RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 ORC2Q13416 577 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 MED21Q13503 144 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 APOFQ13790 326 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 KCNJ11Q14654 390 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 TRAM1Q15629 374 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 CSRP2Q16527 193 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 HAGHQ16775 308 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 MICBQ29980 383 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 KIF19Q2TAC6 998 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 COX19Q49B96 90 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 SLC25A53Q5H9E4 307 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 PRAMEF8Q5VWM4 474 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 PRAMEF7Q5VXH5 474 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 LIPMQ5VYY2 423 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 OR8G2PQ6IF36 304 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 KYAT3Q6YP21 454 aaKnown RBP4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 MBOAT1Q6ZNC8 495 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 CYS1Q717R9 158 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 NAXDQ8IW45 347 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 TMEM185AQ8NFB2 350 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 OR5T3Q8NGG3 340 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 OR51L1Q8NGJ5 315 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 OR11L1Q8NGX0 322 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 SPATA22Q8NHS9 363 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 RHEBL1Q8TAI7 183 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 ZCCHC10Q8TBK6 192 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 DYNC2LI1Q8TCX1 351 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 DNAJB3Q8WWF6 145 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 NSMAFQ92636 917 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 MIB2Q96AX9 1013 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 OTULINQ96BN8 352 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 CERS2Q96G23 380 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 C16orf58Q96GQ5 468 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 IGSF21Q96ID5 467 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 LMLNQ96KR4 655 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 SENP8Q96LD8 212 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 TSSK3Q96PN8 268 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 GAD1Q99259 594 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 STACQ99469 402 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 RBBP8Q99708 897 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 CMKLR1Q99788 373 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 AIF1LQ9BQI0 150 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 BTBD10Q9BSF8 475 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 ALG12Q9BV10 488 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 ROGDIQ9GZN7 287 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 OR2AG1Q9H205 316 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 ACTL8Q9H568 366 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 SYNPO2LQ9H987 977 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 MEAF6Q9HAF1 191 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 ZNF334Q9HCZ1 680 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 HRASLSQ9HDD0 168 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 FZD3Q9NPG1 666 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 TMEM138Q9NPI0 162 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 PDGFCQ9NRA1 345 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 PNPOQ9NVS9 261 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 TMEM9Q9P0T7 183 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 RHCGQ9UBD6 479 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 SAE1Q9UBE0 346 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 SLC25A10Q9UBX3 287 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 ZNF282Q9UDV7 671 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 ZNF221Q9UK13 617 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 FZD1Q9UP38 647 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 UGT2A1Q9Y4X1 527 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 ZMYM6O95789 1325 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 FAM208AQ9UK61 1670 aaKnown RBP4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 KDM6AO15550 1401 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 ANKARQ7Z5J8 1434 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 WNK3Q9BYP7 1800 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 KCNE1BA0A087WTH5 132 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 MBLAC1A4D2B0 266 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 A8MU76 341 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 H3BN98 237 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 TRAFD1O14545 582 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 IMPA2O14732 288 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 TRIM24O15164 1050 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 GRM6O15303 877 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 INPP4BO15327 924 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 RGS5O15539 181 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 UPK3AO75631 287 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 SUPT7LO94864 414 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 WDR47O94967 919 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 CYB5R3P00387 301 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 SERPINA1P01009 418 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 CST4P01036 141 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 IFNA5P01569 189 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 RPN2P04844 631 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 C2P06681 752 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 HTR1AP08908 422 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 NPPBP16860 134 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 ZNF23P17027 643 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 DRD1P21728 446 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 BGNP21810 368 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 PAICSP22234 425 aaKnown RBP4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 DDOSTP39656 456 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 MPLP40238 635 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 MATKP42679 507 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 MTNR1AP48039 350 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 MRPL19P49406 292 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms