RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 FIG4Q92562 907 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 PIK3R3Q92569 461 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 FAM120BQ96EK7 910 aaKnown RBP6.84□□□□□ -1.31
NPC1-208ENST00000590301 GIMAP5Q96F15 307 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 PGM2Q96G03 612 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 GMPPAQ96IJ6 420 aaPredicted RBP6.84□□□□□ -1.31
NPC1-208ENST00000590301 ZNF845Q96IR2 970 aaPredicted RBP6.84□□□□□ -1.31
NPC1-208ENST00000590301 PINK1Q9BXM7 581 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 RTN4RQ9BZR6 473 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 PIGUQ9H490 435 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 PLEKHF2Q9H8W4 249 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 ZCCHC3Q9NUD5 404 aaKnown RBP6.84□□□□□ -1.31
NPC1-208ENST00000590301 BEX4Q9NWD9 120 aaPredicted RBP6.84□□□□□ -1.31
NPC1-208ENST00000590301 ASIC5Q9NY37 505 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 FLRT3Q9NZU0 649 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 BAIAP2L1Q9UHR4 511 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 MCTS1Q9ULC4 181 aaKnown RBP6.84□□□□□ -1.31
NPC1-208ENST00000590301 FAF1Q9UNN5 650 aaPredicted RBP6.84□□□□□ -1.31
NPC1-208ENST00000590301 PLEKHA6Q9Y2H5 1048 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 EMC9Q9Y3B6 208 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 FIS1Q9Y3D6 152 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 TESMINQ9Y4I5 508 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 ACTL7BQ9Y614 415 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 CACNA1CQ13936 2221 aa6.84□□□□□ -1.32
NPC1-208ENST00000590301 ZNF407Q9C0G0 2248 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 GJE1A6NN92 205 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 C17orf51A8MQB3 221 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 TMEM229AB2RXF0 380 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 TMEM233B4DJY2 109 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 C16orf97H3BN30 126 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 ADAMDEC1O15204 470 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 CTIFO43310 598 aaKnown RBP6.83□□□□□ -1.32
NPC1-208ENST00000590301 SS18L1O75177 396 aaPredicted RBP6.83□□□□□ -1.32
NPC1-208ENST00000590301 PEX11AO75192 247 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 SYNGR4O95473 234 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 AK1P00568 194 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 PLGP00747 810 aaPredicted RBP6.83□□□□□ -1.32
NPC1-208ENST00000590301 CGAP01215 116 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 HMGN2P05204 90 aaKnown RBP6.83□□□□□ -1.32
NPC1-208ENST00000590301 BPGMP07738 259 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 ACP2P11117 423 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 IL11P20809 199 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 TCEA1P23193 301 aaKnown RBP6.83□□□□□ -1.32
NPC1-208ENST00000590301 ELK4P28324 431 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 ADH6P28332 368 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 UGT2B10P36537 528 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 CCT3P49368 545 aaKnown RBP6.83□□□□□ -1.32
NPC1-208ENST00000590301 SUCLG1P53597 346 aaKnown RBP6.83□□□□□ -1.32
NPC1-208ENST00000590301 SUMO3P55854 103 aaPredicted RBP6.83□□□□□ -1.32
NPC1-208ENST00000590301 VSNL1P62760 191 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 TP53BP2Q13625 1128 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 PON3Q15166 354 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 PLPPR5Q32ZL2 321 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 LINC01559Q495D7 138 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 SPDYE7PQ495Y7 208 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 COX20Q5RI15 118 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 GTF2IRD2BQ6EKJ0 949 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 CDC73Q6P1J9 531 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 ESPNLQ6ZVH7 1005 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 BTLAQ7Z6A9 289 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 GTF2IRD2Q86UP8 949 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 GGNQ86UU5 652 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 EXOC3L1Q86VI1 746 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 LRRC34Q8IZ02 419 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 FNDC5Q8NAU1 212 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 ZNF511Q8NB15 262 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 OR6K3Q8NGY3 331 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 OR2W6PQ8NHA6 318 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 OR2V1Q8NHB1 315 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 B4GALNT2Q8NHY0 566 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 PPP1R14CQ8TAE6 165 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 AENQ8WTP8 325 aaKnown RBP6.83□□□□□ -1.32
NPC1-208ENST00000590301 OIT3Q8WWZ8 545 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 JADE3Q92613 823 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 COQ8BQ96D53 544 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 MED18Q9BUE0 208 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 MECRQ9BV79 373 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 ACTRT3Q9BYD9 372 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 PRRG4Q9BZD6 226 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 BHLHE41Q9C0J9 482 aaPredicted RBP6.83□□□□□ -1.32
NPC1-208ENST00000590301 LIME1Q9H400 295 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 GP6Q9HCN6 339 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 SSU72Q9NP77 194 aaKnown RBP6.83□□□□□ -1.32
NPC1-208ENST00000590301 TIGARQ9NQ88 270 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 SIRT3Q9NTG7 399 aaPredicted RBP6.83□□□□□ -1.32
NPC1-208ENST00000590301 MED17Q9NVC6 651 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 SLC17A7Q9P2U7 560 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 PROCRQ9UNN8 238 aa6.83□□□□□ -1.32
NPC1-208ENST00000590301 NIPBLQ6KC79 2804 aaeCLIP6.83□□□□□ -1.32
NPC1-208ENST00000590301 C2CD3Q4AC94 2353 aa6.82□□□□□ -1.32
NPC1-208ENST00000590301 UQCRHLA0A096LP55 91 aa6.82□□□□□ -1.32
NPC1-208ENST00000590301 DUXAA6NLW8 204 aa6.82□□□□□ -1.32
NPC1-208ENST00000590301 H0YC42 278 aa6.82□□□□□ -1.32
NPC1-208ENST00000590301 EIF1AYO14602 144 aaKnown RBP6.82□□□□□ -1.32
NPC1-208ENST00000590301 TM9SF1O15321 606 aa6.82□□□□□ -1.32
NPC1-208ENST00000590301 BIRC5O15392 142 aa6.82□□□□□ -1.32
NPC1-208ENST00000590301 ARHGEF9O43307 516 aa6.82□□□□□ -1.32
NPC1-208ENST00000590301 TYROBPO43914 113 aa6.82□□□□□ -1.32
NPC1-208ENST00000590301 SPAG7O75391 227 aa6.82□□□□□ -1.32
NPC1-208ENST00000590301 SLU7O95391 586 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms