RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 SAMD8Q96LT4 415 aa16.79■□□□□ 0.28
CD40-201ENST00000372276 PRSS27Q9BQR3 290 aa16.79■□□□□ 0.28
CD40-201ENST00000372276 TRIM2Q9C040 744 aa16.79■□□□□ 0.28
CD40-201ENST00000372276 SRRQ9GZT4 340 aa16.79■□□□□ 0.28
CD40-201ENST00000372276 KCNN2Q9H2S1 579 aa16.79■□□□□ 0.28
CD40-201ENST00000372276 OR52D1Q9H346 318 aa16.79■□□□□ 0.28
CD40-201ENST00000372276 SEMA6CQ9H3T2 930 aa16.79■□□□□ 0.28
CD40-201ENST00000372276 ZNF576Q9H609 170 aa16.79■□□□□ 0.28
CD40-201ENST00000372276 USP36Q9P275 1121 aaKnown RBP16.79■□□□□ 0.28
CD40-201ENST00000372276 PLEKHB1Q9UF11 243 aaPredicted RBP16.79■□□□□ 0.28
CD40-201ENST00000372276 MRPS33Q9Y291 106 aaKnown RBP16.79■□□□□ 0.28
CD40-201ENST00000372276 CA5BQ9Y2D0 317 aa16.79■□□□□ 0.28
CD40-201ENST00000372276 CARD8Q9Y2G2 431 aa16.79■□□□□ 0.28
CD40-201ENST00000372276 TCRBV21S2A2A0A5A6 115 aa16.78■□□□□ 0.28
CD40-201ENST00000372276 HTR3EA5X5Y0 456 aa16.78■□□□□ 0.28
CD40-201ENST00000372276 SLC22A31A6NKX4 558 aa16.78■□□□□ 0.28
CD40-201ENST00000372276 PLD2O14939 933 aa16.78■□□□□ 0.28
CD40-201ENST00000372276 FGF17O60258 216 aa16.78■□□□□ 0.28
CD40-201ENST00000372276 KCNK2O95069 426 aa16.78■□□□□ 0.28
CD40-201ENST00000372276 RPS25P62851 125 aaKnown RBP16.78■□□□□ 0.28
CD40-201ENST00000372276 HNRNPA0Q13151 305 aaKnown RBP16.78■□□□□ 0.28
CD40-201ENST00000372276 BIKQ13323 160 aa16.78■□□□□ 0.28
CD40-201ENST00000372276 GLYR1Q49A26 553 aaPredicted RBP16.78■□□□□ 0.28
CD40-201ENST00000372276 GARNL3Q5VVW2 1013 aa16.78■□□□□ 0.28
CD40-201ENST00000372276 KIAA0895LQ68EN5 471 aa16.78■□□□□ 0.28
CD40-201ENST00000372276 ZNF544Q6NX49 715 aa16.78■□□□□ 0.28
CD40-201ENST00000372276 GALNT12Q8IXK2 581 aa16.78■□□□□ 0.28
CD40-201ENST00000372276 OIT3Q8WWZ8 545 aa16.78■□□□□ 0.28
CD40-201ENST00000372276 ACOT12Q8WYK0 555 aa16.78■□□□□ 0.28
CD40-201ENST00000372276 TRMT61AQ96FX7 289 aaKnown RBP16.78■□□□□ 0.28
CD40-201ENST00000372276 ZNF578Q96N58 590 aaPredicted RBP16.78■□□□□ 0.28
CD40-201ENST00000372276 LMF2Q9BU23 707 aaKnown RBP16.78■□□□□ 0.28
CD40-201ENST00000372276 TTYH1Q9H313 450 aaPredicted RBP16.78■□□□□ 0.28
CD40-201ENST00000372276 SCN3AQ9NY46 2000 aa16.78■□□□□ 0.28
CD40-201ENST00000372276 LRP4O75096 1905 aa16.78■□□□□ 0.28
CD40-201ENST00000372276 OR5K3A6NET4 321 aa16.78■□□□□ 0.28
CD40-201ENST00000372276 FABP12A6NFH5 140 aa16.78■□□□□ 0.28
CD40-201ENST00000372276 TMEM221A6NGB7 291 aa16.78■□□□□ 0.28
CD40-201ENST00000372276 SRPX2O60687 465 aaPredicted RBP16.78■□□□□ 0.28
CD40-201ENST00000372276 MSL3P1P0C860 447 aa16.78■□□□□ 0.28
CD40-201ENST00000372276 TAS2R43P59537 309 aa16.78■□□□□ 0.28
CD40-201ENST00000372276 MGAT2Q10469 447 aa16.78■□□□□ 0.28
CD40-201ENST00000372276 ASAH1Q13510 395 aa16.78■□□□□ 0.28
CD40-201ENST00000372276 PDZK1Q5T2W1 519 aa16.78■□□□□ 0.28
CD40-201ENST00000372276 FAM131AQ6UXB0 335 aa16.78■□□□□ 0.28
CD40-201ENST00000372276 GPALPP1Q8IXQ4 340 aa16.78■□□□□ 0.28
CD40-201ENST00000372276 CMIPQ8IY22 773 aa16.78■□□□□ 0.28
CD40-201ENST00000372276 RPLP0P6Q8NHW5 317 aa16.78■□□□□ 0.28
CD40-201ENST00000372276 SECISBP2Q96T21 854 aaKnown RBP16.78■□□□□ 0.28
CD40-201ENST00000372276 KATNB1Q9BVA0 655 aa16.78■□□□□ 0.28
CD40-201ENST00000372276 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.78■□□□□ 0.28
CD40-201ENST00000372276 FANCMQ8IYD8 2048 aa16.77■□□□□ 0.28
CD40-201ENST00000372276 A0A1W2PQL4 384 aaPredicted RBP16.77■□□□□ 0.27
CD40-201ENST00000372276 J3QRE1 110 aa16.77■□□□□ 0.27
CD40-201ENST00000372276 CASKO14936 926 aa16.77■□□□□ 0.27
CD40-201ENST00000372276 CHP2O43745 196 aa16.77■□□□□ 0.27
CD40-201ENST00000372276 TRAPPC2P0DI81 140 aa16.77■□□□□ 0.27
CD40-201ENST00000372276 TRAPPC2BP0DI82 140 aa16.77■□□□□ 0.27
CD40-201ENST00000372276 IFI30P13284 250 aa16.77■□□□□ 0.27
CD40-201ENST00000372276 GABRG2P18507 467 aa16.77■□□□□ 0.27
CD40-201ENST00000372276 GABRA3P34903 492 aa16.77■□□□□ 0.27
CD40-201ENST00000372276 RPS5P46782 204 aaKnown RBP16.77■□□□□ 0.27
CD40-201ENST00000372276 SHC2P98077 582 aa16.77■□□□□ 0.27
CD40-201ENST00000372276 HOXC5Q00444 222 aa16.77■□□□□ 0.27
CD40-201ENST00000372276 POU4F2Q12837 409 aa16.77■□□□□ 0.27
CD40-201ENST00000372276 AGAP6Q5VW22 663 aa16.77■□□□□ 0.27
CD40-201ENST00000372276 SMARCD3Q6STE5 483 aa16.77■□□□□ 0.27
CD40-201ENST00000372276 ZNF322Q6U7Q0 402 aaPredicted RBP16.77■□□□□ 0.27
CD40-201ENST00000372276 TMEM92Q6UXU6 159 aa16.77■□□□□ 0.27
CD40-201ENST00000372276 ZNF550Q7Z398 422 aa16.77■□□□□ 0.27
CD40-201ENST00000372276 CPOQ8IVL8 374 aa16.77■□□□□ 0.27
CD40-201ENST00000372276 VWA5B2Q8N398 1253 aa16.77■□□□□ 0.27
CD40-201ENST00000372276 DNAJA4Q8WW22 397 aaPredicted RBP16.77■□□□□ 0.27
CD40-201ENST00000372276 DIRAS2Q96HU8 199 aa16.77■□□□□ 0.27
CD40-201ENST00000372276 AGAP4Q96P64 663 aa16.77■□□□□ 0.27
CD40-201ENST00000372276 SLC22A4Q9H015 551 aa16.77■□□□□ 0.27
CD40-201ENST00000372276 TPK1Q9H3S4 243 aa16.77■□□□□ 0.27
CD40-201ENST00000372276 ABCB9Q9NP78 766 aa16.77■□□□□ 0.27
CD40-201ENST00000372276 CMC2Q9NRP2 79 aa16.77■□□□□ 0.27
CD40-201ENST00000372276 SPTY2D1-AS1A0A0U1RR47 76 aa16.76■□□□□ 0.27
CD40-201ENST00000372276 RFXAPO00287 272 aa16.76■□□□□ 0.27
CD40-201ENST00000372276 BHLHE40O14503 412 aa16.76■□□□□ 0.27
CD40-201ENST00000372276 PIP5K1CO60331 668 aa16.76■□□□□ 0.27
CD40-201ENST00000372276 OR10H2O60403 315 aa16.76■□□□□ 0.27
CD40-201ENST00000372276 LYPD3O95274 346 aa16.76■□□□□ 0.27
CD40-201ENST00000372276 IL7P13232 177 aa16.76■□□□□ 0.27
CD40-201ENST00000372276 CTSEP14091 401 aa16.76■□□□□ 0.27
CD40-201ENST00000372276 F8A1P23610 371 aa16.76■□□□□ 0.27
CD40-201ENST00000372276 SOX18P35713 384 aa16.76■□□□□ 0.27
CD40-201ENST00000372276 TPTEP56180 551 aa16.76■□□□□ 0.27
CD40-201ENST00000372276 FLYWCH1Q4VC44 716 aa16.76■□□□□ 0.27
CD40-201ENST00000372276 TAF8Q7Z7C8 310 aa16.76■□□□□ 0.27
CD40-201ENST00000372276 LHFPL3Q86UP9 236 aa16.76■□□□□ 0.27
CD40-201ENST00000372276 RAB43Q86YS6 212 aa16.76■□□□□ 0.27
CD40-201ENST00000372276 LAX1Q8IWV1 398 aa16.76■□□□□ 0.27
CD40-201ENST00000372276 ARIH2OSQ8N7S6 290 aa16.76■□□□□ 0.27
CD40-201ENST00000372276 IL17RDQ8NFM7 739 aa16.76■□□□□ 0.27
CD40-201ENST00000372276 OR13H1Q8NG92 308 aa16.76■□□□□ 0.27
CD40-201ENST00000372276 TMEM203Q969S6 136 aa16.76■□□□□ 0.27
CD40-201ENST00000372276 ANKRD9Q96BM1 317 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 180.4 ms