RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 HHATLQ9HCP6 504 aa13.43□□□□□ -0.26
GDPD3-201ENST00000360688 TNFRSF12AQ9NP84 129 aa13.43□□□□□ -0.26
GDPD3-201ENST00000360688 RRAGDQ9NQL2 400 aaPredicted RBP13.43□□□□□ -0.26
GDPD3-201ENST00000360688 MED17Q9NVC6 651 aa13.43□□□□□ -0.26
GDPD3-201ENST00000360688 EMCNQ9ULC0 261 aa13.43□□□□□ -0.26
GDPD3-201ENST00000360688 CCL27Q9Y4X3 112 aa13.43□□□□□ -0.26
GDPD3-201ENST00000360688 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.42□□□□□ -0.26
GDPD3-201ENST00000360688 PDPK1O15530 556 aa13.42□□□□□ -0.26
GDPD3-201ENST00000360688 TUBBP07437 444 aa13.42□□□□□ -0.26
GDPD3-201ENST00000360688 ACP2P11117 423 aa13.42□□□□□ -0.26
GDPD3-201ENST00000360688 PYGBP11216 843 aa13.42□□□□□ -0.26
GDPD3-201ENST00000360688 AGTR1P30556 359 aa13.42□□□□□ -0.26
GDPD3-201ENST00000360688 GPC1P35052 558 aa13.42□□□□□ -0.26
GDPD3-201ENST00000360688 ZNF41P51814 821 aaPredicted RBP13.42□□□□□ -0.26
GDPD3-201ENST00000360688 PRKAG1P54619 331 aa13.42□□□□□ -0.26
GDPD3-201ENST00000360688 ZNF844Q08AG5 666 aa13.42□□□□□ -0.26
GDPD3-201ENST00000360688 VPS26BQ4G0F5 336 aa13.42□□□□□ -0.26
GDPD3-201ENST00000360688 ZNF385BQ569K4 471 aa13.42□□□□□ -0.26
GDPD3-201ENST00000360688 HBMQ6B0K9 141 aa13.42□□□□□ -0.26
GDPD3-201ENST00000360688 ANKRD26P1Q6NSI1 321 aa13.42□□□□□ -0.26
GDPD3-201ENST00000360688 FRMD7Q6ZUT3 714 aa13.42□□□□□ -0.26
GDPD3-201ENST00000360688 CEP70Q8NHQ1 597 aa13.42□□□□□ -0.26
GDPD3-201ENST00000360688 SPATA3Q8NHX4 192 aa13.42□□□□□ -0.26
GDPD3-201ENST00000360688 RAB3IL1Q8TBN0 382 aa13.42□□□□□ -0.26
GDPD3-201ENST00000360688 POC1BQ8TC44 478 aa13.42□□□□□ -0.26
GDPD3-201ENST00000360688 FAM110BQ8TC76 370 aa13.42□□□□□ -0.26
GDPD3-201ENST00000360688 ACTRT2Q8TDY3 377 aa13.42□□□□□ -0.26
GDPD3-201ENST00000360688 OSTF1Q92882 214 aa13.42□□□□□ -0.26
GDPD3-201ENST00000360688 CIDECQ96AQ7 238 aaPredicted RBP13.42□□□□□ -0.26
GDPD3-201ENST00000360688 CCDC126Q96EE4 140 aa13.42□□□□□ -0.26
GDPD3-201ENST00000360688 GIMAP5Q96F15 307 aa13.42□□□□□ -0.26
GDPD3-201ENST00000360688 SH3YL1Q96HL8 342 aaPredicted RBP13.42□□□□□ -0.26
GDPD3-201ENST00000360688 RNF145Q96MT1 663 aa13.42□□□□□ -0.26
GDPD3-201ENST00000360688 TMEM185BQ9H7F4 350 aa13.42□□□□□ -0.26
GDPD3-201ENST00000360688 NTMQ9P121 344 aa13.42□□□□□ -0.26
GDPD3-201ENST00000360688 LAMP3Q9UQV4 416 aa13.42□□□□□ -0.26
GDPD3-201ENST00000360688 NUP214P35658 2090 aaPredicted RBP13.42□□□□□ -0.26
GDPD3-201ENST00000360688 H3BQF6 201 aa13.41□□□□□ -0.26
GDPD3-201ENST00000360688 SEC22BO75396 215 aa13.41□□□□□ -0.26
GDPD3-201ENST00000360688 CRLF1O75462 422 aa13.41□□□□□ -0.26
GDPD3-201ENST00000360688 KCNK2O95069 426 aa13.41□□□□□ -0.26
GDPD3-201ENST00000360688 MYL2P10916 166 aa13.41□□□□□ -0.26
GDPD3-201ENST00000360688 ME2P23368 584 aa13.41□□□□□ -0.26
GDPD3-201ENST00000360688 NAA20P61599 178 aa13.41□□□□□ -0.26
GDPD3-201ENST00000360688 RPS4XP62701 263 aaKnown RBP13.41□□□□□ -0.26
GDPD3-201ENST00000360688 GTF2IRD2BQ6EKJ0 949 aa13.41□□□□□ -0.26
GDPD3-201ENST00000360688 ADAM5Q6NVV9 412 aa13.41□□□□□ -0.26
GDPD3-201ENST00000360688 EMBQ6PCB8 327 aa13.41□□□□□ -0.26
GDPD3-201ENST00000360688 FIGNL1Q6PIW4 674 aa13.41□□□□□ -0.26
GDPD3-201ENST00000360688 ZYG11AQ6WRX3 759 aa13.41□□□□□ -0.26
GDPD3-201ENST00000360688 GTF2IRD2Q86UP8 949 aa13.41□□□□□ -0.26
GDPD3-201ENST00000360688 SLC16A11Q8NCK7 471 aa13.41□□□□□ -0.26
GDPD3-201ENST00000360688 NUP43Q8NFH3 380 aa13.41□□□□□ -0.26
GDPD3-201ENST00000360688 STEAP2Q8NFT2 490 aa13.41□□□□□ -0.26
GDPD3-201ENST00000360688 LILRB1Q8NHL6 650 aaPredicted RBP13.41□□□□□ -0.26
GDPD3-201ENST00000360688 FBXO30Q8TB52 745 aa13.41□□□□□ -0.26
GDPD3-201ENST00000360688 ROBO4Q8WZ75 1007 aa13.41□□□□□ -0.26
GDPD3-201ENST00000360688 ZNF764Q96H86 408 aaPredicted RBP13.41□□□□□ -0.26
GDPD3-201ENST00000360688 METTL2AQ96IZ6 378 aaKnown RBP13.41□□□□□ -0.26
GDPD3-201ENST00000360688 FBXO34Q9NWN3 711 aa13.41□□□□□ -0.26
GDPD3-201ENST00000360688 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.41□□□□□ -0.26
GDPD3-201ENST00000360688 TBK1Q9UHD2 729 aa13.41□□□□□ -0.26
GDPD3-201ENST00000360688 DCDC2Q9UHG0 476 aa13.41□□□□□ -0.26
GDPD3-201ENST00000360688 V9GYY5 206 aaPredicted RBP13.41□□□□□ -0.26
GDPD3-201ENST00000360688 NPIPB8E9PQR5 432 aa13.4□□□□□ -0.26
GDPD3-201ENST00000360688 OVOL3O00110 214 aa13.4□□□□□ -0.26
GDPD3-201ENST00000360688 TBX19O60806 448 aa13.4□□□□□ -0.26
GDPD3-201ENST00000360688 CRCPO75575 148 aa13.4□□□□□ -0.26
GDPD3-201ENST00000360688 GCM2O75603 506 aaPredicted RBP13.4□□□□□ -0.26
GDPD3-201ENST00000360688 PRPH2P23942 346 aa13.4□□□□□ -0.26
GDPD3-201ENST00000360688 SHC1P29353 583 aa13.4□□□□□ -0.26
GDPD3-201ENST00000360688 FRKP42685 505 aaPredicted RBP13.4□□□□□ -0.26
GDPD3-201ENST00000360688 CARD18P57730 90 aa13.4□□□□□ -0.26
GDPD3-201ENST00000360688 DUSP5Q16690 384 aa13.4□□□□□ -0.26
GDPD3-201ENST00000360688 CLEC12BQ2HXU8 276 aa13.4□□□□□ -0.26
GDPD3-201ENST00000360688 PDSS1Q5T2R2 415 aa13.4□□□□□ -0.26
GDPD3-201ENST00000360688 ALKBH2Q6NS38 261 aa13.4□□□□□ -0.26
GDPD3-201ENST00000360688 SZRD1Q7Z422 152 aa13.4□□□□□ -0.26
GDPD3-201ENST00000360688 TRABD2AQ86V40 505 aa13.4□□□□□ -0.26
GDPD3-201ENST00000360688 TDRPQ86YL5 185 aa13.4□□□□□ -0.26
GDPD3-201ENST00000360688 GABRG1Q8N1C3 465 aa13.4□□□□□ -0.26
GDPD3-201ENST00000360688 OR6Y1Q8NGX8 325 aa13.4□□□□□ -0.26
GDPD3-201ENST00000360688 ZFP28Q8NHY6 868 aa13.4□□□□□ -0.26
GDPD3-201ENST00000360688 RNF128Q8TEB7 428 aa13.4□□□□□ -0.26
GDPD3-201ENST00000360688 AENQ8WTP8 325 aaKnown RBP13.4□□□□□ -0.26
GDPD3-201ENST00000360688 S100PBPQ96BU1 408 aa13.4□□□□□ -0.26
GDPD3-201ENST00000360688 KLHL15Q96M94 604 aa13.4□□□□□ -0.26
GDPD3-201ENST00000360688 MS4A4EQ96PG1 132 aa13.4□□□□□ -0.26
GDPD3-201ENST00000360688 IQCGQ9H095 443 aaKnown RBP13.4□□□□□ -0.26
GDPD3-201ENST00000360688 UBQLN4Q9NRR5 601 aa13.4□□□□□ -0.26
GDPD3-201ENST00000360688 C1orf109Q9NX04 203 aa13.4□□□□□ -0.26
GDPD3-201ENST00000360688 RNF115Q9Y4L5 304 aa13.4□□□□□ -0.26
GDPD3-201ENST00000360688 PTGDR2Q9Y5Y4 395 aa13.4□□□□□ -0.26
GDPD3-201ENST00000360688 A0A1W2PPM1 405 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 A0A1W2PQD3 144 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 RNF223E7ERA6 249 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 NTN1O95631 604 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 PROCP04070 461 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 LINGO3P0C6S8 592 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 DANCRP0C864 163 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms