RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 OR4F3Q6IEY1 312 aa11.45□□□□□ -0.58
NPLOC4-213ENST00000573519 MISPQ8IVT2 679 aa11.45□□□□□ -0.58
NPLOC4-213ENST00000573519 RIMKLAQ8IXN7 391 aa11.45□□□□□ -0.58
NPLOC4-213ENST00000573519 FIG4Q92562 907 aa11.45□□□□□ -0.58
NPLOC4-213ENST00000573519 ZNF845Q96IR2 970 aaPredicted RBP11.45□□□□□ -0.58
NPLOC4-213ENST00000573519 PRRG4Q9BZD6 226 aa11.45□□□□□ -0.58
NPLOC4-213ENST00000573519 DPY30Q9C005 99 aa11.45□□□□□ -0.58
NPLOC4-213ENST00000573519 PIGMQ9H3S5 423 aa11.45□□□□□ -0.58
NPLOC4-213ENST00000573519 HHATLQ9HCP6 504 aa11.45□□□□□ -0.58
NPLOC4-213ENST00000573519 RASSF1Q9NS23 344 aa11.45□□□□□ -0.58
NPLOC4-213ENST00000573519 THAP1Q9NVV9 213 aa11.45□□□□□ -0.58
NPLOC4-213ENST00000573519 STOML1Q9UBI4 398 aa11.45□□□□□ -0.58
NPLOC4-213ENST00000573519 PACSIN3Q9UKS6 424 aa11.45□□□□□ -0.58
NPLOC4-213ENST00000573519 AP4B1Q9Y6B7 739 aa11.45□□□□□ -0.58
NPLOC4-213ENST00000573519 TACC2O95359 2948 aa11.45□□□□□ -0.58
NPLOC4-213ENST00000573519 A0A087WZY1 265 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 UQCRHLA0A096LP55 91 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 TNFRSF21O75509 655 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 TNFSF13O75888 250 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 NUDT14O95848 222 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 EPXP11678 715 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 LCN1P31025 176 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 DNAJA1P31689 397 aaKnown RBP11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 EIF1AXP47813 144 aaKnown RBP11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 NME5P56597 212 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 RPS26P62854 115 aaKnown RBP11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 EEF1A1P68104 462 aaKnown RBP11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 HBA1P69905 142 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 SORDQ00796 357 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 CD226Q15762 336 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 SMU1Q2TAY7 513 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 TTMPQ5BVD1 217 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 EEF1A1P5Q5VTE0 462 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 ATG16L1Q676U5 607 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 VWA1Q6PCB0 445 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 BHLHB9Q6PI77 547 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 WDR75Q8IWA0 830 aaKnown RBP11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 CLECL1Q8IZS7 167 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 CLEC4FQ8N1N0 589 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 ZNF614Q8N883 585 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 ZNF527Q8NB42 609 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 OR5D16Q8NGK9 328 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 OR4A15Q8NGL6 344 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 B4GALNT2Q8NHY0 566 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 PSMA8Q8TAA3 256 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 FNDC9Q8TBE3 224 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 PHOSPHO1Q8TCT1 267 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 SFXN5Q8TD22 340 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 MOAP1Q96BY2 351 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 OR7D2Q96RA2 312 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 TMEM185BQ9H7F4 350 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 MANSC1Q9H8J5 431 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 MEAF6Q9HAF1 191 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 GPATCH2Q9NW75 528 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 ASIC5Q9NY37 505 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 PCDHGB4Q9UN71 923 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 KCNE3Q9Y6H6 103 aa11.44□□□□□ -0.58
NPLOC4-213ENST00000573519 GOLGA8QA0A0J9YX86 632 aa11.43□□□□□ -0.58
NPLOC4-213ENST00000573519 RNF103-CHMP3A0A140T963 221 aa11.43□□□□□ -0.58
NPLOC4-213ENST00000573519 A0A1W2PQD3 144 aa11.43□□□□□ -0.58
NPLOC4-213ENST00000573519 GOLGA8OA6NCC3 632 aa11.43□□□□□ -0.58
NPLOC4-213ENST00000573519 GOLGA8NF8WBI6 632 aa11.43□□□□□ -0.58
NPLOC4-213ENST00000573519 H3BNH8 94 aa11.43□□□□□ -0.58
NPLOC4-213ENST00000573519 SDHDO14521 159 aa11.43□□□□□ -0.58
NPLOC4-213ENST00000573519 CRHP06850 196 aa11.43□□□□□ -0.58
NPLOC4-213ENST00000573519 ZNF17P17021 662 aa11.43□□□□□ -0.58
NPLOC4-213ENST00000573519 LBPP18428 481 aa11.43□□□□□ -0.58
NPLOC4-213ENST00000573519 ME2P23368 584 aa11.43□□□□□ -0.58
NPLOC4-213ENST00000573519 KCNJ5P48544 419 aa11.43□□□□□ -0.58
NPLOC4-213ENST00000573519 ART1P52961 327 aa11.43□□□□□ -0.58
NPLOC4-213ENST00000573519 OCRLQ01968 901 aa11.43□□□□□ -0.58
NPLOC4-213ENST00000573519 ZNF117Q03924 483 aa11.43□□□□□ -0.58
NPLOC4-213ENST00000573519 TMEM44Q2T9K0 475 aa11.43□□□□□ -0.58
NPLOC4-213ENST00000573519 PLPPR5Q32ZL2 321 aa11.43□□□□□ -0.58
NPLOC4-213ENST00000573519 EXOSC6Q5RKV6 272 aaKnown RBP11.43□□□□□ -0.58
NPLOC4-213ENST00000573519 GGNQ86UU5 652 aa11.43□□□□□ -0.58
NPLOC4-213ENST00000573519 ANKRD46Q86W74 232 aa11.43□□□□□ -0.58
NPLOC4-213ENST00000573519 CDC20BQ86Y33 519 aa11.43□□□□□ -0.58
NPLOC4-213ENST00000573519 KIRREL3Q8IZU9 778 aa11.43□□□□□ -0.58
NPLOC4-213ENST00000573519 ZNF75CPQ92670 426 aaPredicted RBP11.43□□□□□ -0.58
NPLOC4-213ENST00000573519 ZBTB8AQ96BR9 441 aa11.43□□□□□ -0.58
NPLOC4-213ENST00000573519 STARD4Q96DR4 205 aa11.43□□□□□ -0.58
NPLOC4-213ENST00000573519 SLC35G5Q96KT7 338 aa11.43□□□□□ -0.58
NPLOC4-213ENST00000573519 RNF145Q96MT1 663 aa11.43□□□□□ -0.58
NPLOC4-213ENST00000573519 NPAS1Q99742 590 aa11.43□□□□□ -0.58
NPLOC4-213ENST00000573519 HOXD1Q9GZZ0 328 aa11.43□□□□□ -0.58
NPLOC4-213ENST00000573519 OPN3Q9H1Y3 402 aaPredicted RBP11.43□□□□□ -0.58
NPLOC4-213ENST00000573519 LIME1Q9H400 295 aa11.43□□□□□ -0.58
NPLOC4-213ENST00000573519 WDR55Q9H6Y2 383 aaPredicted RBP11.43□□□□□ -0.58
NPLOC4-213ENST00000573519 MED17Q9NVC6 651 aa11.43□□□□□ -0.58
NPLOC4-213ENST00000573519 CARD8Q9Y2G2 431 aa11.43□□□□□ -0.58
NPLOC4-213ENST00000573519 ZNF175Q9Y473 711 aa11.43□□□□□ -0.58
NPLOC4-213ENST00000573519 SH3D21A4FU49 640 aa11.42□□□□□ -0.58
NPLOC4-213ENST00000573519 A8MXE2 369 aa11.42□□□□□ -0.58
NPLOC4-213ENST00000573519 C9JVG2 144 aa11.42□□□□□ -0.58
NPLOC4-213ENST00000573519 GTPBP1O00178 669 aaKnown RBP11.42□□□□□ -0.58
NPLOC4-213ENST00000573519 MSTNO14793 375 aa11.42□□□□□ -0.58
NPLOC4-213ENST00000573519 HDAC3O15379 428 aa11.42□□□□□ -0.58
NPLOC4-213ENST00000573519 SOX30O94993 753 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms