RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 AHRP35869 848 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 SERPINF1P36955 418 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 ZFP36L2P47974 494 aaKnown RBP3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 ARRB1P49407 418 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 GSK3BP49841 420 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 RPS6KA3P51812 740 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 PLA2G16P53816 162 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 MAZP56270 477 aaKnown RBP3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 MTPNP58546 118 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 UBE2IP63279 158 aaKnown RBP3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 MRPS22P82650 360 aaKnown RBP3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 LIPEQ05469 1076 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 KLC1Q07866 573 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 TRAP1Q12931 704 aaKnown RBP3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 CEACAM7Q14002 265 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 HEPACAMQ14CZ8 416 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 KIAA0040Q15053 153 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 CYP51A1Q16850 503 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 SLC5A12Q1EHB4 618 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 DUOXA1Q1HG43 343 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 DEFB133Q30KQ1 61 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 TMEM35AQ53FP2 167 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 PAGE3Q5JUK9 113 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 OR4F3Q6IEY1 312 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 LIN54Q6MZP7 749 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 ANKRD26P1Q6NSI1 321 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 IRGCQ6NXR0 463 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 IYDQ6PHW0 289 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 TSSK4Q6SA08 328 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 SPESP1Q6UW49 350 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 LRRC74BQ6ZQY2 392 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 TMEM26Q6ZUK4 368 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 H1FNTQ75WM6 255 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 SZRD1Q7Z422 152 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 ASPGQ86U10 573 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 TRIM73Q86UV7 250 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 WDR5BQ86VZ2 330 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 ANKRD46Q86W74 232 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 NRROSQ86YC3 692 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 PLD3Q8IV08 490 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 NAGSQ8N159 534 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 TRIML2Q8N7C3 387 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 MFSD9Q8NBP5 474 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 TRPV3Q8NET8 790 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 OR2T12Q8NG77 320 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 OR7A2PQ8NGA2 310 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 OR4K1Q8NGD4 311 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 OR8J3Q8NGG0 315 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 OR4A15Q8NGL6 344 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 ZCCHC10Q8TBK6 192 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 C16orf78Q8WTQ4 265 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 PATE1Q8WXA2 126 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 PYDC1Q8WXC3 89 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 DNASE2BQ8WZ79 361 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 N4BP2L2Q92802 583 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 FAM162AQ96A26 154 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 MTERF3Q96E29 417 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 FAM120BQ96EK7 910 aaKnown RBP3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 EGLN2Q96KS0 407 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 NSMCE2Q96MF7 247 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 ANKRD27Q96NW4 1050 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 F2RL3Q96RI0 385 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 CGREF1Q99674 301 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 NRTNQ99748 197 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 ECSITQ9BQ95 431 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 C17orf62Q9BQA9 187 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 GPATCH1Q9BRR8 931 aaKnown RBP3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 CRB3Q9BUF7 120 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 THUMPD3Q9BV44 507 aaKnown RBP3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 FAIM2Q9BWQ8 316 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 WDR12Q9GZL7 423 aaKnown RBP3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 ROGDIQ9GZN7 287 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 RHBGQ9H310 441 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 VCXQ9H320 206 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 RAD21L1Q9H4I0 556 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 ACTL8Q9H568 366 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 REEP4Q9H6H4 257 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 S100A14Q9HCY8 104 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 PRMT8Q9NR22 394 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 GIMAP4Q9NUV9 329 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 HRASLS2Q9NWW9 162 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 OCIAD1Q9NX40 245 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 SPHK1Q9NYA1 384 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 TMEM181Q9P2C4 612 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 IL36RNQ9UBH0 155 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 ABCD2Q9UBJ2 740 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 UPB1Q9UBR1 384 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 ZNF282Q9UDV7 671 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 ENTPD4Q9Y227 616 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 SPACA6W5XKT8 324 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 KMT2EQ8IZD2 1858 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 SNRNP200O75643 2136 aaKnown RBP3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 TNRC18O15417 2968 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 MDC1Q14676 2089 aaKnown RBP3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 CROCCQ5TZA2 2017 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 NUP210LQ5VU65 1888 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 HEATR5BQ9P2D3 2071 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 IGKV1-8A0A0C4DH67 115 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 PRORSD1PA6NEY8 169 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 LILRA5A6NI73 299 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms