RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 HDDC3Q8N4P3 179 aa8.1□□□□□ -1.11
CLK1-201ENST00000321356 OR4M1Q8NGD0 313 aa8.1□□□□□ -1.11
CLK1-201ENST00000321356 AKAP1Q92667 903 aaKnown RBP eCLIP8.1□□□□□ -1.11
CLK1-201ENST00000321356 ASB16Q96NS5 453 aa8.1□□□□□ -1.11
CLK1-201ENST00000321356 FCRL4Q96PJ5 515 aa8.1□□□□□ -1.11
CLK1-201ENST00000321356 WACQ9BTA9 647 aa8.1□□□□□ -1.11
CLK1-201ENST00000321356 ALG8Q9BVK2 526 aa8.1□□□□□ -1.11
CLK1-201ENST00000321356 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.1□□□□□ -1.11
CLK1-201ENST00000321356 OR52D1Q9H346 318 aa8.1□□□□□ -1.11
CLK1-201ENST00000321356 SLC28A3Q9HAS3 691 aa8.1□□□□□ -1.11
CLK1-201ENST00000321356 IL23AQ9NPF7 189 aa8.1□□□□□ -1.11
CLK1-201ENST00000321356 KRCC1Q9NPI7 259 aaPredicted RBP8.1□□□□□ -1.11
CLK1-201ENST00000321356 INPP5EQ9NRR6 644 aa8.1□□□□□ -1.11
CLK1-201ENST00000321356 SIDT1Q9NXL6 827 aaKnown RBP8.1□□□□□ -1.11
CLK1-201ENST00000321356 PTGFRNQ9P2B2 879 aa8.1□□□□□ -1.11
CLK1-201ENST00000321356 SERGEFQ9UGK8 458 aa8.1□□□□□ -1.11
CLK1-201ENST00000321356 ZFR2Q9UPR6 939 aaKnown RBP8.1□□□□□ -1.11
CLK1-201ENST00000321356 SLC17A4Q9Y2C5 497 aa8.1□□□□□ -1.11
CLK1-201ENST00000321356 WDR45Q9Y484 360 aa8.1□□□□□ -1.11
CLK1-201ENST00000321356 PLEKHM1Q9Y4G2 1056 aa8.1□□□□□ -1.11
CLK1-201ENST00000321356 A0A0G2JK05 382 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 CENPVL1A0A0U1RR11 272 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 C7orf66A4D0T2 115 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 TRAPPC13A5PLN9 417 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 NOTOA8MTQ0 251 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 AGRPO00253 132 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 ARHGEF9O43307 516 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 PLPP2O43688 288 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 LANCL1O43813 399 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 SC5DO75845 299 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 PAHP00439 452 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 EIF4EP06730 217 aaKnown RBP8.09□□□□□ -1.11
CLK1-201ENST00000321356 PAICSP22234 425 aaKnown RBP8.09□□□□□ -1.11
CLK1-201ENST00000321356 F8A1P23610 371 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 RBMS1P29558 406 aaKnown RBP8.09□□□□□ -1.11
CLK1-201ENST00000321356 CMPK1P30085 196 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 BTCP35070 178 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 INPP1P49441 399 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 TNFRSF17Q02223 184 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 COL9A2Q14055 689 aaPredicted RBP8.09□□□□□ -1.11
CLK1-201ENST00000321356 PDGFRLQ15198 375 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 TRAM1Q15629 374 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 RPE65Q16518 533 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 DUSP5Q16690 384 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 CCDC58Q4VC31 144 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 IDNKQ5T6J7 187 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 PRPF38BQ5VTL8 546 aaKnown RBP8.09□□□□□ -1.11
CLK1-201ENST00000321356 HACD4Q5VWC8 232 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 ZNF57Q68EA5 555 aaPredicted RBP8.09□□□□□ -1.11
CLK1-201ENST00000321356 SDE2Q6IQ49 451 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 B3GLCTQ6Y288 498 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 WDR88Q6ZMY6 472 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 PXKQ7Z7A4 578 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 ADGRD2Q7Z7M1 963 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 PAQR7Q86WK9 346 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 SAMD14Q8IZD0 417 aaPredicted RBP8.09□□□□□ -1.11
CLK1-201ENST00000321356 RNF113BQ8IZP6 322 aaKnown RBP8.09□□□□□ -1.11
CLK1-201ENST00000321356 LRRC25Q8N386 305 aaPredicted RBP8.09□□□□□ -1.11
CLK1-201ENST00000321356 FANK1Q8TC84 345 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 DEDD2Q8WXF8 326 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 TTC9Q92623 222 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 SMARCD2Q92925 531 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 HS6ST2Q96MM7 605 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 HCAR1Q9BXC0 346 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 ZNF350Q9GZX5 532 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 ENKD1Q9H0I2 346 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 RSPH9Q9H1X1 276 aaPredicted RBP8.09□□□□□ -1.11
CLK1-201ENST00000321356 KIR3DX1Q9H7L2 352 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 MED20Q9H944 212 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 GALNT9Q9HCQ5 603 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 TRIM36Q9NQ86 728 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 ENAMQ9NRM1 1142 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 CMC2Q9NRP2 79 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 KCMF1Q9P0J7 381 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 KLF15Q9UIH9 416 aa8.09□□□□□ -1.11
CLK1-201ENST00000321356 ZC3H12DA2A288 527 aaKnown RBP8.09□□□□□ -1.12
CLK1-201ENST00000321356 AKR7A2O43488 359 aa8.09□□□□□ -1.12
CLK1-201ENST00000321356 FMO6PO60774 539 aa8.09□□□□□ -1.12
CLK1-201ENST00000321356 OR2B3O76000 313 aa8.09□□□□□ -1.12
CLK1-201ENST00000321356 PAK4O96013 591 aaPredicted RBP8.09□□□□□ -1.12
CLK1-201ENST00000321356 PRG2P13727 222 aa8.09□□□□□ -1.12
CLK1-201ENST00000321356 NPR2P20594 1047 aa8.09□□□□□ -1.12
CLK1-201ENST00000321356 MAKP20794 623 aa8.09□□□□□ -1.12
CLK1-201ENST00000321356 HTR2AP28223 471 aa8.09□□□□□ -1.12
CLK1-201ENST00000321356 SHC1P29353 583 aa8.09□□□□□ -1.12
CLK1-201ENST00000321356 EVI2BP34910 448 aa8.09□□□□□ -1.12
CLK1-201ENST00000321356 HTR2BP41595 481 aa8.09□□□□□ -1.12
CLK1-201ENST00000321356 SNRPNP63162 240 aaKnown RBP8.09□□□□□ -1.12
CLK1-201ENST00000321356 BTN3A2P78410 334 aa8.09□□□□□ -1.12
CLK1-201ENST00000321356 ENPP2Q13822 863 aa8.09□□□□□ -1.12
CLK1-201ENST00000321356 KRT33BQ14525 404 aa8.09□□□□□ -1.12
CLK1-201ENST00000321356 BTBD16Q32M84 506 aa8.09□□□□□ -1.12
CLK1-201ENST00000321356 C2orf27AQ580R0 203 aa8.09□□□□□ -1.12
CLK1-201ENST00000321356 TJAP1Q5JTD0 557 aa8.09□□□□□ -1.12
CLK1-201ENST00000321356 BICRALQ6AI39 1079 aa8.09□□□□□ -1.12
CLK1-201ENST00000321356 RPL13AP3Q6NVV1 102 aa8.09□□□□□ -1.12
CLK1-201ENST00000321356 SFXN4Q6P4A7 337 aa8.09□□□□□ -1.12
CLK1-201ENST00000321356 ZNF767PQ75MW2 155 aa8.09□□□□□ -1.12
CLK1-201ENST00000321356 ASPGQ86U10 573 aa8.09□□□□□ -1.12
CLK1-201ENST00000321356 RANBP3LQ86VV4 465 aaPredicted RBP8.09□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms