RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 SLC39A5Q6ZMH5 540 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 C11orf42Q8N5U0 333 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 SMG8Q8ND04 991 aaKnown RBP16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 OR9A2Q8NGT5 310 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 ZNF384Q8TF68 577 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 BTBD2Q9BX70 525 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 TRAPPC2LQ9UL33 140 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 ANGPTL7O43827 346 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 HNRNPFP52597 415 aaKnown RBP16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 ZNF813Q6ZN06 617 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 PQLC3Q8N755 202 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 CMASQ8NFW8 434 aaPredicted RBP16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 ZDHHC18Q9NUE0 388 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 MYH11P35749 1972 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 CA3P07451 260 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 GALNT2Q10471 571 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 MBTPS1Q14703 1052 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 KCTD20Q7Z5Y7 419 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 OR8J1Q8NGP2 316 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 MUCL1Q96DR8 90 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 SGTBQ96EQ0 304 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 MRGPRX2Q96LB1 330 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 PRAMEF27A3QJZ7 478 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 FZD9O00144 591 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 UGDHO60701 494 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 MT-CO2P00403 227 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 HLA-DPB1P04440 258 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 CEBPDP49716 269 aaPredicted RBP16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 AGAP7PQ5VUJ5 663 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 AGAP6Q5VW22 663 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 PRAMEF9Q5VWM5 478 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 CHST14Q8NCH0 376 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 AGAP4Q96P64 663 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 DHRS9Q9BPW9 319 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 ZNF559Q9BR84 538 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 ARMC1Q9NVT9 282 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 CNIH4Q9P003 139 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 C1GALT1C1LP0DN25 315 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 G0S2P27469 103 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 HIST2H3PS2Q5TEC6 136 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 Q6ZSR6 202 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 MISPQ8IVT2 679 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 KIAA1191Q96A73 305 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 SLC29A3Q9BZD2 475 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 NMNAT1Q9HAN9 279 aaPredicted RBP16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 RDH14Q9HBH5 336 aa16.04■□□□□ 0.16
CACNA1A-253ENST00000637927 SLIT2O94813 1529 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 GPR32O75388 356 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 CYP1B1Q16678 543 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 GLB1L2Q8IW92 636 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 OR5D18Q8NGL1 313 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 SPEF2Q9C093 1822 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 SLC22A1O15245 554 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 RETP07949 1114 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 SSX9Q7RTT3 188 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 CLECL1Q8IZS7 167 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 TMEM217Q8N7C4 229 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 FKBP10Q96AY3 582 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 GPR22Q99680 433 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 TSPAN10Q9H1Z9 355 aaPredicted RBP16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 LINC00597Q9H2U6 94 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 FAM120CQ9NX05 1096 aaKnown RBP16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 OR52A4PA6NMU1 304 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 ALDOBP05062 364 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 UGT2B10P36537 528 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 SPOCK1Q08629 439 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 OR4D1Q15615 310 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 PIGWQ7Z7B1 504 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 PLXDC1Q8IUK5 500 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 TP53INP2Q8IXH6 220 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 SPARTQ8N0X7 666 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 DNAJB8Q8NHS0 232 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 SLC35B2Q8TB61 432 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 SAMD8Q96LT4 415 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 CNN2Q99439 309 aaKnown RBP16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 LUZP4Q9P127 313 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 MARCH4Q9P2E8 410 aaPredicted RBP16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 B3GALNT1O75752 331 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 KCNAB2Q13303 367 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 EXOSC7Q15024 291 aaKnown RBP16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 IL23AQ9NPF7 189 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 TBX10O75333 385 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 SLC14A1Q13336 389 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 SLC9A3R2Q15599 337 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 ZFP90Q8TF47 636 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 NANOGQ9H9S0 305 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 SSU72Q9NP77 194 aaKnown RBP16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 ADGRB2O60241 1585 aa16.03■□□□□ 0.16
CACNA1A-253ENST00000637927 PRSS51A0A1B0GVH4 220 aa16.02■□□□□ 0.16
CACNA1A-253ENST00000637927 ARPC5O15511 151 aa16.02■□□□□ 0.16
CACNA1A-253ENST00000637927 ETV4P43268 484 aa16.02■□□□□ 0.16
CACNA1A-253ENST00000637927 HADHBP55084 474 aaKnown RBP16.02■□□□□ 0.16
CACNA1A-253ENST00000637927 RUNX3Q13761 415 aa16.02■□□□□ 0.16
CACNA1A-253ENST00000637927 PIP5KL1Q5T9C9 394 aa16.02■□□□□ 0.16
CACNA1A-253ENST00000637927 MAMDC2Q7Z304 686 aaPredicted RBP16.02■□□□□ 0.16
CACNA1A-253ENST00000637927 HUS1BQ8NHY5 278 aa16.02■□□□□ 0.16
CACNA1A-253ENST00000637927 FAM122AQ96E09 287 aa16.02■□□□□ 0.16
CACNA1A-253ENST00000637927 PHOX2BQ99453 314 aa16.02■□□□□ 0.16
CACNA1A-253ENST00000637927 A0A0A6YYC8 382 aaPredicted RBP16.02■□□□□ 0.16
CACNA1A-253ENST00000637927 I3L1I5 382 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms