RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 STK32CQ86UX6 486 aa13.54□□□□□ -0.24
CSNK1E-208ENST00000431611 WFDC8Q8IUA0 241 aa13.54□□□□□ -0.24
CSNK1E-208ENST00000431611 MISPQ8IVT2 679 aa13.54□□□□□ -0.24
CSNK1E-208ENST00000431611 CEP112Q8N8E3 955 aa13.54□□□□□ -0.24
CSNK1E-208ENST00000431611 CLHC1Q8NHS4 586 aa13.54□□□□□ -0.24
CSNK1E-208ENST00000431611 TMEM171Q8WVE6 324 aa13.54□□□□□ -0.24
CSNK1E-208ENST00000431611 GIMAP5Q96F15 307 aa13.54□□□□□ -0.24
CSNK1E-208ENST00000431611 FCRL1Q96LA6 429 aa13.54□□□□□ -0.24
CSNK1E-208ENST00000431611 TMEM185BQ9H7F4 350 aa13.54□□□□□ -0.24
CSNK1E-208ENST00000431611 UBQLN4Q9NRR5 601 aa13.54□□□□□ -0.24
CSNK1E-208ENST00000431611 ACSS1Q9NUB1 689 aaPredicted RBP13.54□□□□□ -0.24
CSNK1E-208ENST00000431611 A0A0J9YW62 118 aa13.53□□□□□ -0.24
CSNK1E-208ENST00000431611 AZIN1O14977 448 aa13.53□□□□□ -0.24
CSNK1E-208ENST00000431611 CNOT4O95628 575 aaKnown RBP13.53□□□□□ -0.24
CSNK1E-208ENST00000431611 TUBBP07437 444 aa13.53□□□□□ -0.24
CSNK1E-208ENST00000431611 NEFHP12036 1026 aa13.53□□□□□ -0.24
CSNK1E-208ENST00000431611 LCN1P31025 176 aa13.53□□□□□ -0.24
CSNK1E-208ENST00000431611 FRKP42685 505 aaPredicted RBP13.53□□□□□ -0.24
CSNK1E-208ENST00000431611 SERPINB4P48594 390 aa13.53□□□□□ -0.24
CSNK1E-208ENST00000431611 PDE7AQ13946 482 aa13.53□□□□□ -0.24
CSNK1E-208ENST00000431611 RFTN2Q52LD8 501 aaPredicted RBP13.53□□□□□ -0.24
CSNK1E-208ENST00000431611 LIPMQ5VYY2 423 aa13.53□□□□□ -0.24
CSNK1E-208ENST00000431611 GTF2IRD2BQ6EKJ0 949 aa13.53□□□□□ -0.24
CSNK1E-208ENST00000431611 ZCCHC12Q6PEW1 402 aa13.53□□□□□ -0.24
CSNK1E-208ENST00000431611 GTF2IRD2Q86UP8 949 aa13.53□□□□□ -0.24
CSNK1E-208ENST00000431611 COX18Q8N8Q8 333 aa13.53□□□□□ -0.24
CSNK1E-208ENST00000431611 OR2T11Q8NH01 316 aa13.53□□□□□ -0.24
CSNK1E-208ENST00000431611 IGFBPL1Q8WX77 278 aa13.53□□□□□ -0.24
CSNK1E-208ENST00000431611 OSTF1Q92882 214 aa13.53□□□□□ -0.24
CSNK1E-208ENST00000431611 OTUB1Q96FW1 271 aaPredicted RBP13.53□□□□□ -0.24
CSNK1E-208ENST00000431611 PLPPR2Q96GM1 343 aa13.53□□□□□ -0.24
CSNK1E-208ENST00000431611 C16orf58Q96GQ5 468 aa13.53□□□□□ -0.24
CSNK1E-208ENST00000431611 ACTR6Q9GZN1 396 aa13.53□□□□□ -0.24
CSNK1E-208ENST00000431611 C12orf65Q9H3J6 166 aaKnown RBP13.53□□□□□ -0.24
CSNK1E-208ENST00000431611 CXorf56Q9H5V9 222 aa13.53□□□□□ -0.24
CSNK1E-208ENST00000431611 C12orf49Q9H741 205 aa13.53□□□□□ -0.24
CSNK1E-208ENST00000431611 FBXO34Q9NWN3 711 aa13.53□□□□□ -0.24
CSNK1E-208ENST00000431611 BAIAP2L1Q9UHR4 511 aa13.53□□□□□ -0.24
CSNK1E-208ENST00000431611 GPR52Q9Y2T5 361 aa13.53□□□□□ -0.24
CSNK1E-208ENST00000431611 FIS1Q9Y3D6 152 aa13.53□□□□□ -0.24
CSNK1E-208ENST00000431611 DNHD1Q96M86 4753 aa13.52□□□□□ -0.24
CSNK1E-208ENST00000431611 A0A1W2PQD3 144 aa13.52□□□□□ -0.25
CSNK1E-208ENST00000431611 COPEO14579 308 aa13.52□□□□□ -0.25
CSNK1E-208ENST00000431611 TMCC2O75069 709 aa13.52□□□□□ -0.25
CSNK1E-208ENST00000431611 CHEK2O96017 543 aa13.52□□□□□ -0.25
CSNK1E-208ENST00000431611 PLAUP00749 431 aa13.52□□□□□ -0.25
CSNK1E-208ENST00000431611 LINC00032P0C843 101 aa13.52□□□□□ -0.25
CSNK1E-208ENST00000431611 PABPC4LP0CB38 370 aaKnown RBP13.52□□□□□ -0.25
CSNK1E-208ENST00000431611 PAX1P15863 534 aa13.52□□□□□ -0.25
CSNK1E-208ENST00000431611 PSMB1P20618 241 aaKnown RBP13.52□□□□□ -0.25
CSNK1E-208ENST00000431611 AGTR1P30556 359 aa13.52□□□□□ -0.25
CSNK1E-208ENST00000431611 PRIM2P49643 509 aa13.52□□□□□ -0.25
CSNK1E-208ENST00000431611 CARD18P57730 90 aa13.52□□□□□ -0.25
CSNK1E-208ENST00000431611 RPL38P63173 70 aaKnown RBP13.52□□□□□ -0.25
CSNK1E-208ENST00000431611 PPP2R2BQ00005 443 aa13.52□□□□□ -0.25
CSNK1E-208ENST00000431611 CD226Q15762 336 aa13.52□□□□□ -0.25
CSNK1E-208ENST00000431611 CCNJQ5T5M9 372 aa13.52□□□□□ -0.25
CSNK1E-208ENST00000431611 TRABD2AQ86V40 505 aa13.52□□□□□ -0.25
CSNK1E-208ENST00000431611 PRIMA1Q86XR5 153 aa13.52□□□□□ -0.25
CSNK1E-208ENST00000431611 LILRA2Q8N149 483 aa13.52□□□□□ -0.25
CSNK1E-208ENST00000431611 ZNF611Q8N823 705 aa13.52□□□□□ -0.25
CSNK1E-208ENST00000431611 B4GALNT2Q8NHY0 566 aa13.52□□□□□ -0.25
CSNK1E-208ENST00000431611 POC1BQ8TC44 478 aa13.52□□□□□ -0.25
CSNK1E-208ENST00000431611 ROBO4Q8WZ75 1007 aa13.52□□□□□ -0.25
CSNK1E-208ENST00000431611 JADE3Q92613 823 aa13.52□□□□□ -0.25
CSNK1E-208ENST00000431611 MTERF3Q96E29 417 aa13.52□□□□□ -0.25
CSNK1E-208ENST00000431611 KLHL15Q96M94 604 aa13.52□□□□□ -0.25
CSNK1E-208ENST00000431611 KLHDC3Q9BQ90 382 aa13.52□□□□□ -0.25
CSNK1E-208ENST00000431611 RHOXF2Q9BQY4 288 aa13.52□□□□□ -0.25
CSNK1E-208ENST00000431611 OR10A4Q9H209 315 aa13.52□□□□□ -0.25
CSNK1E-208ENST00000431611 ZNF701Q9NV72 531 aaPredicted RBP13.52□□□□□ -0.25
CSNK1E-208ENST00000431611 TMED5Q9Y3A6 229 aa13.52□□□□□ -0.25
CSNK1E-208ENST00000431611 HS3ST1O14792 307 aa13.51□□□□□ -0.25
CSNK1E-208ENST00000431611 HSPA4LO95757 839 aa13.51□□□□□ -0.25
CSNK1E-208ENST00000431611 SHBGP04278 402 aa13.51□□□□□ -0.25
CSNK1E-208ENST00000431611 LINGO3P0C6S8 592 aa13.51□□□□□ -0.25
CSNK1E-208ENST00000431611 EFNA1P20827 205 aaPredicted RBP13.51□□□□□ -0.25
CSNK1E-208ENST00000431611 SFTPDP35247 375 aa13.51□□□□□ -0.25
CSNK1E-208ENST00000431611 EIF1P41567 113 aaKnown RBP13.51□□□□□ -0.25
CSNK1E-208ENST00000431611 ASMTP46597 345 aa13.51□□□□□ -0.25
CSNK1E-208ENST00000431611 POU6F2P78424 691 aaPredicted RBP13.51□□□□□ -0.25
CSNK1E-208ENST00000431611 EXOSC6Q5RKV6 272 aaKnown RBP13.51□□□□□ -0.25
CSNK1E-208ENST00000431611 TMEM201Q5SNT2 666 aa13.51□□□□□ -0.25
CSNK1E-208ENST00000431611 ALKBH2Q6NS38 261 aa13.51□□□□□ -0.25
CSNK1E-208ENST00000431611 RNF165Q6ZSG1 346 aa13.51□□□□□ -0.25
CSNK1E-208ENST00000431611 R3HCC1LQ7Z5L2 792 aaKnown RBP13.51□□□□□ -0.25
CSNK1E-208ENST00000431611 C10orf107Q8IVU9 208 aa13.51□□□□□ -0.25
CSNK1E-208ENST00000431611 GSPT2Q8IYD1 628 aaKnown RBP13.51□□□□□ -0.25
CSNK1E-208ENST00000431611 STEAP2Q8NFT2 490 aa13.51□□□□□ -0.25
CSNK1E-208ENST00000431611 FAM120BQ96EK7 910 aaKnown RBP13.51□□□□□ -0.25
CSNK1E-208ENST00000431611 CHMP6Q96FZ7 201 aa13.51□□□□□ -0.25
CSNK1E-208ENST00000431611 REXO5Q96IC2 774 aaKnown RBP13.51□□□□□ -0.25
CSNK1E-208ENST00000431611 TMEM204Q9BSN7 226 aa13.51□□□□□ -0.25
CSNK1E-208ENST00000431611 TRMOQ9BU70 441 aa13.51□□□□□ -0.25
CSNK1E-208ENST00000431611 GATA5Q9BWX5 397 aaPredicted RBP13.51□□□□□ -0.25
CSNK1E-208ENST00000431611 BTBD2Q9BX70 525 aa13.51□□□□□ -0.25
CSNK1E-208ENST00000431611 TUBB1Q9H4B7 451 aa13.51□□□□□ -0.25
CSNK1E-208ENST00000431611 TIGARQ9NQ88 270 aa13.51□□□□□ -0.25
CSNK1E-208ENST00000431611 ZCCHC3Q9NUD5 404 aaKnown RBP13.51□□□□□ -0.25
CSNK1E-208ENST00000431611 MID2Q9UJV3 735 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms