RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 ZNF671Q8TAW3 534 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 UBALD1Q8TB05 177 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 RAB3IPQ96QF0 476 aaPredicted RBP0.5□□□□□ -2.33
CEP290-208ENST00000604024 NAA11Q9BSU3 229 aaPredicted RBP0.5□□□□□ -2.33
CEP290-208ENST00000604024 ZNF665Q9H7R5 613 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 LHX9Q9NQ69 397 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 GDF3Q9NR23 364 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 PCDHGB4Q9UN71 923 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 RFNGQ9Y644 331 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 PTPRZ1P23471 2315 aaPredicted RBP0.5□□□□□ -2.33
CEP290-208ENST00000604024 MAP3K19Q56UN5 1328 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 PIK3C2BO00750 1634 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 ANKRD36BQ8N2N9 1353 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 AKAP11Q9UKA4 1901 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 SCN7AQ01118 1682 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 NAIPQ13075 1403 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 MYOM3Q5VTT5 1437 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 KNDC1Q76NI1 1749 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 MRC1P22897 1456 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 FAM186AA6NE01 2351 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 C2CD3Q4AC94 2353 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 HERC2O95714 4834 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 GTF3C1Q12789 2109 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 SBF2Q86WG5 1849 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 A0A096LNJ9 63 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 FAM149AA5PLN7 773 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 NPIPA2E9PIF3 369 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 C11orf98E9PRG8 122 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 H0Y626 953 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 RIPK2O43353 540 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 TRIM16O95361 564 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 SERPINF2P08697 491 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 GCFC2P16383 781 aaKnown RBP0.5□□□□□ -2.33
CEP290-208ENST00000604024 RPS12P25398 132 aaKnown RBP0.5□□□□□ -2.33
CEP290-208ENST00000604024 PRDX3P30048 256 aaKnown RBP0.5□□□□□ -2.33
CEP290-208ENST00000604024 NSFP46459 744 aaKnown RBP0.5□□□□□ -2.33
CEP290-208ENST00000604024 CALD1Q05682 793 aaKnown RBP0.5□□□□□ -2.33
CEP290-208ENST00000604024 BMP2KLQ5H9B9 411 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 CASC10Q5T4H9 136 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 LUZP1Q86V48 1076 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 C6orf223Q8N319 242 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 SAP25Q8TEE9 199 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 SMARCD2Q92925 531 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 ZNF641Q96N77 438 aaPredicted RBP0.5□□□□□ -2.33
CEP290-208ENST00000604024 ZNF2Q9BSG1 426 aaPredicted RBP0.5□□□□□ -2.33
CEP290-208ENST00000604024 RABEP2Q9H5N1 569 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 SH2D2AQ9NP31 389 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 CFDP1Q9UEE9 299 aaPredicted RBP0.5□□□□□ -2.33
CEP290-208ENST00000604024 OPN4Q9UHM6 478 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 CTNNA3Q9UI47 895 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 ZNF225Q9UK10 706 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 GMEB2Q9UKD1 530 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 TMED7Q9Y3B3 224 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 ANKRD17O75179 2603 aaKnown RBP0.5□□□□□ -2.33
CEP290-208ENST00000604024 CASP8AP2Q9UKL3 1982 aa0.5□□□□□ -2.33
CEP290-208ENST00000604024 ABCC11Q96J66 1382 aa0.49□□□□□ -2.33
CEP290-208ENST00000604024 USP47Q96K76 1375 aa0.49□□□□□ -2.33
CEP290-208ENST00000604024 DOPEY1Q5JWR5 2465 aa0.49□□□□□ -2.33
CEP290-208ENST00000604024 KDM3BQ7LBC6 1761 aa0.49□□□□□ -2.33
CEP290-208ENST00000604024 ANKRD11Q6UB99 2663 aaPredicted RBP0.49□□□□□ -2.33
CEP290-208ENST00000604024 DICER1Q9UPY3 1922 aaKnown RBP0.49□□□□□ -2.33
CEP290-208ENST00000604024 E9PCH4 1651 aa0.49□□□□□ -2.33
CEP290-208ENST00000604024 PSMB11A5LHX3 300 aa0.49□□□□□ -2.33
CEP290-208ENST00000604024 EI24O14681 340 aa0.49□□□□□ -2.33
CEP290-208ENST00000604024 CHEK1O14757 476 aa0.49□□□□□ -2.33
CEP290-208ENST00000604024 REC8O95072 547 aa0.49□□□□□ -2.33
CEP290-208ENST00000604024 PGK1P00558 417 aa0.49□□□□□ -2.33
CEP290-208ENST00000604024 TIMP1P01033 207 aa0.49□□□□□ -2.33
CEP290-208ENST00000604024 MMP1P03956 469 aa0.49□□□□□ -2.33
CEP290-208ENST00000604024 VIMP08670 466 aaKnown RBP0.49□□□□□ -2.33
CEP290-208ENST00000604024 CCDC175P0C221 793 aa0.49□□□□□ -2.33
CEP290-208ENST00000604024 ZNF286BP0CG31 522 aa0.49□□□□□ -2.33
CEP290-208ENST00000604024 DLSTP36957 453 aa0.49□□□□□ -2.33
CEP290-208ENST00000604024 BCL2L1Q07817 233 aa0.49□□□□□ -2.33
CEP290-208ENST00000604024 SIGLEC14Q08ET2 396 aa0.49□□□□□ -2.33
CEP290-208ENST00000604024 AIMP1Q12904 312 aaKnown RBP0.49□□□□□ -2.33
CEP290-208ENST00000604024 COG2Q14746 738 aa0.49□□□□□ -2.33
CEP290-208ENST00000604024 KYNUQ16719 465 aa0.49□□□□□ -2.33
CEP290-208ENST00000604024 LRRC36Q1X8D7 754 aa0.49□□□□□ -2.33
CEP290-208ENST00000604024 CST9Q5W186 159 aa0.49□□□□□ -2.33
CEP290-208ENST00000604024 ARMCX2Q7L311 632 aa0.49□□□□□ -2.33
CEP290-208ENST00000604024 ABHD12BQ7Z5M8 362 aaPredicted RBP0.49□□□□□ -2.33
CEP290-208ENST00000604024 RANBP3LQ86VV4 465 aaPredicted RBP0.49□□□□□ -2.33
CEP290-208ENST00000604024 SIAH3Q8IW03 269 aa0.49□□□□□ -2.33
CEP290-208ENST00000604024 LAX1Q8IWV1 398 aa0.49□□□□□ -2.33
CEP290-208ENST00000604024 UBALD2Q8IYN6 164 aa0.49□□□□□ -2.33
CEP290-208ENST00000604024 HEXDCQ8WVB3 486 aa0.49□□□□□ -2.33
CEP290-208ENST00000604024 NAP1L4Q99733 375 aaKnown RBP0.49□□□□□ -2.33
CEP290-208ENST00000604024 FEM1AQ9BSK4 669 aa0.49□□□□□ -2.33
CEP290-208ENST00000604024 KATNB1Q9BVA0 655 aa0.49□□□□□ -2.33
CEP290-208ENST00000604024 UTP14AQ9BVJ6 771 aaKnown RBP0.49□□□□□ -2.33
CEP290-208ENST00000604024 ING2Q9H160 280 aa0.49□□□□□ -2.33
CEP290-208ENST00000604024 C11orf49Q9H6J7 331 aa0.49□□□□□ -2.33
CEP290-208ENST00000604024 KAT8Q9H7Z6 458 aaKnown RBP0.49□□□□□ -2.33
CEP290-208ENST00000604024 PFDN4Q9NQP4 134 aa0.49□□□□□ -2.33
CEP290-208ENST00000604024 STOX2Q9P2F5 926 aaPredicted RBP0.49□□□□□ -2.33
CEP290-208ENST00000604024 PRPF19Q9UMS4 504 aaKnown RBP0.49□□□□□ -2.33
CEP290-208ENST00000604024 NEUROG3Q9Y4Z2 214 aa0.49□□□□□ -2.33
CEP290-208ENST00000604024 OR1A2Q9Y585 309 aa0.49□□□□□ -2.33
CEP290-208ENST00000604024 CEP152O94986 1710 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms