RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 APMAPQ9HDC9 416 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 MEPEQ9NQ76 525 aaPredicted RBP11.35□□□□□ -0.59
UBR4-205ENST00000417040 CLDND1Q9NY35 253 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 TMEM14AQ9Y6G1 99 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 RPS10-NUDT3A0A1W2PQS6 291 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 E9PI62 339 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 CPNE6O95741 557 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 PFKMP08237 780 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 FGF4P08620 206 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 DRD2P14416 443 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 RPS10P46783 165 aaKnown RBP11.35□□□□□ -0.59
UBR4-205ENST00000417040 CCNJQ5T5M9 372 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 SENP5Q96HI0 755 aaPredicted RBP11.35□□□□□ -0.59
UBR4-205ENST00000417040 NECTIN4Q96NY8 510 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 OR14A2Q96R54 314 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 OCEL1Q9H607 264 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 MTHFD2LQ9H903 347 aaPredicted RBP11.35□□□□□ -0.59
UBR4-205ENST00000417040 LCMT2O60294 686 aaKnown RBP11.35□□□□□ -0.59
UBR4-205ENST00000417040 RNGTTO60942 597 aaKnown RBP11.35□□□□□ -0.59
UBR4-205ENST00000417040 TXNDC12O95881 172 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 PTHP01270 115 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 ALPLP05186 524 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 RHOP08100 348 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 HNF4GQ14541 408 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 ZNF546Q86UE3 836 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 OR2T11Q8NH01 316 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 SEC22AQ96IW7 307 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 C16orf70Q9BSU1 422 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 NPIPB15A6NHN6 443 aaPredicted RBP11.35□□□□□ -0.59
UBR4-205ENST00000417040 NXPH3O95157 252 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 SERPINA7P05543 415 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 CSF1P09603 554 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 GPR50Q13585 617 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 CTSL3PQ5NE16 218 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 EEF1A1P5Q5VTE0 462 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 TBPL2Q6SJ96 375 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 TMEM102Q8N9M5 508 aaPredicted RBP11.35□□□□□ -0.59
UBR4-205ENST00000417040 SLAIN1Q8ND83 568 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 BRIX1Q8TDN6 353 aaKnown RBP11.35□□□□□ -0.59
UBR4-205ENST00000417040 OR2M4Q96R27 311 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 KCNJ16Q9NPI9 418 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 SERTAD4Q9NUC0 356 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 TXNL4BQ9NX01 149 aaKnown RBP11.35□□□□□ -0.59
UBR4-205ENST00000417040 A6NLC8 198 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 FZD7O75084 574 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 ADH1BP00325 375 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 IFNA4P05014 189 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 SRP9P49458 86 aaKnown RBP11.35□□□□□ -0.59
UBR4-205ENST00000417040 SPOCK1Q08629 439 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 FCRLAQ7L513 359 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 PIANPQ8IYJ0 282 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 OR56B2PQ8NGI1 322 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 TMEM234Q8WY98 164 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 DMRT3Q9NQL9 472 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 ASB4Q9Y574 426 aa11.35□□□□□ -0.59
UBR4-205ENST00000417040 FAM163BP0C2L3 166 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 RPS15AP62244 130 aaKnown RBP11.34□□□□□ -0.59
UBR4-205ENST00000417040 ENTPD8Q5MY95 495 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 FAM69AQ5T7M9 428 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 VASNQ6EMK4 673 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 ZNF619Q8N2I2 560 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 SLC12A9Q9BXP2 914 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 RNF167Q9H6Y7 350 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 H3BML4 177 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 CCR6P51684 374 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 GALNT1Q10472 559 aaPredicted RBP11.34□□□□□ -0.59
UBR4-205ENST00000417040 OR2T4Q8NH00 348 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 ABHD5Q8WTS1 349 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 FANCFQ9NPI8 374 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 PLEKHJ1Q9NW61 149 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 hCG_1807616A0A1W2PRN6 198 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 F5H5K5 113 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 K7EPK0 472 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 SHOXO15266 292 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 EDN1P05305 212 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 CD6P30203 668 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 RAB41Q5JT25 222 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 UBE2NLQ5JXB2 153 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 RANBP10Q6VN20 620 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 FAM71E2Q8N5Q1 922 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 SLC35B4Q969S0 331 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 MAF1Q9H063 256 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 FAM230AA0A1W2PPH8 454 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 ZNF840PA6NDX5 716 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 RNASET2O00584 256 aaKnown RBP11.34□□□□□ -0.59
UBR4-205ENST00000417040 NUDT21O43809 227 aaKnown RBP11.34□□□□□ -0.59
UBR4-205ENST00000417040 SCGB1D1O95968 90 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 ECH1Q13011 328 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 PDSS1Q5T2R2 415 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 C12orf76Q8N812 135 aaPredicted RBP11.34□□□□□ -0.59
UBR4-205ENST00000417040 OR1S1Q8NH92 325 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 TMEM163Q8TC26 289 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 NUDT8Q8WV74 236 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 TMEM239Q8WW34 195 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 MR1Q95460 341 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 ZNF681Q96N22 645 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 SNAPINO95295 136 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 HLA-AP01891 365 aaKnown RBP11.34□□□□□ -0.59
UBR4-205ENST00000417040 SERPINA5P05154 406 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 PGCP20142 388 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms