RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 EFCAB7A8K855 629 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 H3BMH7 237 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 POLR1CO15160 346 aaPredicted RBP9.63□□□□□ -0.87
VPS25-203ENST00000589520 PRODHO43272 600 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 KLF4O43474 513 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 RCBTB2O95199 551 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 MED26O95402 600 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 IFNA16P05015 189 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 ANKRD34CP0C6C1 535 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 GIMD1P0DJR0 217 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 FUT4P22083 530 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 CALRP27797 417 aaKnown RBP9.63□□□□□ -0.87
VPS25-203ENST00000589520 EPHA8P29322 1005 aaPredicted RBP9.63□□□□□ -0.87
VPS25-203ENST00000589520 RORAP35398 523 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 UGT2B10P36537 528 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 ADH7P40394 386 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 MAP2K4P45985 399 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 DHPSP49366 369 aaPredicted RBP9.63□□□□□ -0.87
VPS25-203ENST00000589520 ZXDAP98168 799 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 PRKCDQ05655 676 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 BNIP3Q12983 259 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 TMED1Q13445 227 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 DCTN2Q13561 401 aaKnown RBP9.63□□□□□ -0.87
VPS25-203ENST00000589520 FGFBP1Q14512 234 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 SNAPC1Q16533 368 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 DGUOKQ16854 277 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 TIGD6Q17RP2 521 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 MRPL2Q5T653 305 aaKnown RBP9.63□□□□□ -0.87
VPS25-203ENST00000589520 NKAIN2Q5VXU1 208 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 TMEM236Q5W0B7 351 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 FIGNL1Q6PIW4 674 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 CCDC81Q6ZN84 652 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 WDR53Q7Z5U6 358 aaPredicted RBP9.63□□□□□ -0.87
VPS25-203ENST00000589520 BPHLQ86WA6 291 aaPredicted RBP9.63□□□□□ -0.87
VPS25-203ENST00000589520 SLC35F3Q8IY50 421 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 LSMEM1Q8N8F7 131 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 CEP76Q8TAP6 659 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 TMEM163Q8TC26 289 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 GAB3Q8WWW8 586 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 DAZLQ92904 295 aaKnown RBP9.63□□□□□ -0.87
VPS25-203ENST00000589520 RFKQ969G6 155 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 PTCHD1Q96NR3 888 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 ZNF304Q9HCX3 659 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 MKKSQ9NPJ1 570 aaPredicted RBP9.63□□□□□ -0.87
VPS25-203ENST00000589520 CHCHD3Q9NX63 227 aaKnown RBP9.63□□□□□ -0.87
VPS25-203ENST00000589520 SELENONQ9NZV5 590 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 AASSQ9UDR5 926 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 CBLCQ9ULV8 474 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.63□□□□□ -0.87
VPS25-203ENST00000589520 BAIAP2Q9UQB8 552 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 SLC35A3Q9Y2D2 325 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 MED31Q9Y3C7 131 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 CLDN16Q9Y5I7 305 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 CDH10Q9Y6N8 788 aa9.63□□□□□ -0.87
VPS25-203ENST00000589520 A0A1W2PPW3 197 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 GXYLT2A0PJZ3 443 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 C17orf105B2RV13 164 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 NPIPB9F8W1W9 429 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 LAMTOR5O43504 91 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 CHP2O43745 196 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 TLX2O43763 284 aaPredicted RBP9.62□□□□□ -0.87
VPS25-203ENST00000589520 ENTPD6O75354 484 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 IGF2P01344 180 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 RPLP0P05388 317 aaKnown RBP9.62□□□□□ -0.87
VPS25-203ENST00000589520 CTSBP07858 339 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 STSP08842 583 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 HBQ1P09105 142 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 CD36P16671 472 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 BMP7P18075 431 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 C21orf33P30042 268 aaPredicted RBP9.62□□□□□ -0.87
VPS25-203ENST00000589520 PPICP45877 212 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 CTBP2P56545 445 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 BTG2P78543 158 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 MAT1AQ00266 395 aaKnown RBP9.62□□□□□ -0.87
VPS25-203ENST00000589520 RAB40BQ12829 278 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 ELAVL1Q15717 326 aaKnown RBP9.62□□□□□ -0.87
VPS25-203ENST00000589520 MAPK14Q16539 360 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 CTF1Q16619 201 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 AMZ1Q400G9 498 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 CCNJQ5T5M9 372 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 PEAR1Q5VY43 1037 aaPredicted RBP9.62□□□□□ -0.87
VPS25-203ENST00000589520 ULK3Q6PHR2 472 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 GDPGP1Q6ZNW5 385 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 DGAT2L6Q6ZPD8 337 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 SLC16A12Q6ZSM3 486 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 TTLL10Q6ZVT0 673 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 TMPRSS11FQ6ZWK6 438 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 NKAIN4Q8IVV8 208 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 NRMQ8IXM6 262 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 TCEANCQ8N8B7 351 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 ZNF615Q8N8J6 731 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 ZNF527Q8NB42 609 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 RCBTB1Q8NDN9 531 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 SIMC1Q8NDZ2 872 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 PLPP5Q8NEB5 264 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 PROKR2Q8NFJ6 384 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 OR2T33Q8NG76 320 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 OR9Q1Q8NGQ5 310 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 OR4C6Q8NH72 309 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 OR14A16Q8NHC5 309 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms