RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 RBM24Q9BX46 236 aaKnown RBP11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 POLDIP3Q9BY77 421 aaKnown RBP11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 NUF2Q9BZD4 464 aa11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 ACBD3Q9H3P7 528 aa11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 SIRT3Q9NTG7 399 aaPredicted RBP11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 DNAJB12Q9NXW2 375 aaKnown RBP11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 NKIRAS1Q9NYS0 192 aa11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 NTMQ9P121 344 aa11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 VDAC3Q9Y277 283 aa11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 KIAA1549Q9HCM3 1950 aa11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 OR2M5A3KFT3 312 aa11.47□□□□□ -0.57
NPLOC4-213ENST00000573519 TUBAL3A6NHL2 446 aa11.47□□□□□ -0.57
NPLOC4-213ENST00000573519 SLC22A20A6NK97 555 aa11.47□□□□□ -0.57
NPLOC4-213ENST00000573519 H0YC42 278 aa11.47□□□□□ -0.57
NPLOC4-213ENST00000573519 SCDO00767 359 aa11.47□□□□□ -0.57
NPLOC4-213ENST00000573519 TGM6O95932 706 aa11.47□□□□□ -0.57
NPLOC4-213ENST00000573519 IL18BPO95998 194 aa11.47□□□□□ -0.57
NPLOC4-213ENST00000573519 PRPS1L1P21108 318 aa11.47□□□□□ -0.57
NPLOC4-213ENST00000573519 SOAT1P35610 550 aa11.47□□□□□ -0.57
NPLOC4-213ENST00000573519 CPOXP36551 454 aa11.47□□□□□ -0.57
NPLOC4-213ENST00000573519 DIO3P55073 304 aa11.47□□□□□ -0.57
NPLOC4-213ENST00000573519 TPD52P55327 224 aaPredicted RBP11.47□□□□□ -0.57
NPLOC4-213ENST00000573519 EEFSECP57772 596 aaKnown RBP11.47□□□□□ -0.57
NPLOC4-213ENST00000573519 EMX2Q04743 252 aa11.47□□□□□ -0.57
NPLOC4-213ENST00000573519 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.47□□□□□ -0.57
NPLOC4-213ENST00000573519 LSM12Q3MHD2 195 aaKnown RBP11.47□□□□□ -0.57
NPLOC4-213ENST00000573519 ZAR1Q86SH2 424 aa11.47□□□□□ -0.57
NPLOC4-213ENST00000573519 NATD1Q8N6N6 113 aa11.47□□□□□ -0.57
NPLOC4-213ENST00000573519 CNEP1R1Q8N9A8 125 aa11.47□□□□□ -0.57
NPLOC4-213ENST00000573519 OR56A1Q8NGH5 318 aa11.47□□□□□ -0.57
NPLOC4-213ENST00000573519 OR5AK3PQ8NH89 298 aa11.47□□□□□ -0.57
NPLOC4-213ENST00000573519 GOT1L1Q8NHS2 421 aaPredicted RBP11.47□□□□□ -0.57
NPLOC4-213ENST00000573519 LINC01560Q8TB33 94 aa11.47□□□□□ -0.57
NPLOC4-213ENST00000573519 ADAMTS15Q8TE58 950 aa11.47□□□□□ -0.57
NPLOC4-213ENST00000573519 SH3YL1Q96HL8 342 aaPredicted RBP11.47□□□□□ -0.57
NPLOC4-213ENST00000573519 UCN2Q96RP3 112 aa11.47□□□□□ -0.57
NPLOC4-213ENST00000573519 DUSP26Q9BV47 211 aa11.47□□□□□ -0.57
NPLOC4-213ENST00000573519 BTBD2Q9BX70 525 aa11.47□□□□□ -0.57
NPLOC4-213ENST00000573519 PINK1Q9BXM7 581 aa11.47□□□□□ -0.57
NPLOC4-213ENST00000573519 CXorf36Q9H7Y0 433 aa11.47□□□□□ -0.57
NPLOC4-213ENST00000573519 FBXO34Q9NWN3 711 aa11.47□□□□□ -0.57
NPLOC4-213ENST00000573519 GIN1Q9NXP7 522 aa11.47□□□□□ -0.57
NPLOC4-213ENST00000573519 NOP53Q9NZM5 478 aaKnown RBP11.47□□□□□ -0.57
NPLOC4-213ENST00000573519 FAF1Q9UNN5 650 aaPredicted RBP11.47□□□□□ -0.57
NPLOC4-213ENST00000573519 FREM3P0C091 2139 aa11.47□□□□□ -0.57
NPLOC4-213ENST00000573519 PKDREJQ9NTG1 2253 aa11.46□□□□□ -0.57
NPLOC4-213ENST00000573519 ALG1L2C9J202 215 aa11.46□□□□□ -0.57
NPLOC4-213ENST00000573519 LINC01387J3KSC0 135 aa11.46□□□□□ -0.57
NPLOC4-213ENST00000573519 HCRTR2O43614 444 aa11.46□□□□□ -0.57
NPLOC4-213ENST00000573519 CTAG2O75638 210 aa11.46□□□□□ -0.57
NPLOC4-213ENST00000573519 SMNDC1O75940 238 aaKnown RBP eCLIP11.46□□□□□ -0.573e-8■□□□□ 9.1
NPLOC4-213ENST00000573519 KITP10721 976 aa11.46□□□□□ -0.57
NPLOC4-213ENST00000573519 ATP6V1C1P21283 382 aa11.46□□□□□ -0.57
NPLOC4-213ENST00000573519 TBXA2RP21731 343 aa11.46□□□□□ -0.57
NPLOC4-213ENST00000573519 RNF144AP50876 292 aaPredicted RBP11.46□□□□□ -0.57
NPLOC4-213ENST00000573519 ZNF41P51814 821 aaPredicted RBP11.46□□□□□ -0.57
NPLOC4-213ENST00000573519 SUCLG1P53597 346 aaKnown RBP11.46□□□□□ -0.57
NPLOC4-213ENST00000573519 CLDN20P56880 219 aa11.46□□□□□ -0.57
NPLOC4-213ENST00000573519 SGCBQ16585 318 aa11.46□□□□□ -0.57
NPLOC4-213ENST00000573519 OR2A2Q6IF42 318 aa11.46□□□□□ -0.57
NPLOC4-213ENST00000573519 CDC73Q6P1J9 531 aa11.46□□□□□ -0.57
NPLOC4-213ENST00000573519 FAM110BQ8TC76 370 aa11.46□□□□□ -0.57
NPLOC4-213ENST00000573519 FAM222BQ8WU58 562 aa11.46□□□□□ -0.57
NPLOC4-213ENST00000573519 COQ8BQ96D53 544 aa11.46□□□□□ -0.57
NPLOC4-213ENST00000573519 STACQ99469 402 aa11.46□□□□□ -0.57
NPLOC4-213ENST00000573519 ACTRT3Q9BYD9 372 aa11.46□□□□□ -0.57
NPLOC4-213ENST00000573519 BHLHE41Q9C0J9 482 aaPredicted RBP11.46□□□□□ -0.57
NPLOC4-213ENST00000573519 CLEC4MQ9H2X3 399 aaPredicted RBP11.46□□□□□ -0.57
NPLOC4-213ENST00000573519 PIGUQ9H490 435 aa11.46□□□□□ -0.57
NPLOC4-213ENST00000573519 NEUROD4Q9HD90 331 aa11.46□□□□□ -0.57
NPLOC4-213ENST00000573519 UBQLN4Q9NRR5 601 aa11.46□□□□□ -0.57
NPLOC4-213ENST00000573519 DUSP22Q9NRW4 184 aa11.46□□□□□ -0.57
NPLOC4-213ENST00000573519 GALNT8Q9NY28 637 aa11.46□□□□□ -0.57
NPLOC4-213ENST00000573519 JKAMPQ9P055 326 aa11.46□□□□□ -0.57
NPLOC4-213ENST00000573519 MARCOQ9UEW3 520 aaPredicted RBP11.46□□□□□ -0.57
NPLOC4-213ENST00000573519 HAO1Q9UJM8 370 aa11.46□□□□□ -0.57
NPLOC4-213ENST00000573519 CREBBPQ92793 2442 aa11.46□□□□□ -0.58
NPLOC4-213ENST00000573519 OTOGQ6ZRI0 2925 aa11.46□□□□□ -0.58
NPLOC4-213ENST00000573519 IGLV3-32A0A0A0MS00 114 aa11.45□□□□□ -0.58
NPLOC4-213ENST00000573519 NPIPA5A0A0B4J1W7 369 aa11.45□□□□□ -0.58
NPLOC4-213ENST00000573519 A0A1W2PNV4 684 aa11.45□□□□□ -0.58
NPLOC4-213ENST00000573519 A6NNC1 897 aa11.45□□□□□ -0.58
NPLOC4-213ENST00000573519 NPIPA7E9PJI5 369 aa11.45□□□□□ -0.58
NPLOC4-213ENST00000573519 EIF1AYO14602 144 aaKnown RBP11.45□□□□□ -0.58
NPLOC4-213ENST00000573519 SNNO75324 88 aaPredicted RBP11.45□□□□□ -0.58
NPLOC4-213ENST00000573519 SNUPNO95149 360 aaKnown RBP11.45□□□□□ -0.58
NPLOC4-213ENST00000573519 OPN1LWP04000 364 aa11.45□□□□□ -0.58
NPLOC4-213ENST00000573519 NGFRP08138 427 aa11.45□□□□□ -0.58
NPLOC4-213ENST00000573519 KRT16P08779 473 aa11.45□□□□□ -0.58
NPLOC4-213ENST00000573519 NPIPA8P0DM63 369 aa11.45□□□□□ -0.58
NPLOC4-213ENST00000573519 SLC18A1P54219 525 aa11.45□□□□□ -0.58
NPLOC4-213ENST00000573519 CLDN15P56746 228 aa11.45□□□□□ -0.58
NPLOC4-213ENST00000573519 CLDN8P56748 225 aa11.45□□□□□ -0.58
NPLOC4-213ENST00000573519 RPS3AP61247 264 aaKnown RBP11.45□□□□□ -0.58
NPLOC4-213ENST00000573519 SIRPAP78324 504 aa11.45□□□□□ -0.58
NPLOC4-213ENST00000573519 PON3Q15166 354 aa11.45□□□□□ -0.58
NPLOC4-213ENST00000573519 GLYR1Q49A26 553 aaPredicted RBP11.45□□□□□ -0.58
NPLOC4-213ENST00000573519 DCST2Q5T1A1 773 aa11.45□□□□□ -0.58
NPLOC4-213ENST00000573519 AGBL2Q5U5Z8 902 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms