RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 NDRG3Q9UGV2 375 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 ZNF175Q9Y473 711 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 AP4B1Q9Y6B7 739 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 CUBNO60494 3623 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 A0A087WZY1 265 aa14.58□□□□□ -0.08
DDX55-212ENST00000544738 A0A1W2PRB8 838 aa14.58□□□□□ -0.08
DDX55-212ENST00000544738 H3BML4 177 aa14.58□□□□□ -0.08
DDX55-212ENST00000544738 SCAMP2O15127 329 aaKnown RBP14.58□□□□□ -0.08
DDX55-212ENST00000544738 KCNK2O95069 426 aa14.58□□□□□ -0.08
DDX55-212ENST00000544738 SLU7O95391 586 aaKnown RBP14.58□□□□□ -0.08
DDX55-212ENST00000544738 OXSR1O95747 527 aaPredicted RBP14.58□□□□□ -0.08
DDX55-212ENST00000544738 ACP2P11117 423 aa14.58□□□□□ -0.08
DDX55-212ENST00000544738 HPGDP15428 266 aa14.58□□□□□ -0.08
DDX55-212ENST00000544738 FGFBP1Q14512 234 aa14.58□□□□□ -0.08
DDX55-212ENST00000544738 APOOLQ6UXV4 268 aa14.58□□□□□ -0.08
DDX55-212ENST00000544738 MISPQ8IVT2 679 aa14.58□□□□□ -0.08
DDX55-212ENST00000544738 PINK1Q9BXM7 581 aa14.58□□□□□ -0.08
DDX55-212ENST00000544738 UBTD1Q9HAC8 227 aa14.58□□□□□ -0.08
DDX55-212ENST00000544738 UBQLN4Q9NRR5 601 aa14.58□□□□□ -0.08
DDX55-212ENST00000544738 ZCCHC3Q9NUD5 404 aaKnown RBP14.58□□□□□ -0.08
DDX55-212ENST00000544738 GIN1Q9NXP7 522 aa14.58□□□□□ -0.08
DDX55-212ENST00000544738 MED12LQ86YW9 2145 aa14.57□□□□□ -0.08
DDX55-212ENST00000544738 SEC14L5O43304 696 aa14.57□□□□□ -0.08
DDX55-212ENST00000544738 BPGMP07738 259 aa14.57□□□□□ -0.08
DDX55-212ENST00000544738 FCGR2AP12318 317 aa14.57□□□□□ -0.08
DDX55-212ENST00000544738 NID1P14543 1247 aa14.57□□□□□ -0.08
DDX55-212ENST00000544738 ZNF17P17021 662 aa14.57□□□□□ -0.08
DDX55-212ENST00000544738 SUCLG1P53597 346 aaKnown RBP14.57□□□□□ -0.08
DDX55-212ENST00000544738 CLDN15P56746 228 aa14.57□□□□□ -0.08
DDX55-212ENST00000544738 MAD2L1Q13257 205 aaPredicted RBP14.57□□□□□ -0.08
DDX55-212ENST00000544738 ACKR1Q16570 336 aa14.57□□□□□ -0.08
DDX55-212ENST00000544738 DUSP5Q16690 384 aa14.57□□□□□ -0.08
DDX55-212ENST00000544738 LSM12Q3MHD2 195 aaKnown RBP14.57□□□□□ -0.08
DDX55-212ENST00000544738 C6orf136Q5SQH8 315 aa14.57□□□□□ -0.08
DDX55-212ENST00000544738 CPTPQ5TA50 214 aa14.57□□□□□ -0.08
DDX55-212ENST00000544738 METTL25Q8N6Q8 603 aa14.57□□□□□ -0.08
DDX55-212ENST00000544738 COX18Q8N8Q8 333 aa14.57□□□□□ -0.08
DDX55-212ENST00000544738 CNEP1R1Q8N9A8 125 aa14.57□□□□□ -0.08
DDX55-212ENST00000544738 FNDC5Q8NAU1 212 aa14.57□□□□□ -0.08
DDX55-212ENST00000544738 OR7A2PQ8NGA2 310 aa14.57□□□□□ -0.08
DDX55-212ENST00000544738 ACTRT2Q8TDY3 377 aa14.57□□□□□ -0.08
DDX55-212ENST00000544738 JADE3Q92613 823 aa14.57□□□□□ -0.08
DDX55-212ENST00000544738 STARD4Q96DR4 205 aa14.57□□□□□ -0.08
DDX55-212ENST00000544738 FAM120BQ96EK7 910 aaKnown RBP14.57□□□□□ -0.08
DDX55-212ENST00000544738 STACQ99469 402 aa14.57□□□□□ -0.08
DDX55-212ENST00000544738 BTBD2Q9BX70 525 aa14.57□□□□□ -0.08
DDX55-212ENST00000544738 DUSP22Q9NRW4 184 aa14.57□□□□□ -0.08
DDX55-212ENST00000544738 PAQR5Q9NXK6 330 aaPredicted RBP14.57□□□□□ -0.08
DDX55-212ENST00000544738 C6orf203Q9P0P8 240 aaPredicted RBP14.57□□□□□ -0.08
DDX55-212ENST00000544738 ZDHHC2Q9UIJ5 367 aa14.57□□□□□ -0.08
DDX55-212ENST00000544738 A0A1W2PQD3 144 aa14.56□□□□□ -0.08
DDX55-212ENST00000544738 SCDO00767 359 aa14.56□□□□□ -0.08
DDX55-212ENST00000544738 TYROBPO43914 113 aa14.56□□□□□ -0.08
DDX55-212ENST00000544738 SMNDC1O75940 238 aaKnown RBP eCLIP14.56□□□□□ -0.08
DDX55-212ENST00000544738 HMGN2P05204 90 aaKnown RBP14.56□□□□□ -0.08
DDX55-212ENST00000544738 LAMP1P11279 417 aa14.56□□□□□ -0.08
DDX55-212ENST00000544738 PRPS1L1P21108 318 aa14.56□□□□□ -0.08
DDX55-212ENST00000544738 FPR1P21462 350 aa14.56□□□□□ -0.08
DDX55-212ENST00000544738 ZNF41P51814 821 aaPredicted RBP14.56□□□□□ -0.08
DDX55-212ENST00000544738 CLDN20P56880 219 aa14.56□□□□□ -0.08
DDX55-212ENST00000544738 POU6F2P78424 691 aaPredicted RBP14.56□□□□□ -0.08
DDX55-212ENST00000544738 PON3Q15166 354 aa14.56□□□□□ -0.08
DDX55-212ENST00000544738 SGCBQ16585 318 aa14.56□□□□□ -0.08
DDX55-212ENST00000544738 TMEM44Q2T9K0 475 aa14.56□□□□□ -0.08
DDX55-212ENST00000544738 EXOSC6Q5RKV6 272 aaKnown RBP14.56□□□□□ -0.08
DDX55-212ENST00000544738 IL23RQ5VWK5 629 aa14.56□□□□□ -0.08
DDX55-212ENST00000544738 FIGNL1Q6PIW4 674 aa14.56□□□□□ -0.08
DDX55-212ENST00000544738 GALNT10Q86SR1 603 aa14.56□□□□□ -0.08
DDX55-212ENST00000544738 NUDCD3Q8IVD9 361 aa14.56□□□□□ -0.08
DDX55-212ENST00000544738 MREGQ8N565 214 aa14.56□□□□□ -0.08
DDX55-212ENST00000544738 OR5M1Q8NGP8 315 aa14.56□□□□□ -0.08
DDX55-212ENST00000544738 PSMA8Q8TAA3 256 aa14.56□□□□□ -0.08
DDX55-212ENST00000544738 PPP1R14CQ8TAE6 165 aa14.56□□□□□ -0.08
DDX55-212ENST00000544738 FBXO30Q8TB52 745 aa14.56□□□□□ -0.08
DDX55-212ENST00000544738 OR5P2Q8WZ92 322 aa14.56□□□□□ -0.08
DDX55-212ENST00000544738 FIG4Q92562 907 aa14.56□□□□□ -0.08
DDX55-212ENST00000544738 TUBGCP3Q96CW5 907 aa14.56□□□□□ -0.08
DDX55-212ENST00000544738 COQ8BQ96D53 544 aa14.56□□□□□ -0.08
DDX55-212ENST00000544738 CHMP6Q96FZ7 201 aa14.56□□□□□ -0.08
DDX55-212ENST00000544738 PGM2Q96G03 612 aa14.56□□□□□ -0.08
DDX55-212ENST00000544738 C16orf58Q96GQ5 468 aa14.56□□□□□ -0.08
DDX55-212ENST00000544738 C3orf30Q96M34 536 aa14.56□□□□□ -0.08
DDX55-212ENST00000544738 ZIM3Q96PE6 472 aa14.56□□□□□ -0.08
DDX55-212ENST00000544738 SLC39A3Q9BRY0 314 aa14.56□□□□□ -0.08
DDX55-212ENST00000544738 PIGUQ9H490 435 aa14.56□□□□□ -0.08
DDX55-212ENST00000544738 RNF122Q9H9V4 155 aa14.56□□□□□ -0.08
DDX55-212ENST00000544738 SIRT3Q9NTG7 399 aaPredicted RBP14.56□□□□□ -0.08
DDX55-212ENST00000544738 GIMAP2Q9UG22 337 aa14.56□□□□□ -0.08
DDX55-212ENST00000544738 VDAC3Q9Y277 283 aa14.56□□□□□ -0.08
DDX55-212ENST00000544738 SNX8Q9Y5X2 465 aa14.56□□□□□ -0.08
DDX55-212ENST00000544738 H0YC42 278 aa14.55□□□□□ -0.08
DDX55-212ENST00000544738 CTIFO43310 598 aaKnown RBP14.55□□□□□ -0.08
DDX55-212ENST00000544738 GMFGO60234 142 aa14.55□□□□□ -0.08
DDX55-212ENST00000544738 SKAP2O75563 359 aaPredicted RBP14.55□□□□□ -0.08
DDX55-212ENST00000544738 KRT16P08779 473 aa14.55□□□□□ -0.08
DDX55-212ENST00000544738 CREB1P16220 341 aa14.55□□□□□ -0.08
DDX55-212ENST00000544738 EFNA1P20827 205 aaPredicted RBP14.55□□□□□ -0.08
DDX55-212ENST00000544738 ATP6V1C1P21283 382 aa14.55□□□□□ -0.08
DDX55-212ENST00000544738 ARRB2P32121 409 aa14.55□□□□□ -0.08
DDX55-212ENST00000544738 CPOXP36551 454 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms