RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 PRSS57Q6UWY2 283 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 ANGPTL8Q6UXH0 198 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 MSANTD1Q6ZTZ1 278 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 IKBIPQ70UQ0 350 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 COMMD6Q7Z4G1 85 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 IQCHQ86VS3 1027 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 SPATA24Q86W54 205 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 IFNEQ86WN2 208 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 DHFR2Q86XF0 187 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 METTL4Q8N3J2 472 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 MINDY1Q8N5J2 469 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 KRTCAP2Q8N6L1 136 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 LINC01555Q8NAE3 123 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 ZNF740Q8NDX6 193 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 VPS37AQ8NEZ2 397 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 TNIP2Q8NFZ5 429 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 OR2A1Q8NGT9 310 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 NCLNQ969V3 563 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 RERGQ96A58 199 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 CLDN23Q96B33 292 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 TESCQ96BS2 214 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 PPCDCQ96CD2 204 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 ASB9Q96DX5 294 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 FCRL1Q96LA6 429 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 TEX37Q96LM6 180 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 PPM1MQ96MI6 270 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 PRAP1Q96NZ9 151 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 GBP5Q96PP8 586 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 PANX1Q96RD7 426 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 SH3GL1Q99961 368 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 CCDC3Q9BQI4 270 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 DPH7Q9BTV6 452 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 LRRC61Q9BV99 259 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 NLNQ9BYT8 704 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 VCX3BQ9H321 246 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 TCEAL2Q9H3H9 227 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 MUC13Q9H3R2 512 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 CLMPQ9H6B4 373 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 NT5DC2Q9H857 520 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 RNPEPL1Q9HAU8 725 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 TM9SF3Q9HD45 589 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 MYNNQ9NPC7 610 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 ATAD3AQ9NVI7 634 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 IRAK4Q9NWZ3 460 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 FAM120CQ9NX05 1096 aaKnown RBP3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 ZNF624Q9P2J8 865 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 ANKMY1Q9P2S6 941 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 PRDM4Q9UKN5 801 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 PCDHGB4Q9UN71 923 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 SNX7Q9UNH6 387 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 DHDHQ9UQ10 334 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 POMPQ9Y244 141 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 AP3M1Q9Y2T2 418 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 TRANK1O15050 2925 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 PDE4DIPQ5VU43 2346 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 ADAMTS9Q9P2N4 1935 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 A0A096LPI6 279 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 A0A0G2JN53 185 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 A0A0J9YVX5 310 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 A0A0J9YY10 115 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 A0A1W2PR77 199 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 PLSCR5A0PG75 271 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 A6NCN8 305 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 OR6C74A6NCV1 312 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 ASPDHA6ND91 283 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 OR5K3A6NET4 321 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 URADA6NGE7 173 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 EVPLLA8MZ36 301 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 FAM220BPB1ANY3 271 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 KDM4EB2RXH2 506 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 FXYD1O00168 92 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 NME4O00746 187 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 PLPP1O14494 284 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 ANKRD28O15084 1053 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 VILLO15195 856 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 ERI3O43414 337 aaKnown RBP3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 SH3BP5O60239 455 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 DFNA5O60443 496 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 SDC3O75056 442 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 GUCY1B2O75343 617 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 BCAS2O75934 225 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 SORBS2O94875 1100 aaKnown RBP3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 ZBTB11O95625 1053 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 DDAH2O95865 285 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 STATHP02808 62 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 GBAP04062 536 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 CSF2P04141 144 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 KLK1P06870 262 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 ABCB1P08183 1280 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 IL3P08700 152 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 ALPPL2P10696 532 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 HSD17B1P14061 328 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 ANPEPP15144 967 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 CD1EP15812 388 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 MAGP20916 626 aa3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 ZNF10P21506 573 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 PPIBP23284 216 aaKnown RBP3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 PSMA4P25789 261 aaKnown RBP3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 PEBP1P30086 187 aaKnown RBP3.53□□□□□ -1.84
HMGB3P20-201ENST00000417997 NTSP30990 170 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms