RNA–Protein interactions for RNA: ENST00000422026.1

SSX2IP-202, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-202ENST00000422026 ITGA10O75578 1167 aa13.21□□□□□ -0.29
SSX2IP-202ENST00000422026 CYP7B1O75881 506 aa13.21□□□□□ -0.29
SSX2IP-202ENST00000422026 UBTFL6P0CB48 400 aaPredicted RBP13.21□□□□□ -0.29
SSX2IP-202ENST00000422026 ELAVL4P26378 380 aaKnown RBP13.21□□□□□ -0.29
SSX2IP-202ENST00000422026 IST1P53990 364 aa13.21□□□□□ -0.29
SSX2IP-202ENST00000422026 RRADP55042 308 aa13.21□□□□□ -0.29
SSX2IP-202ENST00000422026 MLF1P58340 268 aa13.21□□□□□ -0.29
SSX2IP-202ENST00000422026 PIN1Q13526 163 aaPredicted RBP13.21□□□□□ -0.29
SSX2IP-202ENST00000422026 EXOC3L2Q2M3D2 409 aa13.21□□□□□ -0.29
SSX2IP-202ENST00000422026 CRTC2Q53ET0 693 aaPredicted RBP13.21□□□□□ -0.29
SSX2IP-202ENST00000422026 SWT1Q5T5J6 900 aaKnown RBP13.21□□□□□ -0.29
SSX2IP-202ENST00000422026 WLSQ5T9L3 541 aa13.21□□□□□ -0.29
SSX2IP-202ENST00000422026 H3F3CQ6NXT2 135 aa13.21□□□□□ -0.29
SSX2IP-202ENST00000422026 TMEM81Q6P7N7 255 aa13.21□□□□□ -0.29
SSX2IP-202ENST00000422026 LSMEM1Q8N8F7 131 aa13.21□□□□□ -0.29
SSX2IP-202ENST00000422026 ATG16L2Q8NAA4 619 aa13.21□□□□□ -0.29
SSX2IP-202ENST00000422026 ADAMTS16Q8TE57 1224 aa13.21□□□□□ -0.29
SSX2IP-202ENST00000422026 ASB15Q8WXK1 588 aa13.21□□□□□ -0.29
SSX2IP-202ENST00000422026 CNOT9Q92600 299 aaKnown RBP13.21□□□□□ -0.29
SSX2IP-202ENST00000422026 HGDQ93099 445 aa13.21□□□□□ -0.29
SSX2IP-202ENST00000422026 SLC41A3Q96GZ6 507 aa13.21□□□□□ -0.29
SSX2IP-202ENST00000422026 SLC29A1Q99808 456 aa13.21□□□□□ -0.29
SSX2IP-202ENST00000422026 LAT2Q9GZY6 243 aa13.21□□□□□ -0.29
SSX2IP-202ENST00000422026 LIN28AQ9H9Z2 209 aaKnown RBP13.21□□□□□ -0.29
SSX2IP-202ENST00000422026 ATP13A2Q9NQ11 1180 aa13.21□□□□□ -0.29
SSX2IP-202ENST00000422026 ABI3Q9P2A4 366 aa13.21□□□□□ -0.29
SSX2IP-202ENST00000422026 RPS6KB2Q9UBS0 482 aa13.21□□□□□ -0.29
SSX2IP-202ENST00000422026 IL17BQ9UHF5 180 aa13.21□□□□□ -0.29
SSX2IP-202ENST00000422026 CCDC88CQ9P219 2028 aa13.2□□□□□ -0.3
SSX2IP-202ENST00000422026 CPSF4LA6NMK7 179 aaKnown RBP13.2□□□□□ -0.3
SSX2IP-202ENST00000422026 FRS3O43559 492 aa13.2□□□□□ -0.3
SSX2IP-202ENST00000422026 FADS1O60427 444 aa13.2□□□□□ -0.3
SSX2IP-202ENST00000422026 SEMA7AO75326 666 aa13.2□□□□□ -0.3
SSX2IP-202ENST00000422026 ITGAMP11215 1152 aa13.2□□□□□ -0.3
SSX2IP-202ENST00000422026 LIFP15018 202 aa13.2□□□□□ -0.3
SSX2IP-202ENST00000422026 IGFBP5P24593 272 aa13.2□□□□□ -0.3
SSX2IP-202ENST00000422026 SUMO3P55854 103 aaPredicted RBP13.2□□□□□ -0.3
SSX2IP-202ENST00000422026 C17orf67Q0P5P2 114 aa13.2□□□□□ -0.3
SSX2IP-202ENST00000422026 SKP2Q13309 424 aa13.2□□□□□ -0.3
SSX2IP-202ENST00000422026 SNTA1Q13424 505 aa13.2□□□□□ -0.3
SSX2IP-202ENST00000422026 ATP1A4Q13733 1029 aa13.2□□□□□ -0.3
SSX2IP-202ENST00000422026 TAF11Q15544 211 aa13.2□□□□□ -0.3
SSX2IP-202ENST00000422026 OR1Q1Q15612 314 aa13.2□□□□□ -0.3
SSX2IP-202ENST00000422026 MEP1AQ16819 746 aa13.2□□□□□ -0.3
SSX2IP-202ENST00000422026 FAHD1Q6P587 224 aa13.2□□□□□ -0.3
SSX2IP-202ENST00000422026 LYPD8Q6UX82 237 aa13.2□□□□□ -0.3
SSX2IP-202ENST00000422026 RRM2BQ7LG56 351 aa13.2□□□□□ -0.3
SSX2IP-202ENST00000422026 TMEM179BQ7Z7N9 219 aa13.2□□□□□ -0.3
SSX2IP-202ENST00000422026 CLEC1AQ8NC01 280 aa13.2□□□□□ -0.3
SSX2IP-202ENST00000422026 OR52J3Q8NH60 311 aa13.2□□□□□ -0.3
SSX2IP-202ENST00000422026 RNF138Q8WVD3 245 aa13.2□□□□□ -0.3
SSX2IP-202ENST00000422026 DNAJA4Q8WW22 397 aaPredicted RBP13.2□□□□□ -0.3
SSX2IP-202ENST00000422026 MPP4Q96JB8 637 aa13.2□□□□□ -0.3
SSX2IP-202ENST00000422026 WFDC6Q9BQY6 131 aa13.2□□□□□ -0.3
SSX2IP-202ENST00000422026 FLRT3Q9NZU0 649 aa13.2□□□□□ -0.3
SSX2IP-202ENST00000422026 RHCGQ9UBD6 479 aa13.2□□□□□ -0.3
SSX2IP-202ENST00000422026 MGAT4BQ9UQ53 548 aa13.2□□□□□ -0.3
SSX2IP-202ENST00000422026 MRPS18BQ9Y676 258 aaKnown RBP13.2□□□□□ -0.3
SSX2IP-202ENST00000422026 FAM186AA6NE01 2351 aa13.2□□□□□ -0.3
SSX2IP-202ENST00000422026 SH3PXD2BA1X283 911 aa13.19□□□□□ -0.3
SSX2IP-202ENST00000422026 TRABD2BA6NFA1 517 aa13.19□□□□□ -0.3
SSX2IP-202ENST00000422026 CHP2O43745 196 aa13.19□□□□□ -0.3
SSX2IP-202ENST00000422026 TPST2O60704 377 aa13.19□□□□□ -0.3
SSX2IP-202ENST00000422026 ANGPTL1O95841 491 aa13.19□□□□□ -0.3
SSX2IP-202ENST00000422026 ADAP00813 363 aa13.19□□□□□ -0.3
SSX2IP-202ENST00000422026 LINGO3P0C6S8 592 aa13.19□□□□□ -0.3
SSX2IP-202ENST00000422026 GKN3PP0CG01 181 aa13.19□□□□□ -0.3
SSX2IP-202ENST00000422026 MSX1P28360 303 aa13.19□□□□□ -0.3
SSX2IP-202ENST00000422026 FBXW4P57775 412 aa13.19□□□□□ -0.3
SSX2IP-202ENST00000422026 FOXC1Q12948 553 aa13.19□□□□□ -0.3
SSX2IP-202ENST00000422026 CBFBQ13951 182 aa13.19□□□□□ -0.3
SSX2IP-202ENST00000422026 CD226Q15762 336 aa13.19□□□□□ -0.3
SSX2IP-202ENST00000422026 ZNF791Q3KP31 576 aaPredicted RBP13.19□□□□□ -0.3
SSX2IP-202ENST00000422026 DCAF10Q5QP82 559 aa13.19□□□□□ -0.3
SSX2IP-202ENST00000422026 KDM4DQ6B0I6 523 aa13.19□□□□□ -0.3
SSX2IP-202ENST00000422026 ULK3Q6PHR2 472 aa13.19□□□□□ -0.3
SSX2IP-202ENST00000422026 TBPL2Q6SJ96 375 aa13.19□□□□□ -0.3
SSX2IP-202ENST00000422026 RNF113BQ8IZP6 322 aaKnown RBP13.19□□□□□ -0.3
SSX2IP-202ENST00000422026 TMEM156Q8N614 296 aa13.19□□□□□ -0.3
SSX2IP-202ENST00000422026 TMCO5AQ8N6Q1 288 aa13.19□□□□□ -0.3
SSX2IP-202ENST00000422026 ACOT11Q8WXI4 607 aaPredicted RBP13.19□□□□□ -0.3
SSX2IP-202ENST00000422026 SGCZQ96LD1 299 aa13.19□□□□□ -0.3
SSX2IP-202ENST00000422026 HS6ST2Q96MM7 605 aa13.19□□□□□ -0.3
SSX2IP-202ENST00000422026 CDCP1Q9H5V8 836 aa13.19□□□□□ -0.3
SSX2IP-202ENST00000422026 METTL7AQ9H8H3 244 aa13.19□□□□□ -0.3
SSX2IP-202ENST00000422026 KRT84Q9NSB2 600 aa13.19□□□□□ -0.3
SSX2IP-202ENST00000422026 POFUT2Q9Y2G5 429 aa13.19□□□□□ -0.3
SSX2IP-202ENST00000422026 LRCH1Q9Y2L9 728 aa13.19□□□□□ -0.3
SSX2IP-202ENST00000422026 A0A0B4J2E0 115 aa13.18□□□□□ -0.3
SSX2IP-202ENST00000422026 TRBV4-1A0A0J9YWV2 114 aa13.18□□□□□ -0.3
SSX2IP-202ENST00000422026 A0A1B0GX12 115 aa13.18□□□□□ -0.3
SSX2IP-202ENST00000422026 H0YAE9 185 aa13.18□□□□□ -0.3
SSX2IP-202ENST00000422026 HCRTR2O43614 444 aa13.18□□□□□ -0.3
SSX2IP-202ENST00000422026 OR10H3O60404 316 aa13.18□□□□□ -0.3
SSX2IP-202ENST00000422026 CELA2AP08217 269 aa13.18□□□□□ -0.3
SSX2IP-202ENST00000422026 PGCP20142 388 aa13.18□□□□□ -0.3
SSX2IP-202ENST00000422026 HTR2AP28223 471 aa13.18□□□□□ -0.3
SSX2IP-202ENST00000422026 SOX3P41225 446 aa13.18□□□□□ -0.3
SSX2IP-202ENST00000422026 RBM34P42696 430 aaKnown RBP13.18□□□□□ -0.3
SSX2IP-202ENST00000422026 ACAA2P42765 397 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms