RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 REM1O75628 298 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 CT45A8P0DMV1 189 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 CT45A9P0DMV2 189 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 SAGP10523 405 aaPredicted RBP3.18□□□□□ -1.9
LIG4-205ENST00000614526 IFI30P13284 250 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 HPGDP15428 266 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 IFNA8P32881 189 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 GPR3P46089 330 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 STT3AP46977 705 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 GIPRP48546 466 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 NR0B1P51843 470 aaKnown RBP3.18□□□□□ -1.9
LIG4-205ENST00000614526 ZNF136P52737 540 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 VBP1P61758 197 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 SKP1P63208 163 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 PLAURQ03405 335 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 ST3GAL3Q11203 375 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 TRAM2Q15035 370 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 NR0B2Q15466 257 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 MED22Q15528 200 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 PROX2Q3B8N5 592 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 CT45A2Q5DJT8 189 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 PWWP2BQ6NUJ5 590 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 PAQR6Q6TCH4 344 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 MED25Q71SY5 747 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 IGFN1Q86VF2 1251 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 ZNF595Q8IYB9 648 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 TMCO5AQ8N6Q1 288 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 MORN4Q8NDC4 146 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 OR8D4Q8NGM9 314 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 FAR1Q8WVX9 515 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 DIO2Q92813 273 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 PMEPA1Q969W9 287 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 ZNF501Q96CX3 271 aaPredicted RBP3.18□□□□□ -1.9
LIG4-205ENST00000614526 COG8Q96MW5 612 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 VSTM2LQ96N03 204 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 DEPDC7Q96QD5 511 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 ARHGDIGQ99819 225 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 BTBD2Q9BX70 525 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 TSSK6Q9BXA6 273 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 NXF5Q9H1B4 397 aaKnown RBP3.18□□□□□ -1.9
LIG4-205ENST00000614526 ARRDC1-AS1Q9H2J1 176 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 ZBTB20Q9HC78 741 aaPredicted RBP3.18□□□□□ -1.9
LIG4-205ENST00000614526 Q9N2J8 555 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 DUSP22Q9NRW4 184 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 LANCL2Q9NS86 450 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 NDUFA13Q9P0J0 144 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 EPHA6Q9UF33 1036 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 CLEC2DQ9UHP7 191 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 MGAT4BQ9UQ53 548 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 CARD8Q9Y2G2 431 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 CSNK1G3Q9Y6M4 447 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 R4GN57 208 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 RIF1Q5UIP0 2472 aaKnown RBP3.18□□□□□ -1.9
LIG4-205ENST00000614526 SPTBN2O15020 2390 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 ASPMQ8IZT6 3477 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 PTPRZ1P23471 2315 aaPredicted RBP3.18□□□□□ -1.9
LIG4-205ENST00000614526 DSPPQ9NZW4 1301 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 TRAV27A0A087WT01 109 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 A0A087WV62 115 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 LY6G6EA0A0G2JKS1 128 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 LOC100506127A0A0U1RQW1 187 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 ZC3H12DA2A288 527 aaKnown RBP3.18□□□□□ -1.9
LIG4-205ENST00000614526 CDHR4A6H8M9 788 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 ZAR1LA6NP61 321 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 ZNF99A8MXY4 864 aaPredicted RBP3.18□□□□□ -1.9
LIG4-205ENST00000614526 LRRTM2O43300 516 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 OIP5O43482 229 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 COQ9O75208 318 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 RFPL3O75679 317 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 CPNE6O95741 557 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 ADAP00813 363 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 TP53P04637 393 aaPredicted RBP3.18□□□□□ -1.9
LIG4-205ENST00000614526 DBIP07108 87 aaKnown RBP3.18□□□□□ -1.9
LIG4-205ENST00000614526 CCDC159P0C7I6 412 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 CCL4P13236 92 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 NID1P14543 1247 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 PCMT1P22061 227 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 PRKAR1BP31321 381 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 SLC9A3P48764 834 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 SLC16A1P53985 500 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 SMIM11AP58511 58 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 EEF1A1P68104 462 aaKnown RBP3.18□□□□□ -1.9
LIG4-205ENST00000614526 GPLD1P80108 840 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 IL18R1Q13478 541 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 LCN10Q6JVE6 187 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 CBLN3Q6UW01 205 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 SLC34A3Q8N130 599 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 D2HGDHQ8N465 521 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 BCORP1Q8N888 145 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 OR4C6Q8NH72 309 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 IFI44Q8TCB0 444 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 PHOSPHO1Q8TCT1 267 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 SMAP2Q8WU79 429 aaPredicted RBP3.18□□□□□ -1.9
LIG4-205ENST00000614526 LRR1Q96L50 414 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 SAMD8Q96LT4 415 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 CCDC74BQ96LY2 380 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 OR5M11Q96RB7 305 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 PITX2Q99697 317 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 NUDT9Q9BW91 350 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 YTHDF1Q9BYJ9 559 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms