RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 ZC4H2Q9NQZ6 224 aa16.45■□□□□ 0.22
RAB40C-205ENST00000539661 SEMA4GQ9NTN9 838 aa16.45■□□□□ 0.22
RAB40C-205ENST00000539661 TDP1Q9NUW8 608 aa16.45■□□□□ 0.22
RAB40C-205ENST00000539661 VCANP13611 3396 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 A8MUA0 341 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 CTDSPLO15194 276 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 PEX14O75381 377 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 ALPPL2P10696 532 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 TAS2R43P59537 309 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 RPS7P62081 194 aaKnown RBP16.44■□□□□ 0.22
RAB40C-205ENST00000539661 TRA2BP62995 288 aaKnown RBP16.44■□□□□ 0.22
RAB40C-205ENST00000539661 DPPA4Q7L190 304 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 CXXC5Q7LFL8 322 aaKnown RBP16.44■□□□□ 0.22
RAB40C-205ENST00000539661 SZRD1Q7Z422 152 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 PXKQ7Z7A4 578 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 OR51G2Q8NGK0 314 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 DACT3Q96B18 629 aaPredicted RBP16.44■□□□□ 0.22
RAB40C-205ENST00000539661 LCORQ96JN0 433 aaPredicted RBP16.44■□□□□ 0.22
RAB40C-205ENST00000539661 TIMP4Q99727 224 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 REG4Q9BYZ8 158 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 HINT3Q9NQE9 182 aaKnown RBP16.44■□□□□ 0.22
RAB40C-205ENST00000539661 ABRACLQ9P1F3 81 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 SLC13A4Q9UKG4 626 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 A0A1B0GVC2 190 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 MFSD2BA6NFX1 497 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 A6NIN4 97 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 SOCS6O14544 535 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 PPM1BO75688 479 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 TPPPO94811 219 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 SAGP10523 405 aaPredicted RBP16.44■□□□□ 0.22
RAB40C-205ENST00000539661 CCR6P51684 374 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 OR10A3P58181 314 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 FUT5Q11128 374 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 SNTB2Q13425 540 aaKnown RBP16.44■□□□□ 0.22
RAB40C-205ENST00000539661 KLF9Q13886 244 aaPredicted RBP16.44■□□□□ 0.22
RAB40C-205ENST00000539661 OPCMLQ14982 345 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 ADCK2Q7Z695 626 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 CPOQ8IVL8 374 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 CMTM8Q8IZV2 173 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 SFXN5Q8TD22 340 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 AMDHD1Q96NU7 426 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 SHARPINQ9H0F6 387 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 FN3KQ9H479 309 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 GLIPR2Q9H4G4 154 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 IL21Q9HBE4 155 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 HMX1Q9NP08 348 aaPredicted RBP16.44■□□□□ 0.22
RAB40C-205ENST00000539661 HCN3Q9P1Z3 774 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 CAMK2AQ9UQM7 478 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 KCNMB2Q9Y691 235 aa16.44■□□□□ 0.22
RAB40C-205ENST00000539661 KRBOX1C9JBD0 128 aa16.43■□□□□ 0.22
RAB40C-205ENST00000539661 TOR1AO14656 332 aa16.43■□□□□ 0.22
RAB40C-205ENST00000539661 PGRMC2O15173 223 aa16.43■□□□□ 0.22
RAB40C-205ENST00000539661 TIMP2P16035 220 aa16.43■□□□□ 0.22
RAB40C-205ENST00000539661 CAPZA2P47755 286 aa16.43■□□□□ 0.22
RAB40C-205ENST00000539661 TLE2Q04725 743 aa16.43■□□□□ 0.22
RAB40C-205ENST00000539661 FAM69AQ5T7M9 428 aa16.43■□□□□ 0.22
RAB40C-205ENST00000539661 OVCH2Q7RTZ1 564 aa16.43■□□□□ 0.22
RAB40C-205ENST00000539661 NRSN1Q8IZ57 195 aa16.43■□□□□ 0.22
RAB40C-205ENST00000539661 BMPERQ8N8U9 685 aa16.43■□□□□ 0.22
RAB40C-205ENST00000539661 AIF1LQ9BQI0 150 aa16.43■□□□□ 0.22
RAB40C-205ENST00000539661 SDHAF2Q9NX18 166 aa16.43■□□□□ 0.22
RAB40C-205ENST00000539661 SCML1Q9UN30 329 aa16.43■□□□□ 0.22
RAB40C-205ENST00000539661 RWDD3Q9Y3V2 267 aa16.43■□□□□ 0.22
RAB40C-205ENST00000539661 MYO15AQ9UKN7 3530 aa16.43■□□□□ 0.22
RAB40C-205ENST00000539661 A0A1W2PQ45 241 aaPredicted RBP16.43■□□□□ 0.22
RAB40C-205ENST00000539661 A0A1W2PQY0 241 aa16.43■□□□□ 0.22
RAB40C-205ENST00000539661 A0A1W2PRG6 482 aa16.43■□□□□ 0.22
RAB40C-205ENST00000539661 TRABD2BA6NFA1 517 aa16.43■□□□□ 0.22
RAB40C-205ENST00000539661 SC5DO75845 299 aa16.43■□□□□ 0.22
RAB40C-205ENST00000539661 MT-ND5P03915 603 aa16.43■□□□□ 0.22
RAB40C-205ENST00000539661 NDUFV2P19404 249 aa16.43■□□□□ 0.22
RAB40C-205ENST00000539661 NUP62P37198 522 aaPredicted RBP16.43■□□□□ 0.22
RAB40C-205ENST00000539661 BLVRAP53004 296 aa16.43■□□□□ 0.22
RAB40C-205ENST00000539661 ARFIP1P53367 373 aa16.43■□□□□ 0.22
RAB40C-205ENST00000539661 SLC7A9P82251 487 aa16.43■□□□□ 0.22
RAB40C-205ENST00000539661 DGCR2P98153 550 aa16.43■□□□□ 0.22
RAB40C-205ENST00000539661 ZNF311Q5JNZ3 666 aa16.43■□□□□ 0.22
RAB40C-205ENST00000539661 MEPCEQ7L2J0 689 aaKnown RBP16.43■□□□□ 0.22
RAB40C-205ENST00000539661 CEACAM19Q7Z692 300 aa16.43■□□□□ 0.22
RAB40C-205ENST00000539661 FAM98AQ8NCA5 519 aaKnown RBP16.43■□□□□ 0.22
RAB40C-205ENST00000539661 ABHD4Q8TB40 342 aa16.43■□□□□ 0.22
RAB40C-205ENST00000539661 VN1R3Q9BXE9 311 aa16.43■□□□□ 0.22
RAB40C-205ENST00000539661 ZCCHC2Q9C0B9 1178 aaKnown RBP16.43■□□□□ 0.22
RAB40C-205ENST00000539661 C20orf85Q9H1P6 137 aa16.43■□□□□ 0.22
RAB40C-205ENST00000539661 METTL17Q9H7H0 456 aaPredicted RBP16.43■□□□□ 0.22
RAB40C-205ENST00000539661 TMPRSS11DO60235 418 aa16.42■□□□□ 0.22
RAB40C-205ENST00000539661 LILRB5O75023 590 aa16.42■□□□□ 0.22
RAB40C-205ENST00000539661 XPAP23025 273 aaPredicted RBP16.42■□□□□ 0.22
RAB40C-205ENST00000539661 TSPAN5P62079 268 aa16.42■□□□□ 0.22
RAB40C-205ENST00000539661 RPL6Q02878 288 aaKnown RBP16.42■□□□□ 0.22
RAB40C-205ENST00000539661 NDUFAF5Q5TEU4 345 aa16.42■□□□□ 0.22
RAB40C-205ENST00000539661 C3P1Q6ZMU1 363 aa16.42■□□□□ 0.22
RAB40C-205ENST00000539661 CHMP1BQ7LBR1 199 aa16.42■□□□□ 0.22
RAB40C-205ENST00000539661 OLIG3Q7RTU3 272 aa16.42■□□□□ 0.22
RAB40C-205ENST00000539661 C17orf64Q86WR6 236 aa16.42■□□□□ 0.22
RAB40C-205ENST00000539661 FAM71CQ8NEG0 241 aa16.42■□□□□ 0.22
RAB40C-205ENST00000539661 BEST4Q8NFU0 473 aa16.42■□□□□ 0.22
RAB40C-205ENST00000539661 RGMAQ96B86 450 aa16.42■□□□□ 0.22
RAB40C-205ENST00000539661 CD93Q9NPY3 652 aa16.42■□□□□ 0.22
RAB40C-205ENST00000539661 LHX9Q9NQ69 397 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms