RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 MRPS18AQ9NVS2 196 aaKnown RBP16.79■□□□□ 0.28
SMPD3-211ENST00000568373 ZNF223Q9UK11 482 aaPredicted RBP16.79■□□□□ 0.28
SMPD3-211ENST00000568373 ARHGAP33O14559 1287 aa16.78■□□□□ 0.28
SMPD3-211ENST00000568373 NUDT21O43809 227 aaKnown RBP16.78■□□□□ 0.28
SMPD3-211ENST00000568373 RAB36O95755 333 aa16.78■□□□□ 0.28
SMPD3-211ENST00000568373 PTNP21246 168 aa16.78■□□□□ 0.28
SMPD3-211ENST00000568373 FUT7Q11130 342 aa16.78■□□□□ 0.28
SMPD3-211ENST00000568373 TIMM50Q3ZCQ8 353 aa16.78■□□□□ 0.28
SMPD3-211ENST00000568373 KLHL22Q53GT1 634 aa16.78■□□□□ 0.28
SMPD3-211ENST00000568373 C16orf87Q6PH81 154 aa16.78■□□□□ 0.28
SMPD3-211ENST00000568373 NPSR1Q6W5P4 371 aa16.78■□□□□ 0.28
SMPD3-211ENST00000568373 ARHGAP22Q7Z5H3 698 aa16.78■□□□□ 0.28
SMPD3-211ENST00000568373 GRAMD2AQ8IUY3 354 aa16.78■□□□□ 0.28
SMPD3-211ENST00000568373 ZNF614Q8N883 585 aa16.78■□□□□ 0.28
SMPD3-211ENST00000568373 ANKK1Q8NFD2 765 aa16.78■□□□□ 0.28
SMPD3-211ENST00000568373 CNOT9Q92600 299 aaKnown RBP16.78■□□□□ 0.28
SMPD3-211ENST00000568373 DUSP15Q9H1R2 295 aaPredicted RBP16.78■□□□□ 0.28
SMPD3-211ENST00000568373 HMG20AQ9NP66 347 aa16.78■□□□□ 0.28
SMPD3-211ENST00000568373 AKIP1Q9NQ31 210 aa16.78■□□□□ 0.28
SMPD3-211ENST00000568373 FBXO8Q9NRD0 319 aa16.78■□□□□ 0.28
SMPD3-211ENST00000568373 ERVK-19Q9WJR5 959 aa16.78■□□□□ 0.28
SMPD3-211ENST00000568373 IGHV1OR21-1A0A087WYE8 117 aa16.77■□□□□ 0.28
SMPD3-211ENST00000568373 KDM4EB2RXH2 506 aaPredicted RBP16.77■□□□□ 0.28
SMPD3-211ENST00000568373 SURF4O15260 269 aa16.77■□□□□ 0.28
SMPD3-211ENST00000568373 DCNP07585 359 aaKnown RBP16.77■□□□□ 0.28
SMPD3-211ENST00000568373 IDUAP35475 653 aa16.77■□□□□ 0.28
SMPD3-211ENST00000568373 PGDP52209 483 aa16.77■□□□□ 0.28
SMPD3-211ENST00000568373 ZNF846Q147U1 533 aa16.77■□□□□ 0.28
SMPD3-211ENST00000568373 SSX1Q16384 188 aa16.77■□□□□ 0.28
SMPD3-211ENST00000568373 PGGHGQ32M88 737 aa16.77■□□□□ 0.28
SMPD3-211ENST00000568373 MINDY4Q4G0A6 757 aa16.77■□□□□ 0.28
SMPD3-211ENST00000568373 WDR45BQ5MNZ6 344 aa16.77■□□□□ 0.28
SMPD3-211ENST00000568373 ZNF613Q6PF04 617 aa16.77■□□□□ 0.28
SMPD3-211ENST00000568373 CARFQ8N187 725 aa16.77■□□□□ 0.28
SMPD3-211ENST00000568373 RCBTB1Q8NDN9 531 aa16.77■□□□□ 0.28
SMPD3-211ENST00000568373 KBTBD8Q8NFY9 601 aa16.77■□□□□ 0.28
SMPD3-211ENST00000568373 OR6Q1Q8NGQ2 317 aa16.77■□□□□ 0.28
SMPD3-211ENST00000568373 S100ZQ8WXG8 99 aa16.77■□□□□ 0.28
SMPD3-211ENST00000568373 CHCHD6Q9BRQ6 235 aa16.77■□□□□ 0.28
SMPD3-211ENST00000568373 CENPOQ9BU64 300 aa16.77■□□□□ 0.28
SMPD3-211ENST00000568373 Q9N2J8 555 aa16.77■□□□□ 0.28
SMPD3-211ENST00000568373 MED17Q9NVC6 651 aa16.77■□□□□ 0.28
SMPD3-211ENST00000568373 CABIN1Q9Y6J0 2220 aa16.77■□□□□ 0.28
SMPD3-211ENST00000568373 ASXL3Q9C0F0 2248 aa16.77■□□□□ 0.28
SMPD3-211ENST00000568373 IRGMA1A4Y4 181 aa16.77■□□□□ 0.27
SMPD3-211ENST00000568373 H3BMH7 237 aa16.77■□□□□ 0.27
SMPD3-211ENST00000568373 CH25HO95992 272 aa16.77■□□□□ 0.27
SMPD3-211ENST00000568373 GAS1P54826 345 aa16.77■□□□□ 0.27
SMPD3-211ENST00000568373 ZP2Q05996 745 aa16.77■□□□□ 0.27
SMPD3-211ENST00000568373 RAB40BQ12829 278 aa16.77■□□□□ 0.27
SMPD3-211ENST00000568373 SERTAD2Q14140 314 aa16.77■□□□□ 0.27
SMPD3-211ENST00000568373 SOWAHCQ53LP3 525 aaPredicted RBP16.77■□□□□ 0.27
SMPD3-211ENST00000568373 OR2T33Q8NG76 320 aa16.77■□□□□ 0.27
SMPD3-211ENST00000568373 PFN4Q8NHR9 129 aa16.77■□□□□ 0.27
SMPD3-211ENST00000568373 C16orf52Q8NHV5 167 aa16.77■□□□□ 0.27
SMPD3-211ENST00000568373 RNF217Q8TC41 542 aa16.77■□□□□ 0.27
SMPD3-211ENST00000568373 PELOQ9BRX2 385 aaKnown RBP16.77■□□□□ 0.27
SMPD3-211ENST00000568373 WDR12Q9GZL7 423 aaKnown RBP16.77■□□□□ 0.27
SMPD3-211ENST00000568373 OR10A5Q9H207 317 aa16.77■□□□□ 0.27
SMPD3-211ENST00000568373 TMEM27Q9HBJ8 222 aa16.77■□□□□ 0.27
SMPD3-211ENST00000568373 HHATLQ9HCP6 504 aa16.77■□□□□ 0.27
SMPD3-211ENST00000568373 CUTCQ9NTM9 273 aa16.77■□□□□ 0.27
SMPD3-211ENST00000568373 MAU2Q9Y6X3 613 aa16.77■□□□□ 0.27
SMPD3-211ENST00000568373 MYL12BO14950 172 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 OR2B3O76000 313 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 IFNA16P05015 189 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 CT45A8P0DMV1 189 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 CT45A9P0DMV2 189 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 GALNSP34059 522 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 MTNR1AP48039 350 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 HSD11B2P80365 405 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 PRKCDQ05655 676 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 DMWDQ09019 674 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 C1DQ13901 141 aaKnown RBP16.76■□□□□ 0.27
SMPD3-211ENST00000568373 C11orf91Q3C1V1 193 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 CT45A2Q5DJT8 189 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 C3orf38Q5JPI3 329 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 SLC35F3Q8IY50 421 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 SLC25A45Q8N413 288 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 TMCO5AQ8N6Q1 288 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 RNFT2Q96EX2 444 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 SAMD8Q96LT4 415 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 G6PC3Q9BUM1 346 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 DPH1Q9BZG8 443 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 FGF20Q9NP95 211 aaPredicted RBP16.76■□□□□ 0.27
SMPD3-211ENST00000568373 ENAMQ9NRM1 1142 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 C20orf141Q9NUB4 165 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 SIDT1Q9NXL6 827 aaKnown RBP16.76■□□□□ 0.27
SMPD3-211ENST00000568373 DNAJB12Q9NXW2 375 aaKnown RBP16.76■□□□□ 0.27
SMPD3-211ENST00000568373 IL20RAQ9UHF4 553 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 A0A1B0GVT2 93 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 UNC119BA6NIH7 251 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 NPIPB9F8W1W9 429 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 DUX1O43812 170 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 HBQ1P09105 142 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 IFI30P13284 250 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 GLB1P16278 677 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 MAKP20794 623 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 GCGRP47871 477 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 SEPHS1P49903 392 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms