RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 TUBBP07437 444 aa18.54■□□□□ 0.56
CPNE1-219ENST00000440240 LINGO3P0C6S8 592 aa18.54■□□□□ 0.56
CPNE1-219ENST00000440240 ATP6V1C1P21283 382 aa18.54■□□□□ 0.56
CPNE1-219ENST00000440240 ADH6P28332 368 aa18.54■□□□□ 0.56
CPNE1-219ENST00000440240 HPCAL1P37235 193 aa18.54■□□□□ 0.56
CPNE1-219ENST00000440240 CCNJQ5T5M9 372 aa18.54■□□□□ 0.56
CPNE1-219ENST00000440240 CIARTQ8N365 385 aaPredicted RBP18.54■□□□□ 0.56
CPNE1-219ENST00000440240 NATD1Q8N6N6 113 aa18.54■□□□□ 0.56
CPNE1-219ENST00000440240 ZNF527Q8NB42 609 aa18.54■□□□□ 0.56
CPNE1-219ENST00000440240 PPP1R14CQ8TAE6 165 aa18.54■□□□□ 0.56
CPNE1-219ENST00000440240 POC1BQ8TC44 478 aa18.54■□□□□ 0.56
CPNE1-219ENST00000440240 EPS8L3Q8TE67 593 aaKnown RBP18.54■□□□□ 0.56
CPNE1-219ENST00000440240 TWIST2Q8WVJ9 160 aa18.54■□□□□ 0.56
CPNE1-219ENST00000440240 CHMP6Q96FZ7 201 aa18.54■□□□□ 0.56
CPNE1-219ENST00000440240 PPP3R2Q96LZ3 170 aa18.54■□□□□ 0.56
CPNE1-219ENST00000440240 KLHL15Q96M94 604 aa18.54■□□□□ 0.56
CPNE1-219ENST00000440240 HDHD5Q9BXW7 423 aa18.54■□□□□ 0.56
CPNE1-219ENST00000440240 TMEM185BQ9H7F4 350 aa18.54■□□□□ 0.56
CPNE1-219ENST00000440240 FN1P02751 2386 aaKnown RBP18.54■□□□□ 0.56
CPNE1-219ENST00000440240 NPHS1O60500 1241 aa18.53■□□□□ 0.56
CPNE1-219ENST00000440240 PSMB1P20618 241 aaKnown RBP18.53■□□□□ 0.56
CPNE1-219ENST00000440240 LASP1Q14847 261 aaKnown RBP18.53■□□□□ 0.56
CPNE1-219ENST00000440240 CD226Q15762 336 aa18.53■□□□□ 0.56
CPNE1-219ENST00000440240 UGT3A2Q3SY77 523 aa18.53■□□□□ 0.56
CPNE1-219ENST00000440240 ZNF704Q6ZNC4 412 aaPredicted RBP18.53■□□□□ 0.56
CPNE1-219ENST00000440240 PHOSPHO1Q8TCT1 267 aa18.53■□□□□ 0.56
CPNE1-219ENST00000440240 TMEM171Q8WVE6 324 aa18.53■□□□□ 0.56
CPNE1-219ENST00000440240 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.53■□□□□ 0.563e-13■■■■■ 108.9
CPNE1-219ENST00000440240 CPNE4Q96A23 557 aaPredicted RBP18.53■□□□□ 0.56
CPNE1-219ENST00000440240 OTUB1Q96FW1 271 aaPredicted RBP18.53■□□□□ 0.56
CPNE1-219ENST00000440240 ACTR6Q9GZN1 396 aa18.53■□□□□ 0.56
CPNE1-219ENST00000440240 SIRT3Q9NTG7 399 aaPredicted RBP18.53■□□□□ 0.56
CPNE1-219ENST00000440240 SNX8Q9Y5X2 465 aa18.53■□□□□ 0.56
CPNE1-219ENST00000440240 HIVEP2P31629 2446 aa18.53■□□□□ 0.56
CPNE1-219ENST00000440240 GJE1A6NN92 205 aa18.52■□□□□ 0.56
CPNE1-219ENST00000440240 H3BNH8 94 aa18.52■□□□□ 0.56
CPNE1-219ENST00000440240 PIP5K1BO14986 540 aa18.52■□□□□ 0.56
CPNE1-219ENST00000440240 SCAMP2O15127 329 aaKnown RBP18.52■□□□□ 0.56
CPNE1-219ENST00000440240 CHRNGP07510 517 aa18.52■□□□□ 0.56
CPNE1-219ENST00000440240 KRT16P08779 473 aa18.52■□□□□ 0.56
CPNE1-219ENST00000440240 EFNA1P20827 205 aaPredicted RBP18.52■□□□□ 0.56
CPNE1-219ENST00000440240 ELK4P28324 431 aa18.52■□□□□ 0.56
CPNE1-219ENST00000440240 AGTR1P30556 359 aa18.52■□□□□ 0.56
CPNE1-219ENST00000440240 PTH2RP49190 550 aa18.52■□□□□ 0.56
CPNE1-219ENST00000440240 RNPS1Q15287 305 aaKnown RBP18.52■□□□□ 0.56
CPNE1-219ENST00000440240 ARL13AQ5H913 290 aaPredicted RBP18.52■□□□□ 0.56
CPNE1-219ENST00000440240 TMEM201Q5SNT2 666 aa18.52■□□□□ 0.56
CPNE1-219ENST00000440240 CDC73Q6P1J9 531 aa18.52■□□□□ 0.56
CPNE1-219ENST00000440240 STEAP2Q8NFT2 490 aa18.52■□□□□ 0.56
CPNE1-219ENST00000440240 ADAMTS15Q8TE58 950 aa18.52■□□□□ 0.56
CPNE1-219ENST00000440240 NUDT8Q8WV74 236 aa18.52■□□□□ 0.56
CPNE1-219ENST00000440240 OR5P2Q8WZ92 322 aa18.52■□□□□ 0.56
CPNE1-219ENST00000440240 CDS1Q92903 461 aa18.52■□□□□ 0.56
CPNE1-219ENST00000440240 PRPF18Q99633 342 aaKnown RBP18.52■□□□□ 0.56
CPNE1-219ENST00000440240 ACTRT3Q9BYD9 372 aa18.52■□□□□ 0.56
CPNE1-219ENST00000440240 CXorf56Q9H5V9 222 aa18.52■□□□□ 0.56
CPNE1-219ENST00000440240 GP6Q9HCN6 339 aa18.52■□□□□ 0.56
CPNE1-219ENST00000440240 ATAD3AQ9NVI7 634 aa18.52■□□□□ 0.56
CPNE1-219ENST00000440240 MKS1Q9NXB0 559 aa18.52■□□□□ 0.56
CPNE1-219ENST00000440240 FAF1Q9UNN5 650 aaPredicted RBP18.52■□□□□ 0.56
CPNE1-219ENST00000440240 PEX11AO75192 247 aa18.51■□□□□ 0.55
CPNE1-219ENST00000440240 LYPLA1O75608 230 aaPredicted RBP18.51■□□□□ 0.55
CPNE1-219ENST00000440240 NUDT14O95848 222 aa18.51■□□□□ 0.55
CPNE1-219ENST00000440240 PAX1P15863 534 aa18.51■□□□□ 0.55
CPNE1-219ENST00000440240 ALDH3A1P30838 453 aa18.51■□□□□ 0.55
CPNE1-219ENST00000440240 SFTPDP35247 375 aa18.51■□□□□ 0.55
CPNE1-219ENST00000440240 CCT3P49368 545 aaKnown RBP18.51■□□□□ 0.55
CPNE1-219ENST00000440240 P2RX1P51575 399 aa18.51■□□□□ 0.55
CPNE1-219ENST00000440240 SUMO3P55854 103 aaPredicted RBP18.51■□□□□ 0.55
CPNE1-219ENST00000440240 LSM12Q3MHD2 195 aaKnown RBP18.51■□□□□ 0.55
CPNE1-219ENST00000440240 ATP6AP1LQ52LC2 224 aa18.51■□□□□ 0.55
CPNE1-219ENST00000440240 KLHL26Q53HC5 615 aa18.51■□□□□ 0.55
CPNE1-219ENST00000440240 WFDC8Q8IUA0 241 aa18.51■□□□□ 0.55
CPNE1-219ENST00000440240 ZNF611Q8N823 705 aa18.51■□□□□ 0.55
CPNE1-219ENST00000440240 OR7A2PQ8NGA2 310 aa18.51■□□□□ 0.55
CPNE1-219ENST00000440240 OR56A1Q8NGH5 318 aa18.51■□□□□ 0.55
CPNE1-219ENST00000440240 PSMA8Q8TAA3 256 aa18.51■□□□□ 0.55
CPNE1-219ENST00000440240 IGFBPL1Q8WX77 278 aa18.51■□□□□ 0.55
CPNE1-219ENST00000440240 ROBO4Q8WZ75 1007 aa18.51■□□□□ 0.55
CPNE1-219ENST00000440240 PLPPR2Q96GM1 343 aa18.51■□□□□ 0.55
CPNE1-219ENST00000440240 TMEM204Q9BSN7 226 aa18.51■□□□□ 0.55
CPNE1-219ENST00000440240 C12orf49Q9H741 205 aa18.51■□□□□ 0.55
CPNE1-219ENST00000440240 ACTL7BQ9Y614 415 aa18.51■□□□□ 0.55
CPNE1-219ENST00000440240 GPC6Q9Y625 555 aaPredicted RBP18.51■□□□□ 0.55
CPNE1-219ENST00000440240 TLDC2A0PJX2 215 aa18.5■□□□□ 0.55
CPNE1-219ENST00000440240 TMEM233B4DJY2 109 aa18.5■□□□□ 0.55
CPNE1-219ENST00000440240 GTPBP1O00178 669 aaKnown RBP18.5■□□□□ 0.55
CPNE1-219ENST00000440240 ZNF195O14628 629 aa18.5■□□□□ 0.55
CPNE1-219ENST00000440240 SMAD7O15105 426 aaKnown RBP18.5■□□□□ 0.55
CPNE1-219ENST00000440240 LAMP1P11279 417 aa18.5■□□□□ 0.55
CPNE1-219ENST00000440240 ZNF117Q03924 483 aa18.5■□□□□ 0.55
CPNE1-219ENST00000440240 ZNF239Q16600 458 aaKnown RBP18.5■□□□□ 0.55
CPNE1-219ENST00000440240 BANPQ8N9N5 519 aa18.5■□□□□ 0.55
CPNE1-219ENST00000440240 RNF128Q8TEB7 428 aa18.5■□□□□ 0.55
CPNE1-219ENST00000440240 MOAP1Q96BY2 351 aa18.5■□□□□ 0.55
CPNE1-219ENST00000440240 APOPT1Q96IL0 206 aa18.5■□□□□ 0.55
CPNE1-219ENST00000440240 KLHDC3Q9BQ90 382 aa18.5■□□□□ 0.55
CPNE1-219ENST00000440240 ZNF701Q9NV72 531 aaPredicted RBP18.5■□□□□ 0.55
CPNE1-219ENST00000440240 ICAM5Q9UMF0 924 aa18.5■□□□□ 0.55
CPNE1-219ENST00000440240 CARD8Q9Y2G2 431 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms