3BML4 177 aa14.19□□□□□ -0.14
ACTB-206ENST00000443528 LINC01387J3KSC0 135 aa14.19□□□□□ -0.14
ACTB-206ENST00000443528 ZNF264O43296 627 aa14.19□□□□□ -0.14
ACTB-206ENST00000443528 EIF4E2O60573 245 aaKnown RBP14.19□□□□□ -0.14
ACTB-206ENST00000443528 BCAS1O75363 584 aaPredicted RBP14.19□□□□□ -0.14
ACTB-206ENST00000443528 LINGO3P0C6S8 592 aa14.19□□□□□ -0.14
ACTB-206ENST00000443528 UBL4AP11441 157 aa14.19□□□□□ -0.14
ACTB-206ENST00000443528 PEPDP12955 493 aa14.19□□□□□ -0.14
ACTB-206ENST00000443528 POU3F2P20265 443 aaPredicted RBP14.19□□□□□ -0.14
ACTB-206ENST00000443528 PSMA4P25789 261 aaKnown RBP14.19□□□□□ -0.14
ACTB-206ENST00000443528 CHRNB4P30926 498 aa14.19□□□□□ -0.14
ACTB-206ENST00000443528 CEACAM8P31997 349 aaPredicted RBP14.19□□□□□ -0.14
ACTB-206ENST00000443528 ZNF41P51814 821 aaPredicted RBP14.19□□□□□ -0.14
ACTB-206ENST00000443528 SUCLG1P53597 346 aaKnown RBP14.19□□□□□ -0.14
ACTB-206ENST00000443528 TPD52P55327 224 aaPredicted RBP14.19□□□□□ -0.14
ACTB-206ENST00000443528 SUMO3P55854 103 aaPredicted RBP14.19□□□□□ -0.14
ACTB-206ENST00000443528 DSTNP60981 165 aa14.19□□□□□ -0.14
ACTB-206ENST00000443528 PLAURQ03405 335 aa14.19□□□□□ -0.14
ACTB-206ENST00000443528 SKP2Q13309 424 aa14.19□□□□□ -0.14
ACTB-206ENST00000443528 FGFBP1Q14512 234 aa14.19□□□□□ -0.14
ACTB-206ENST00000443528 SF3B4Q15427 424 aaKnown RBP eCLIP14.19□□□□□ -0.142e-17■■■■□ 24.5
ACTB-206ENST00000443528 TOMM34Q15785 309 aaPredicted RBP14.19□□□□□ -0.14
ACTB-206ENST00000443528 PLXDC2Q6UX71 529 aa14.19□□□□□ -0.14
ACTB-206ENST00000443528 DLEU7Q6UYE1 221 aa14.19□□□□□ -0.14
ACTB-206ENST00000443528 LACC1Q8IV20 430 aa14.19□□□□□ -0.14
ACTB-206ENST00000443528 GTPBP8Q8N3Z3 284 aaPredicted RBP14.19□□□□□ -0.14
ACTB-206ENST00000443528 TNIP2Q8NFZ5 429 aa14.19□□□□□ -0.14
ACTB-206ENST00000443528 LILRB4Q8NHJ6 448 aa14.19□□□□□ -0.14
ACTB-206ENST00000443528 GPR119Q8TDV5 335 aa14.19□□□□□ -0.14
ACTB-206ENST00000443528 CA5BP1Q8WTZ4 195 aa14.19□□□□□ -0.14
ACTB-206ENST00000443528 ASB5Q8WWX0 329 aa14.19□□□□□ -0.14
ACTB-206ENST00000443528 OIT3Q8WWZ8 545 aa14.19□□□□□ -0.14
ACTB-206ENST00000443528 ZBTB8AQ96BR9 441 aa14.19□□□□□ -0.14
ACTB-206ENST00000443528 CALHM2Q9HA72 323 aa14.19□□□□□ -0.14
ACTB-206ENST00000443528 KLHL14Q9P2G3 628 aa14.19□□□□□ -0.14
ACTB-206ENST00000443528 PCNX1Q96RV3 2341 aa14.18□□□□□ -0.14
ACTB-206ENST00000443528 MBD3L4A6NDZ8 208 aaPredicted RBP14.18□□□□□ -0.14
ACTB-206ENST00000443528 MBD3L3A6NE82 208 aaPredicted RBP14.18□□□□□ -0.14
ACTB-206ENST00000443528 MBD3L5A6NJ08 208 aaPredicted RBP14.18□□□□□ -0.14
ACTB-206ENST00000443528 CLDN24A6NM45 220 aa14.18□□□□□ -0.14
ACTB-206ENST00000443528 PRSS44E7EML9 344 aa14.18□□□□□ -0.14
ACTB-206ENST00000443528 DNAJA2O60884 412 aa14.18□□□□□ -0.14
ACTB-206ENST00000443528 CSTAP01040 98 aa14.18□□□□□ -0.14
ACTB-206ENST00000443528 NUDT7P0C024 238 aa14.18□□□□□ -0.14
ACTB-206ENST00000443528 TFPTP0C1Z6 253 aa14.18□□□□□ -0.14
ACTB-206ENST00000443528 NR2F1P10589 423 aa14.18□□□□□ -0.14
ACTB-206ENST00000443528 ZNF17P17021 662 aa14.18□□□□□ -0.14
ACTB-206ENST00000443528 RPS4Y1P22090 263 aaKnown RBP14.18□□□□□ -0.14
ACTB-206ENST00000443528 HTR1EP28566 365 aa14.18□□□□□ -0.14
ACTB-206ENST00000443528 TIMP3P35625 211 aa14.18□□□□□ -0.14
ACTB-206ENST00000443528 PGM1P36871 562 aa14.18□□□□□ -0.14
ACTB-206ENST00000443528 CLDN20P56880 219 aa14.18□□□□□ -0.14
ACTB-206ENST00000443528 HPCAP84074 193 aa14.18□□□□□ -0.14
ACTB-206ENST00000443528 RETREG3Q86VR2 466 aa14.18□□□□□ -0.14
ACTB-206ENST00000443528 LIX1LQ8IVB5 337 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms