RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 GRK1Q15835 563 aa15.93■□□□□ 0.14
SHKBP1-205ENST00000594973 COL28A1Q2UY09 1125 aa15.93■□□□□ 0.14
SHKBP1-205ENST00000594973 TMEM64Q6YI46 380 aa15.93■□□□□ 0.14
SHKBP1-205ENST00000594973 COMTD1Q86VU5 262 aa15.93■□□□□ 0.14
SHKBP1-205ENST00000594973 COMMD7Q86VX2 200 aa15.93■□□□□ 0.14
SHKBP1-205ENST00000594973 CLDN22Q8N7P3 220 aa15.93■□□□□ 0.14
SHKBP1-205ENST00000594973 AQP11Q8NBQ7 271 aa15.93■□□□□ 0.14
SHKBP1-205ENST00000594973 B3GNT7Q8NFL0 401 aa15.93■□□□□ 0.14
SHKBP1-205ENST00000594973 AKAP1Q92667 903 aaKnown RBP eCLIP15.93■□□□□ 0.14
SHKBP1-205ENST00000594973 TM4SF19Q96DZ7 209 aa15.93■□□□□ 0.14
SHKBP1-205ENST00000594973 ZNF354BQ96LW1 612 aa15.93■□□□□ 0.14
SHKBP1-205ENST00000594973 ZNF681Q96N22 645 aa15.93■□□□□ 0.14
SHKBP1-205ENST00000594973 SLC6A18Q96N87 628 aa15.93■□□□□ 0.14
SHKBP1-205ENST00000594973 OPALINQ96PE5 141 aa15.93■□□□□ 0.14
SHKBP1-205ENST00000594973 GAS2L1Q99501 681 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-205ENST00000594973 QRSL1Q9H0R6 528 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-205ENST00000594973 UBE2ZQ9H832 354 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-205ENST00000594973 NMNAT1Q9HAN9 279 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-205ENST00000594973 LMAN1LQ9HAT1 526 aa15.93■□□□□ 0.14
SHKBP1-205ENST00000594973 POT1Q9NUX5 634 aa15.93■□□□□ 0.14
SHKBP1-205ENST00000594973 PTTG3PQ9NZH4 202 aa15.93■□□□□ 0.14
SHKBP1-205ENST00000594973 POFUT2Q9Y2G5 429 aa15.93■□□□□ 0.14
SHKBP1-205ENST00000594973 TRBV4-1A0A0J9YWV2 114 aa15.92■□□□□ 0.14
SHKBP1-205ENST00000594973 C2orf74A8MZ97 194 aa15.92■□□□□ 0.14
SHKBP1-205ENST00000594973 TSPAN4O14817 238 aa15.92■□□□□ 0.14
SHKBP1-205ENST00000594973 IGLV3-19P01714 112 aa15.92■□□□□ 0.14
SHKBP1-205ENST00000594973 CHRM4P08173 479 aa15.92■□□□□ 0.14
SHKBP1-205ENST00000594973 FAM157BP0CG42 384 aa15.92■□□□□ 0.14
SHKBP1-205ENST00000594973 PRKAR1AP10644 381 aa15.92■□□□□ 0.14
SHKBP1-205ENST00000594973 TYRP1P17643 537 aa15.92■□□□□ 0.14
SHKBP1-205ENST00000594973 PSMA1P25786 263 aaKnown RBP15.92■□□□□ 0.14
SHKBP1-205ENST00000594973 BUD31P41223 144 aaPredicted RBP15.92■□□□□ 0.14
SHKBP1-205ENST00000594973 LIMS1P48059 325 aa15.92■□□□□ 0.14
SHKBP1-205ENST00000594973 SIM1P81133 766 aaPredicted RBP15.92■□□□□ 0.14
SHKBP1-205ENST00000594973 PRR5P85299 388 aa15.92■□□□□ 0.14
SHKBP1-205ENST00000594973 FUT5Q11128 374 aa15.92■□□□□ 0.14
SHKBP1-205ENST00000594973 KLHL12Q53G59 568 aa15.92■□□□□ 0.14
SHKBP1-205ENST00000594973 PYDC2Q56P42 97 aa15.92■□□□□ 0.14
SHKBP1-205ENST00000594973 TCTN3Q6NUS6 607 aa15.92■□□□□ 0.14
SHKBP1-205ENST00000594973 SYT13Q7L8C5 426 aa15.92■□□□□ 0.14
SHKBP1-205ENST00000594973 PRSS41Q7RTY9 318 aa15.92■□□□□ 0.14
SHKBP1-205ENST00000594973 FAM46DQ8NEK8 389 aa15.92■□□□□ 0.14
SHKBP1-205ENST00000594973 SLC25A46Q96AG3 418 aa15.92■□□□□ 0.14
SHKBP1-205ENST00000594973 DIRAS2Q96HU8 199 aa15.92■□□□□ 0.14
SHKBP1-205ENST00000594973 ZFYVE21Q9BQ24 234 aa15.92■□□□□ 0.14
SHKBP1-205ENST00000594973 HHATLQ9HCP6 504 aa15.92■□□□□ 0.14
SHKBP1-205ENST00000594973 MS4A12Q9NXJ0 267 aa15.92■□□□□ 0.14
SHKBP1-205ENST00000594973 COQ3Q9NZJ6 369 aa15.92■□□□□ 0.14
SHKBP1-205ENST00000594973 ZNF224Q9NZL3 707 aa15.92■□□□□ 0.14
SHKBP1-205ENST00000594973 ING4Q9UNL4 249 aa15.92■□□□□ 0.14
SHKBP1-205ENST00000594973 MRPS2Q9Y399 296 aaKnown RBP15.92■□□□□ 0.14
SHKBP1-205ENST00000594973 C10orf142B7Z368 130 aa15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 H0YGG7 62 aa15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 M0R3H8 397 aa15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 GASTP01350 101 aa15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 IL1AP01583 271 aa15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 RAF1P04049 648 aa15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 ARSBP15848 533 aa15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 ARF3P61204 181 aaPredicted RBP15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 UBE2IP63279 158 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 TDGQ13569 410 aa15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 RUNX2Q13950 521 aa15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 GAS6Q14393 721 aa15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 C19orf18Q8NEA5 215 aa15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 NUP43Q8NFH3 380 aa15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 OR56A1Q8NGH5 318 aa15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 RERGQ96A58 199 aaPredicted RBP15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 ELP4Q96EB1 424 aa15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 PILRAQ9UKJ1 303 aa15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 PCDHGB7Q9Y5F8 929 aa15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 B4DGG1 531 aa15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 M0R129 80 aa15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 TSC22D2O75157 780 aa15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 PIPP12273 146 aaPredicted RBP15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 CRYBB2P43320 205 aa15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 HMGA2P52926 109 aa15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 TNFRSF17Q02223 184 aa15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 ID2Q02363 134 aa15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 DDI2Q5TDH0 399 aa15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 SHEQ5VZ18 495 aa15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 PLAG1Q6DJT9 500 aa15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 SFXN5Q8TD22 340 aa15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 PPIL3Q9H2H8 161 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 PIGUQ9H490 435 aa15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 RANBP3Q9H6Z4 567 aaPredicted RBP15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 STARD5Q9NSY2 213 aa15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 KCND3Q9UK17 655 aa15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 TDRD6O60522 2096 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-205ENST00000594973 A0A1W2PPC4 97 aa15.9■□□□□ 0.14
SHKBP1-205ENST00000594973 HYKKA2RU49 373 aa15.9■□□□□ 0.14
SHKBP1-205ENST00000594973 SMLR1H3BR10 107 aa15.9■□□□□ 0.14
SHKBP1-205ENST00000594973 EMC8O43402 210 aa15.9■□□□□ 0.14
SHKBP1-205ENST00000594973 B3GALT2O43825 422 aa15.9■□□□□ 0.14
SHKBP1-205ENST00000594973 TPST2O60704 377 aa15.9■□□□□ 0.14
SHKBP1-205ENST00000594973 XKP51811 444 aa15.9■□□□□ 0.14
SHKBP1-205ENST00000594973 HHEXQ03014 270 aa15.9■□□□□ 0.14
SHKBP1-205ENST00000594973 C6orf132Q5T0Z8 1188 aa15.9■□□□□ 0.14
SHKBP1-205ENST00000594973 GPR139Q6DWJ6 353 aa15.9■□□□□ 0.14
SHKBP1-205ENST00000594973 CAMKVQ8NCB2 501 aa15.9■□□□□ 0.14
SHKBP1-205ENST00000594973 WDR36Q8NI36 951 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms