RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 GPR75O95800 540 aa14.11□□□□□ -0.15
SCAMP4-202ENST00000409472 CCR5P51681 352 aa14.11□□□□□ -0.15
SCAMP4-202ENST00000409472 ST3GAL3Q11203 375 aa14.11□□□□□ -0.15
SCAMP4-202ENST00000409472 TSPAN31Q12999 210 aa14.11□□□□□ -0.15
SCAMP4-202ENST00000409472 NDUFA9Q16795 377 aa14.11□□□□□ -0.15
SCAMP4-202ENST00000409472 MRPL2Q5T653 305 aaKnown RBP14.11□□□□□ -0.15
SCAMP4-202ENST00000409472 OOSP2Q86WS3 158 aa14.11□□□□□ -0.15
SCAMP4-202ENST00000409472 TEX47Q8TBZ9 253 aa14.11□□□□□ -0.15
SCAMP4-202ENST00000409472 TMEM246Q9BRR3 403 aa14.11□□□□□ -0.15
SCAMP4-202ENST00000409472 SLC7A5P2Q9GIP4 190 aa14.11□□□□□ -0.15
SCAMP4-202ENST00000409472 PIGUQ9H490 435 aa14.11□□□□□ -0.15
SCAMP4-202ENST00000409472 RPL36Q9Y3U8 105 aaKnown RBP14.11□□□□□ -0.15
SCAMP4-202ENST00000409472 VPS13AQ96RL7 3174 aa14.11□□□□□ -0.15
SCAMP4-202ENST00000409472 THADAQ6YHU6 1953 aa14.11□□□□□ -0.15
SCAMP4-202ENST00000409472 TRIOBPQ9H2D6 2365 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 A0A0A6YYC8 382 aaPredicted RBP14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 A0A1W2PPC4 97 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 SLC9B1P1A6NJY1 282 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 I3L1I5 382 aaPredicted RBP14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 AP3D1O14617 1153 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 POLR1CO15160 346 aaPredicted RBP14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 CTRB1P17538 263 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 TGM4P49221 684 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 CTAG1AP78358 180 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 MAT1AQ00266 395 aaKnown RBP14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 SPHARQ15513 63 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 SNAP47Q5SQN1 464 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 OR2G6Q5TZ20 316 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 CTRB2Q6GPI1 263 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 PARGQ86W56 976 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 COX18Q8N8Q8 333 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 GPR151Q8TDV0 419 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 AIFM2Q9BRQ8 373 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 MTHFD2LQ9H903 347 aaPredicted RBP14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 KLHL28Q9NXS3 571 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 TESQ9UGI8 421 aaKnown RBP14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 CA14Q9ULX7 337 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 CLCA2Q9UQC9 943 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 YARS2Q9Y2Z4 477 aaKnown RBP14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 SNTNA6NMZ2 147 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 KLF4O43474 513 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 CBX7O95931 251 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 SCG5P05408 212 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 ZNF10P21506 573 aaPredicted RBP14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 SMSP52788 366 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 ERV3-1Q14264 604 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 ATAD3CQ5T2N8 411 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 LIPKQ5VXJ0 399 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 MEDAGQ5VYS4 303 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 DESI1Q6ICB0 168 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 SLC27A4Q6P1M0 643 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 METTL27Q8N6F8 245 aaPredicted RBP14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 NANOGP1Q8N7R0 232 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 BBS1Q8NFJ9 593 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 OR4N2Q8NGD1 307 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 PFN4Q8NHR9 129 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 PIGXQ8TBF5 258 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 GNPDA2Q8TDQ7 276 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 ACOT11Q8WXI4 607 aaPredicted RBP14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 PRSS27Q9BQR3 290 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 C20orf141Q9NUB4 165 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 DTX4Q9Y2E6 619 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 ABCA7Q8IZY2 2146 aa14.1□□□□□ -0.15
SCAMP4-202ENST00000409472 ADAM11O75078 769 aa14.09□□□□□ -0.15
SCAMP4-202ENST00000409472 RPS4Y1P22090 263 aaKnown RBP14.09□□□□□ -0.15
SCAMP4-202ENST00000409472 RHAGQ02094 409 aa14.09□□□□□ -0.15
SCAMP4-202ENST00000409472 SAMD14Q8IZD0 417 aaPredicted RBP14.09□□□□□ -0.15
SCAMP4-202ENST00000409472 LINC00471Q8N535 108 aa14.09□□□□□ -0.15
SCAMP4-202ENST00000409472 C19orf47Q8N9M1 422 aaKnown RBP14.09□□□□□ -0.15
SCAMP4-202ENST00000409472 OR6F1Q8NGZ6 308 aa14.09□□□□□ -0.15
SCAMP4-202ENST00000409472 TMEM163Q8TC26 289 aa14.09□□□□□ -0.15
SCAMP4-202ENST00000409472 ZFPM2Q8WW38 1151 aa14.09□□□□□ -0.15
SCAMP4-202ENST00000409472 EXOSC4Q9NPD3 245 aaKnown RBP14.09□□□□□ -0.15
SCAMP4-202ENST00000409472 IGHV1OR15-9A0A0B4J2B8 117 aa14.09□□□□□ -0.15
SCAMP4-202ENST00000409472 FAM221BA6H8Z2 402 aa14.09□□□□□ -0.15
SCAMP4-202ENST00000409472 MBTPS2O43462 519 aa14.09□□□□□ -0.15
SCAMP4-202ENST00000409472 CHST10O43529 356 aa14.09□□□□□ -0.15
SCAMP4-202ENST00000409472 PLOD3O60568 738 aa14.09□□□□□ -0.15
SCAMP4-202ENST00000409472 GSTM3P21266 225 aa14.09□□□□□ -0.15
SCAMP4-202ENST00000409472 GABRA3P34903 492 aa14.09□□□□□ -0.15
SCAMP4-202ENST00000409472 FXYD6P3P58550 94 aa14.09□□□□□ -0.15
SCAMP4-202ENST00000409472 RASSF6Q6ZTQ3 369 aa14.09□□□□□ -0.15
SCAMP4-202ENST00000409472 ZNF619Q8N2I2 560 aa14.09□□□□□ -0.15
SCAMP4-202ENST00000409472 FAM109AQ8N4B1 249 aa14.09□□□□□ -0.15
SCAMP4-202ENST00000409472 KBTBD8Q8NFY9 601 aa14.09□□□□□ -0.15
SCAMP4-202ENST00000409472 OR52R1Q8NGF1 315 aa14.09□□□□□ -0.15
SCAMP4-202ENST00000409472 RNFT2Q96EX2 444 aa14.09□□□□□ -0.15
SCAMP4-202ENST00000409472 KLHDC7BQ96G42 594 aa14.09□□□□□ -0.15
SCAMP4-202ENST00000409472 MAP3K3Q99759 626 aa14.09□□□□□ -0.15
SCAMP4-202ENST00000409472 POLR2J2Q9GZM3 115 aaKnown RBP14.09□□□□□ -0.15
SCAMP4-202ENST00000409472 ENKD1Q9H0I2 346 aa14.09□□□□□ -0.15
SCAMP4-202ENST00000409472 SEMA6CQ9H3T2 930 aa14.09□□□□□ -0.15
SCAMP4-202ENST00000409472 ATP13A2Q9NQ11 1180 aa14.09□□□□□ -0.15
SCAMP4-202ENST00000409472 C12orf4Q9NQ89 552 aa14.09□□□□□ -0.15
SCAMP4-202ENST00000409472 CFAP54Q96N23 3096 aa14.09□□□□□ -0.15
SCAMP4-202ENST00000409472 APOA1P02647 267 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 FPR3P25089 353 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 RGS19P49795 217 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 DEFA1P59665 94 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 DEFA3P59666 94 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms