RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 CCNJQ5T5M9 372 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 C19orf48Q6RUI8 117 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 CBLN2Q8IUK8 224 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 LINC00518Q8N0U6 118 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 LILRB1Q8NHL6 650 aaPredicted RBP14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 DUSP19Q8WTR2 217 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 CASTOR1Q8WTX7 329 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 EFCAB11Q9BUY7 163 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 SLC6A20Q9NP91 592 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 SLCO1C1Q9NYB5 712 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 SLC25A13Q9UJS0 675 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 IKZF2Q9UKS7 526 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 SCN3AQ9NY46 2000 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 TRAV27A0A087WT01 109 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 OR2AT4A6NND4 320 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 LATO43561 262 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 KCNJ5P48544 419 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 SIM1P81133 766 aaPredicted RBP14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 TMEM115Q12893 351 aaPredicted RBP14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 TRAM2Q15035 370 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 ETFDHQ16134 617 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 GGTA1PQ4G0N0 100 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 CLLU1OSQ5K130 101 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 PRAMEF13Q5VWM6 474 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 SLC16A13Q7RTY0 426 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 DGLUCYQ7Z3D6 616 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 OR4N5Q8IXE1 308 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 OR4C6Q8NH72 309 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 FCAMRQ8WWV6 532 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 SCMH1Q96GD3 660 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 KATNBL1Q9H079 304 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 KLHL31Q9H511 634 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 OR2S2Q9NQN1 319 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 FBXL4Q9UKA2 621 aa14.88□□□□□ -0.03
PRPF40B-201ENST00000261897 F5H0A9 414 aaPredicted RBP14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 GABRR2P28476 465 aa14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 RBMS1P29558 406 aaKnown RBP14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 ST3GAL3Q11203 375 aa14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 PRAMEF14Q5SWL7 426 aa14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 GPAT4Q86UL3 456 aa14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 FOXRED2Q8IWF2 684 aa14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 CHCHD4Q8N4Q1 142 aa14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 POGLUT1Q8NBL1 392 aa14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 HSD17B8Q92506 261 aa14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 TMEM38AQ9H6F2 299 aa14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 ADAP2Q9NPF8 381 aa14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 SLC22A11Q9NSA0 550 aa14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 RIIAD1A6NNX1 92 aa14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 F8W036 122 aa14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 GPR31O00270 319 aa14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 AKR1A1P14550 325 aa14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 GPR1P46091 355 aa14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 BLOC1S1P78537 153 aa14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 EIF2B5Q13144 721 aaKnown RBP14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 NDUFA9Q16795 377 aa14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 METTL11BQ5VVY1 283 aa14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 SLCO4C1Q6ZQN7 724 aa14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 TMUB2Q71RG4 321 aa14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 NLGN2Q8NFZ4 835 aa14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 GNPDA2Q8TDQ7 276 aa14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 NPAS1Q99742 590 aa14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 HEXA-AS1Q9H8Q6 139 aa14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 HMGN4O00479 90 aa14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 KHNYNO15037 678 aaKnown RBP14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 CA12O43570 354 aa14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 MAS1P04201 325 aa14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 OTPQ5XKR4 325 aa14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 UNQ6126/PRO20091Q6UXV3 157 aa14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 THAP6Q8TBB0 222 aa14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 OSTF1Q92882 214 aa14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 CHST8Q9H2A9 424 aa14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 EVA1AQ9H8M9 152 aa14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 SLC7A7Q9UM01 511 aa14.87□□□□□ -0.03
PRPF40B-201ENST00000261897 MEIKINA0A087WXM9 373 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 STK25O00506 426 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 KRT33AO76009 404 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 OAZ2O95190 189 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 NDUFV2P19404 249 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 AKR1C3P42330 323 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 KCNC3Q14003 757 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 SLC22A10Q63ZE4 541 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 SLC24A5Q71RS6 500 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 SPAG16Q8N0X2 631 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 CLRN3Q8NCR9 226 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 DNAAF1Q8NEP3 725 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 OR4K13Q8NH42 304 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 FANK1Q8TC84 345 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 LINC01599Q8WXQ3 324 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 SMPDL3BQ92485 455 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 KCTD12Q96CX2 325 aaKnown RBP14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 RETREG1Q9H6L5 497 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 SEMA4GQ9NTN9 838 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 PRKAG2Q9UGJ0 569 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 A4GNTQ9UNA3 340 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 SCN4AP35499 1836 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 H3BNC9 293 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 CCSO14618 274 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 SERPINA3P01011 423 aa14.86□□□□□ -0.03
PRPF40B-201ENST00000261897 ATF1P18846 271 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms