RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Gm8159E9Q0R1 267 aa13.05□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 EmdO08579 259 aaKnown RBP13.05□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Gtf2h4O70422 463 aaKnown RBP13.05□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Zfp1P08042 402 aa13.05□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 HgfQ08048 728 aa13.05□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Taar7aQ5QD12 358 aa13.05□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Map4k2Q61161 821 aa13.05□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Fbxo42Q6PDJ6 717 aa13.05□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Derl2Q8BNI4 239 aaKnown RBP13.05□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Csnka2ipQ8CH19 720 aa13.05□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Tmem125Q8CHQ6 216 aa13.05□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Mcoln1Q99J21 580 aa13.05□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Mrps14Q9CR88 128 aa13.05□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 CalcrlQ9R1W5 463 aa13.05□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Kat6aQ8BZ21 2003 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Olfr1375A0A0N4SUP0 313 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Zfp605E9QAH2 694 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 TstP52196 297 aaKnown RBP13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Dsc3P55850 896 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Elmod1Q3V1U8 326 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Grxcr1Q50H32 290 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Znf235Q61116 645 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Zc3hc1Q80YV2 501 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Ptbp3Q8BHD7 523 aaKnown RBP13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 SgtbQ8VD33 304 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Olfr551Q8VG23 315 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Spred2Q924S7 410 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Lysmd1Q9D0E3 226 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Scamp4Q9JKV5 230 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Cldn6Q9Z262 219 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Gm14862B1AV28 81 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 PtprhE9Q0N2 971 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Cyp4a31F8WGU9 509 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Etv4P28322 485 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Capza1P47753 286 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 IduaP48441 634 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Olfr629Q0VBH3 314 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 PfplQ5RKV8 702 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Ttf1Q62187 859 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Galk2Q68FH4 458 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Mgat4aQ812G0 535 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Slc35f1Q8BGK5 408 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Zbtb20Q8K0L9 741 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Tmem106aQ8VC04 261 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Tex29Q9DA77 186 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Tubb3Q9ERD7 450 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Zfp937A2ANU7 503 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Gm13271B1AYH9 182 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Slc22a28B2RT89 552 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 A430033K04RikE9Q8G5 680 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Cd83O88324 196 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Trav8d-2Q5R1B6 112 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Naa50Q6PGB6 169 aaKnown RBP13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 C2cd4bQ80XU5 340 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Itpk1Q8BYN3 419 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Akr1c18Q8K023 323 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Olfr849Q8VFF6 312 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Slc22a30Q96LX3 552 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Atg12Q9CQY1 141 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Tmem138Q9D6G5 162 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Dapl1Q9D757 107 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Rab25Q9WTL2 213 aa13.04□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Trbv20A0A0B4J1H5 111 aa13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Gm42372A0A1B0GT27 204 aa13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Olfr190K7N5T5 307 aa13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Efna3O08545 230 aa13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Pdlim3O70209 316 aaKnown RBP13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 ErgP81270 486 aa13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 C130050O18RikQ497Y9 356 aa13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Gm527Q4KL13 310 aa13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Snx33Q4VAA7 574 aa13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Cyp1b1Q64429 543 aa13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Apex2Q68G58 516 aa13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Pgm2Q7TSV4 620 aa13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 CslQ80X68 466 aa13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Tmbim1Q8BJZ3 309 aa13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Hpf1Q8CFE2 346 aa13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 FbrsQ8R089 466 aa13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Snx20Q9D2Y5 313 aa13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Xylt2Q9EPL0 865 aa13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Clca3a2Q9EQR4 902 aa13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Slc7a7Q9Z1K8 510 aa13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 CntrlA2AL36 2334 aa13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Slc25a25A2ASZ8 469 aa13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Olfr1511E9PWU0 318 aa13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Olfr1510E9PZZ6 318 aa13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Btbd16E9Q173 522 aa13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Nudt19P11930 357 aa13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 GlaP51569 419 aa13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Acta2P62737 377 aaKnown RBP13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Actg2P63268 376 aa13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Rpl19P84099 196 aaKnown RBP13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Npr2Q6VVW5 1047 aa13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Dsg1cQ7TSF0 911 aa13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Lrrn3Q8CBC6 707 aa13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Neto1Q8R4I7 533 aa13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 TapbplQ8VD31 451 aa13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 4930595M18RikA2RRY9 829 aa13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Vmn2r105E9Q3A5 860 aa13.03□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 P01673 111 aa13.03□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 87.7 ms