RNA–Protein interactions for RNA: ENST00000436289.6

NELFE-204, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 906 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-204ENST00000436289 HEPACAMQ14CZ8 416 aa13.24□□□□□ -0.29
NELFE-204ENST00000436289 IQCCQ4KMZ1 466 aa13.24□□□□□ -0.29
NELFE-204ENST00000436289 FAM180BQ6P0A1 224 aa13.24□□□□□ -0.29
NELFE-204ENST00000436289 FCRLAQ7L513 359 aa13.24□□□□□ -0.29
NELFE-204ENST00000436289 FAM9CQ8IZT9 166 aa13.24□□□□□ -0.29
NELFE-204ENST00000436289 CDYL2Q8N8U2 506 aa13.24□□□□□ -0.29
NELFE-204ENST00000436289 PYROXD1Q8WU10 500 aa13.24□□□□□ -0.29
NELFE-204ENST00000436289 KCTD4Q8WVF5 259 aa13.24□□□□□ -0.29
NELFE-204ENST00000436289 HTRA1Q92743 480 aa13.24□□□□□ -0.29
NELFE-204ENST00000436289 HPS1Q92902 700 aa13.24□□□□□ -0.29
NELFE-204ENST00000436289 BCO1Q9HAY6 547 aa13.24□□□□□ -0.29
NELFE-204ENST00000436289 MYNNQ9NPC7 610 aa13.24□□□□□ -0.29
NELFE-204ENST00000436289 KLHL9Q9P2J3 617 aa13.24□□□□□ -0.29
NELFE-204ENST00000436289 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.24□□□□□ -0.29
NELFE-204ENST00000436289 A0A1W2PRB8 838 aa13.23□□□□□ -0.29
NELFE-204ENST00000436289 SERINC4A6NH21 518 aa13.23□□□□□ -0.29
NELFE-204ENST00000436289 LYZL6O75951 148 aa13.23□□□□□ -0.29
NELFE-204ENST00000436289 KCNH1O95259 989 aa13.23□□□□□ -0.29
NELFE-204ENST00000436289 UTS2O95399 124 aa13.23□□□□□ -0.29
NELFE-204ENST00000436289 NGFRP08138 427 aa13.23□□□□□ -0.29
NELFE-204ENST00000436289 CD40P25942 277 aa13.23□□□□□ -0.29
NELFE-204ENST00000436289 APOBEC3AP31941 199 aaPredicted RBP13.23□□□□□ -0.29
NELFE-204ENST00000436289 MANFP55145 182 aaKnown RBP13.23□□□□□ -0.29
NELFE-204ENST00000436289 GGTA1PQ4G0N0 100 aa13.23□□□□□ -0.29
NELFE-204ENST00000436289 PRR31Q5SQ13 230 aa13.23□□□□□ -0.29
NELFE-204ENST00000436289 C1QTNF12Q5T7M4 302 aa13.23□□□□□ -0.29
NELFE-204ENST00000436289 KLC3Q6P597 504 aa13.23□□□□□ -0.29
NELFE-204ENST00000436289 MISPQ8IVT2 679 aa13.23□□□□□ -0.29
NELFE-204ENST00000436289 ZBED8Q8IZ13 594 aa13.23□□□□□ -0.29
NELFE-204ENST00000436289 OR7G2Q8NG99 324 aa13.23□□□□□ -0.29
NELFE-204ENST00000436289 OR2W6PQ8NHA6 318 aa13.23□□□□□ -0.29
NELFE-204ENST00000436289 GCDHQ92947 438 aaPredicted RBP13.23□□□□□ -0.29
NELFE-204ENST00000436289 NXNL1Q96CM4 212 aa13.23□□□□□ -0.29
NELFE-204ENST00000436289 RNF145Q96MT1 663 aa13.23□□□□□ -0.29
NELFE-204ENST00000436289 FKRPQ9H9S5 495 aa13.23□□□□□ -0.29
NELFE-204ENST00000436289 SLC35C2Q9NQQ7 365 aa13.23□□□□□ -0.29
NELFE-204ENST00000436289 MED17Q9NVC6 651 aa13.23□□□□□ -0.29
NELFE-204ENST00000436289 FLRT3Q9NZU0 649 aa13.23□□□□□ -0.29
NELFE-204ENST00000436289 TMEM89A2RUT3 159 aa13.22□□□□□ -0.29
NELFE-204ENST00000436289 CXorf49A8MYA2 514 aaPredicted RBP13.22□□□□□ -0.29
NELFE-204ENST00000436289 ALG1L2C9J202 215 aa13.22□□□□□ -0.29
NELFE-204ENST00000436289 OR7A17O14581 309 aa13.22□□□□□ -0.29
NELFE-204ENST00000436289 RGS14O43566 566 aa13.22□□□□□ -0.29
NELFE-204ENST00000436289 NME6O75414 186 aaPredicted RBP13.22□□□□□ -0.29
NELFE-204ENST00000436289 NTN1O95631 604 aa13.22□□□□□ -0.29
NELFE-204ENST00000436289 OPN1LWP04000 364 aa13.22□□□□□ -0.29
NELFE-204ENST00000436289 ELK4P28324 431 aa13.22□□□□□ -0.29
NELFE-204ENST00000436289 GSTM5P46439 218 aa13.22□□□□□ -0.29
NELFE-204ENST00000436289 ACTG1P63261 375 aa13.22□□□□□ -0.29
NELFE-204ENST00000436289 PLPPR5Q32ZL2 321 aa13.22□□□□□ -0.29
NELFE-204ENST00000436289 DEF8Q6ZN54 512 aa13.22□□□□□ -0.29
NELFE-204ENST00000436289 CEP112Q8N8E3 955 aa13.22□□□□□ -0.29
NELFE-204ENST00000436289 FOXN4Q96NZ1 517 aa13.22□□□□□ -0.29
NELFE-204ENST00000436289 CDK15Q96Q40 435 aa13.22□□□□□ -0.29
NELFE-204ENST00000436289 TRMOQ9BU70 441 aa13.22□□□□□ -0.29
NELFE-204ENST00000436289 OCEL1Q9H607 264 aa13.22□□□□□ -0.29
NELFE-204ENST00000436289 NPAP1Q9NZP6 1156 aa13.22□□□□□ -0.29
NELFE-204ENST00000436289 VPS29Q9UBQ0 182 aa13.22□□□□□ -0.29
NELFE-204ENST00000436289 MCM8Q9UJA3 840 aa13.22□□□□□ -0.29
NELFE-204ENST00000436289 TMCO1Q9UM00 188 aa13.22□□□□□ -0.29
NELFE-204ENST00000436289 SNX6Q9UNH7 406 aa13.22□□□□□ -0.29
NELFE-204ENST00000436289 C19orf53Q9UNZ5 99 aaPredicted RBP13.22□□□□□ -0.29
NELFE-204ENST00000436289 IGHV4-61A0A0C4DH41 118 aa13.21□□□□□ -0.29
NELFE-204ENST00000436289 FAM159BA6NKW6 160 aa13.21□□□□□ -0.29
NELFE-204ENST00000436289 FAM157AC9JC47 383 aa13.21□□□□□ -0.29
NELFE-204ENST00000436289 PIAS1O75925 651 aa13.21□□□□□ -0.29
NELFE-204ENST00000436289 SEC31AO94979 1220 aaKnown RBP13.21□□□□□ -0.29
NELFE-204ENST00000436289 GSTA2P09210 222 aa13.21□□□□□ -0.29
NELFE-204ENST00000436289 CREB1P16220 341 aa13.21□□□□□ -0.29
NELFE-204ENST00000436289 COX5AP20674 150 aa13.21□□□□□ -0.29
NELFE-204ENST00000436289 CDC25BP30305 580 aa13.21□□□□□ -0.29
NELFE-204ENST00000436289 FASTKD3Q14CZ7 662 aaKnown RBP13.21□□□□□ -0.29
NELFE-204ENST00000436289 FAM216AQ8WUB2 273 aa13.21□□□□□ -0.29
NELFE-204ENST00000436289 SELENOMQ8WWX9 145 aa13.21□□□□□ -0.29
NELFE-204ENST00000436289 EXOSC8Q96B26 276 aaKnown RBP13.21□□□□□ -0.29
NELFE-204ENST00000436289 C3orf49Q96BT1 292 aa13.21□□□□□ -0.29
NELFE-204ENST00000436289 BBS4Q96RK4 519 aa13.21□□□□□ -0.29
NELFE-204ENST00000436289 LMF2Q9BU23 707 aaKnown RBP13.21□□□□□ -0.29
NELFE-204ENST00000436289 FBXO9Q9UK97 447 aaPredicted RBP13.21□□□□□ -0.29
NELFE-204ENST00000436289 ZNF724A8MTY0 619 aa13.2□□□□□ -0.3
NELFE-204ENST00000436289 KIF2AO00139 706 aaPredicted RBP13.2□□□□□ -0.3
NELFE-204ENST00000436289 GMFGO60234 142 aa13.2□□□□□ -0.3
NELFE-204ENST00000436289 IFI6P09912 130 aa13.2□□□□□ -0.3
NELFE-204ENST00000436289 CTAGE8P0CG41 777 aa13.2□□□□□ -0.3
NELFE-204ENST00000436289 COL6A2P12110 1019 aa13.2□□□□□ -0.3
NELFE-204ENST00000436289 HSD3B1P14060 373 aa13.2□□□□□ -0.3
NELFE-204ENST00000436289 IGHV1-2P23083 117 aa13.2□□□□□ -0.3
NELFE-204ENST00000436289 HSD3B2P26439 372 aa13.2□□□□□ -0.3
NELFE-204ENST00000436289 LCN1P31025 176 aa13.2□□□□□ -0.3
NELFE-204ENST00000436289 RAC3P60763 192 aa13.2□□□□□ -0.3
NELFE-204ENST00000436289 SGO1Q5FBB7 561 aa13.2□□□□□ -0.3
NELFE-204ENST00000436289 APOOLQ6UXV4 268 aa13.2□□□□□ -0.3
NELFE-204ENST00000436289 C3orf62Q6ZUJ4 267 aa13.2□□□□□ -0.3
NELFE-204ENST00000436289 CMC1Q7Z7K0 106 aa13.2□□□□□ -0.3
NELFE-204ENST00000436289 CTAGE4Q8IX94 777 aa13.2□□□□□ -0.3
NELFE-204ENST00000436289 MMGT1Q8N4V1 131 aa13.2□□□□□ -0.3
NELFE-204ENST00000436289 C1orf52Q8N6N3 182 aaKnown RBP13.2□□□□□ -0.3
NELFE-204ENST00000436289 LINC01356Q8N9X3 169 aa13.2□□□□□ -0.3
NELFE-204ENST00000436289 ZNF418Q8TF45 676 aaPredicted RBP13.2□□□□□ -0.3
NELFE-204ENST00000436289 TMEM185BQ9H7F4 350 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms