RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 WIPI2Q9Y4P8 454 aa5.56□□□□□ -1.52
HDAC3-206ENST00000471968 GPC6Q9Y625 555 aaPredicted RBP5.56□□□□□ -1.52
HDAC3-206ENST00000471968 VPS13DQ5THJ4 4388 aa5.56□□□□□ -1.52
HDAC3-206ENST00000471968 FAT2Q9NYQ8 4349 aa5.55□□□□□ -1.52
HDAC3-206ENST00000471968 IGHV3-15A0A0B4J1V0 119 aa5.55□□□□□ -1.52
HDAC3-206ENST00000471968 OR6C70A6NIJ9 312 aa5.55□□□□□ -1.52
HDAC3-206ENST00000471968 E5RI56 91 aa5.55□□□□□ -1.52
HDAC3-206ENST00000471968 M0R233 179 aa5.55□□□□□ -1.52
HDAC3-206ENST00000471968 ACOX3O15254 700 aa5.55□□□□□ -1.52
HDAC3-206ENST00000471968 GSNP06396 782 aa5.55□□□□□ -1.52
HDAC3-206ENST00000471968 CT62P0C5K7 136 aa5.55□□□□□ -1.52
HDAC3-206ENST00000471968 GABRA5P31644 462 aa5.55□□□□□ -1.52
HDAC3-206ENST00000471968 GALNSP34059 522 aa5.55□□□□□ -1.52
HDAC3-206ENST00000471968 MRPS11P82912 194 aaKnown RBP5.55□□□□□ -1.52
HDAC3-206ENST00000471968 TMEM44Q2T9K0 475 aa5.55□□□□□ -1.52
HDAC3-206ENST00000471968 GLYR1Q49A26 553 aaPredicted RBP5.55□□□□□ -1.52
HDAC3-206ENST00000471968 C9orf135Q5VTT2 229 aa5.55□□□□□ -1.52
HDAC3-206ENST00000471968 FBXW9Q5XUX1 488 aa5.55□□□□□ -1.52
HDAC3-206ENST00000471968 FRG2Q64ET8 278 aa5.55□□□□□ -1.52
HDAC3-206ENST00000471968 REP15Q6BDI9 236 aa5.55□□□□□ -1.52
HDAC3-206ENST00000471968 TMPRSS11BQ86T26 416 aa5.55□□□□□ -1.52
HDAC3-206ENST00000471968 FMR1NBQ8N0W7 255 aaPredicted RBP5.55□□□□□ -1.52
HDAC3-206ENST00000471968 KLHDC1Q8N7A1 406 aa5.55□□□□□ -1.52
HDAC3-206ENST00000471968 TMBIM1Q969X1 311 aa5.55□□□□□ -1.52
HDAC3-206ENST00000471968 CPNE4Q96A23 557 aaPredicted RBP5.55□□□□□ -1.52
HDAC3-206ENST00000471968 HAUS1Q96CS2 278 aa5.55□□□□□ -1.52
HDAC3-206ENST00000471968 ZNF778Q96MU6 729 aa5.55□□□□□ -1.52
HDAC3-206ENST00000471968 ANKRD27Q96NW4 1050 aa5.55□□□□□ -1.52
HDAC3-206ENST00000471968 BIRC8Q96P09 236 aa5.55□□□□□ -1.52
HDAC3-206ENST00000471968 QKIQ96PU8 341 aaKnown RBP eCLIP5.55□□□□□ -1.52
HDAC3-206ENST00000471968 KATNB1Q9BVA0 655 aa5.55□□□□□ -1.52
HDAC3-206ENST00000471968 PCDHAC1Q9H158 963 aa5.55□□□□□ -1.52
HDAC3-206ENST00000471968 ACSS3Q9H6R3 686 aa5.55□□□□□ -1.52
HDAC3-206ENST00000471968 ZNF442Q9H7R0 627 aa5.55□□□□□ -1.52
HDAC3-206ENST00000471968 TMEM165Q9HC07 324 aa5.55□□□□□ -1.52
HDAC3-206ENST00000471968 SLC17A5Q9NRA2 495 aa5.55□□□□□ -1.52
HDAC3-206ENST00000471968 VDAC3Q9Y277 283 aa5.55□□□□□ -1.52
HDAC3-206ENST00000471968 LSM4Q9Y4Z0 139 aaKnown RBP5.55□□□□□ -1.52
HDAC3-206ENST00000471968 DNAH2Q9P225 4427 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 WASHC1A8K0Z3 465 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 ZNF487B1APH4 448 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 POC1B-GALNT4F8VUJ3 575 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 CD3EAPO15446 510 aaKnown RBP5.54□□□□□ -1.52
HDAC3-206ENST00000471968 PHGDHO43175 533 aaKnown RBP5.54□□□□□ -1.52
HDAC3-206ENST00000471968 SYNGR3O43761 229 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 DUS4LO95620 317 aaKnown RBP5.54□□□□□ -1.52
HDAC3-206ENST00000471968 IGHMP01871 453 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 CCDC172P0C7W6 258 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 GZMAP12544 262 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 EPB42P16452 691 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 RBL1P28749 1068 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 CALCRP30988 508 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 ALDH3B1P43353 468 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 SEC24CP53992 1094 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 RAC1P63000 192 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 TSTD2Q5T7W7 516 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 SLC35E4Q6ICL7 350 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 CYHR1Q6ZMK1 362 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 FRRS1Q6ZNA5 592 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 IKBIPQ70UQ0 350 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 RHOT2Q8IXI1 618 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 GALNT4Q8N4A0 578 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 RPP25LQ8N5L8 163 aaKnown RBP5.54□□□□□ -1.52
HDAC3-206ENST00000471968 ACOT4Q8N9L9 421 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 NUP37Q8NFH4 326 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 OR4F15Q8NGB8 312 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 ANKRD7Q92527 254 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 TANKQ92844 425 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 UPRTQ96BW1 309 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 SLC38A2Q96QD8 506 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 ZNF300Q96RE9 604 aaPredicted RBP5.54□□□□□ -1.52
HDAC3-206ENST00000471968 NPAS1Q99742 590 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 PSD2Q9BQI7 771 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 MS4A5Q9H3V2 200 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 CXorf21Q9HAI6 301 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 PELI2Q9HAT8 420 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 BCO1Q9HAY6 547 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 TIGARQ9NQ88 270 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 PRDM7Q9NQW5 492 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 ASB6Q9NWX5 421 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 KLHL9Q9P2J3 617 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 ADAMTS6Q9UKP5 1117 aa5.54□□□□□ -1.52
HDAC3-206ENST00000471968 SRRM2Q9UQ35 2752 aaKnown RBP5.53□□□□□ -1.52
HDAC3-206ENST00000471968 A0A1W2PS29 197 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 ISPDA4D126 451 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 FAM187AA6NFU0 413 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 AGAP5A6NIR3 686 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 CXorf49A8MYA2 514 aaPredicted RBP5.53□□□□□ -1.52
HDAC3-206ENST00000471968 RTCAO00442 366 aaKnown RBP5.53□□□□□ -1.52
HDAC3-206ENST00000471968 GPR75O95800 540 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 TBX6O95947 436 aaPredicted RBP5.53□□□□□ -1.52
HDAC3-206ENST00000471968 WNT11O96014 354 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 ITGA5P08648 1049 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 MPC1LP0DKB6 136 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 CD28P10747 220 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 ME2P23368 584 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 CHATP28329 748 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 CD80P33681 288 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 SFTPDP35247 375 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 GATA4P43694 442 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms