RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 FAM90A27PA6NNH2 459 aa16.25■□□□□ 0.19
SNRPA1-201ENST00000254193 H0Y3Z8 333 aa16.25■□□□□ 0.19
SNRPA1-201ENST00000254193 C19orf84I3L1E1 186 aa16.25■□□□□ 0.19
SNRPA1-201ENST00000254193 HMGN4O00479 90 aa16.25■□□□□ 0.19
SNRPA1-201ENST00000254193 HCRTR2O43614 444 aa16.25■□□□□ 0.19
SNRPA1-201ENST00000254193 STX11O75558 287 aa16.25■□□□□ 0.19
SNRPA1-201ENST00000254193 AGR2O95994 175 aa16.25■□□□□ 0.19
SNRPA1-201ENST00000254193 MSX1P28360 303 aa16.25■□□□□ 0.19
SNRPA1-201ENST00000254193 MRPL19P49406 292 aaKnown RBP16.25■□□□□ 0.19
SNRPA1-201ENST00000254193 CLDN18P56856 261 aa16.25■□□□□ 0.19
SNRPA1-201ENST00000254193 FUT5Q11128 374 aa16.25■□□□□ 0.19
SNRPA1-201ENST00000254193 NDUFAF6Q330K2 333 aa16.25■□□□□ 0.19
SNRPA1-201ENST00000254193 GTDC1Q4AE62 458 aa16.25■□□□□ 0.19
SNRPA1-201ENST00000254193 COX20Q5RI15 118 aa16.25■□□□□ 0.19
SNRPA1-201ENST00000254193 C6orf10Q5SRN2 563 aa16.25■□□□□ 0.19
SNRPA1-201ENST00000254193 MSANTD1Q6ZTZ1 278 aa16.25■□□□□ 0.19
SNRPA1-201ENST00000254193 FUNDC1Q8IVP5 155 aa16.25■□□□□ 0.19
SNRPA1-201ENST00000254193 MISPQ8IVT2 679 aa16.25■□□□□ 0.19
SNRPA1-201ENST00000254193 TNIP2Q8NFZ5 429 aa16.25■□□□□ 0.19
SNRPA1-201ENST00000254193 LILRB4Q8NHJ6 448 aa16.25■□□□□ 0.19
SNRPA1-201ENST00000254193 B4GALNT2Q8NHY0 566 aa16.25■□□□□ 0.19
SNRPA1-201ENST00000254193 ZPLD1Q8TCW7 415 aa16.25■□□□□ 0.19
SNRPA1-201ENST00000254193 ITCHQ96J02 903 aa16.25■□□□□ 0.19
SNRPA1-201ENST00000254193 HHATLQ9HCP6 504 aa16.25■□□□□ 0.19
SNRPA1-201ENST00000254193 ZNF337Q9Y3M9 751 aa16.25■□□□□ 0.19
SNRPA1-201ENST00000254193 DTNAQ9Y4J8 743 aa16.25■□□□□ 0.19
SNRPA1-201ENST00000254193 NCKAP5O14513 1909 aa16.25■□□□□ 0.19
SNRPA1-201ENST00000254193 CENPVL1A0A0U1RR11 272 aa16.24■□□□□ 0.19
SNRPA1-201ENST00000254193 PRAMEF27A3QJZ7 478 aa16.24■□□□□ 0.19
SNRPA1-201ENST00000254193 NKX2-6A6NCS4 301 aa16.24■□□□□ 0.19
SNRPA1-201ENST00000254193 TNFRSF21O75509 655 aa16.24■□□□□ 0.19
SNRPA1-201ENST00000254193 CD1EP15812 388 aa16.24■□□□□ 0.19
SNRPA1-201ENST00000254193 ZNF708P17019 499 aa16.24■□□□□ 0.19
SNRPA1-201ENST00000254193 POU3F2P20265 443 aaPredicted RBP16.24■□□□□ 0.19
SNRPA1-201ENST00000254193 ZNF117Q03924 483 aa16.24■□□□□ 0.19
SNRPA1-201ENST00000254193 RCAN2Q14206 197 aa16.24■□□□□ 0.19
SNRPA1-201ENST00000254193 SF3B4Q15427 424 aaKnown RBP eCLIP16.24■□□□□ 0.192e-9■■■■■ 35.9
SNRPA1-201ENST00000254193 TMEM44Q2T9K0 475 aa16.24■□□□□ 0.19
SNRPA1-201ENST00000254193 GLYR1Q49A26 553 aaPredicted RBP16.24■□□□□ 0.19
SNRPA1-201ENST00000254193 PDZK1Q5T2W1 519 aa16.24■□□□□ 0.19
SNRPA1-201ENST00000254193 RIPPLY2Q5TAB7 128 aa16.24■□□□□ 0.19
SNRPA1-201ENST00000254193 NSUN5P2Q63ZY6 315 aa16.24■□□□□ 0.19
SNRPA1-201ENST00000254193 SLC2A7Q6PXP3 512 aa16.24■□□□□ 0.19
SNRPA1-201ENST00000254193 CBLN3Q6UW01 205 aa16.24■□□□□ 0.19
SNRPA1-201ENST00000254193 PLXDC2Q6UX71 529 aa16.24■□□□□ 0.19
SNRPA1-201ENST00000254193 LACC1Q8IV20 430 aa16.24■□□□□ 0.19
SNRPA1-201ENST00000254193 LIX1LQ8IVB5 337 aa16.24■□□□□ 0.19
SNRPA1-201ENST00000254193 UBQLNLQ8IYU4 475 aa16.24■□□□□ 0.19
SNRPA1-201ENST00000254193 ARFGAP2Q8N6H7 521 aa16.24■□□□□ 0.19
SNRPA1-201ENST00000254193 ROPN1LQ96C74 230 aa16.24■□□□□ 0.19
SNRPA1-201ENST00000254193 NPAS1Q99742 590 aa16.24■□□□□ 0.19
SNRPA1-201ENST00000254193 PIGQQ9BRB3 760 aa16.24■□□□□ 0.19
SNRPA1-201ENST00000254193 NMUR2Q9GZQ4 415 aa16.24■□□□□ 0.19
SNRPA1-201ENST00000254193 ZNF350Q9GZX5 532 aa16.24■□□□□ 0.19
SNRPA1-201ENST00000254193 MED17Q9NVC6 651 aa16.24■□□□□ 0.19
SNRPA1-201ENST00000254193 CARD8Q9Y2G2 431 aa16.24■□□□□ 0.19
SNRPA1-201ENST00000254193 A0A0G2JND7 137 aa16.23■□□□□ 0.19
SNRPA1-201ENST00000254193 CD8B2A6NJW9 211 aa16.23■□□□□ 0.19
SNRPA1-201ENST00000254193 FAM47E-STBD1D6RA91 191 aa16.23■□□□□ 0.19
SNRPA1-201ENST00000254193 H0YC42 278 aa16.23■□□□□ 0.19
SNRPA1-201ENST00000254193 H3BML4 177 aa16.23■□□□□ 0.19
SNRPA1-201ENST00000254193 H3BNH8 94 aa16.23■□□□□ 0.19
SNRPA1-201ENST00000254193 GTPBP1O00178 669 aaKnown RBP16.23■□□□□ 0.19
SNRPA1-201ENST00000254193 NR5A2O00482 541 aa16.23■□□□□ 0.19
SNRPA1-201ENST00000254193 ANP32DO95626 131 aa16.23■□□□□ 0.19
SNRPA1-201ENST00000254193 KRT75O95678 551 aa16.23■□□□□ 0.19
SNRPA1-201ENST00000254193 TPD52P55327 224 aaPredicted RBP16.23■□□□□ 0.19
SNRPA1-201ENST00000254193 ZNF141Q15928 474 aa16.23■□□□□ 0.19
SNRPA1-201ENST00000254193 BCL2A1Q16548 175 aa16.23■□□□□ 0.19
SNRPA1-201ENST00000254193 TYW3Q6IPR3 259 aaKnown RBP16.23■□□□□ 0.19
SNRPA1-201ENST00000254193 BLOC1S3Q6QNY0 202 aa16.23■□□□□ 0.19
SNRPA1-201ENST00000254193 MTERF4Q7Z6M4 381 aaKnown RBP16.23■□□□□ 0.19
SNRPA1-201ENST00000254193 HMGN2P46Q86SG4 172 aa16.23■□□□□ 0.19
SNRPA1-201ENST00000254193 ANKFN1Q8N957 763 aa16.23■□□□□ 0.19
SNRPA1-201ENST00000254193 NAXEQ8NCW5 288 aa16.23■□□□□ 0.19
SNRPA1-201ENST00000254193 ZFP90Q8TF47 636 aa16.23■□□□□ 0.19
SNRPA1-201ENST00000254193 GTF2H4Q92759 462 aa16.23■□□□□ 0.19
SNRPA1-201ENST00000254193 AURKBQ96GD4 344 aaPredicted RBP16.23■□□□□ 0.19
SNRPA1-201ENST00000254193 CALHM2Q9HA72 323 aa16.23■□□□□ 0.19
SNRPA1-201ENST00000254193 CHST11Q9NPF2 352 aa16.23■□□□□ 0.19
SNRPA1-201ENST00000254193 CCDC167Q9P0B6 97 aa16.23■□□□□ 0.19
SNRPA1-201ENST00000254193 WDR45Q9Y484 360 aa16.23■□□□□ 0.19
SNRPA1-201ENST00000254193 PCNX1Q96RV3 2341 aa16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 A0A087WZY1 265 aa16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 SERINC4A6NH21 518 aa16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 CLCA1A8K7I4 914 aa16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 HSPB2A8KAH6 182 aa16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 SEC14L5O43304 696 aa16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 UGT2B17O75795 530 aa16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 H6PDO95479 791 aa16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 SNRPB2P08579 225 aaKnown RBP16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 ZCCHC18P0CG32 403 aa16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 PEPDP12955 493 aa16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 NCF2P19878 526 aaPredicted RBP16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 CEACAM8P31997 349 aaPredicted RBP16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 TIMP3P35625 211 aa16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 ATP4BP51164 291 aa16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 ZNF41P51814 821 aaPredicted RBP16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 SUCLG1P53597 346 aaKnown RBP16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 MVDP53602 400 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms