RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 FMO1Q01740 532 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 ZBTB17Q13105 803 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 TMED1Q13445 227 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 ODF1Q14990 250 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 MLC1Q15049 377 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 PPA1Q15181 289 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 NSUN5P1Q3KNT7 163 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 LCTLQ6UWM7 567 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 QSOX2Q6ZRP7 698 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 ADCK2Q7Z695 626 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 MCOLN2Q8IZK6 566 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 ZNF786Q8N393 782 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 SLC25A41Q8N5S1 370 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 WDR60Q8WVS4 1066 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 RFKQ969G6 155 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 IMP4Q96G21 291 aaKnown RBP4.22□□□□□ -1.73
SDCBP-205ENST00000447267 CLPTM1LQ96KA5 538 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 C1QTNF6Q9BXI9 259 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 PACSIN1Q9BY11 444 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 OR8D2Q9GZM6 311 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 MMP28Q9H239 520 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 SERHLQ9NQF3 203 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 SIRT3Q9NTG7 399 aaPredicted RBP4.22□□□□□ -1.73
SDCBP-205ENST00000447267 MKS1Q9NXB0 559 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 PLEK2Q9NYT0 353 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 TAS2R16Q9NYV7 291 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.22□□□□□ -1.73
SDCBP-205ENST00000447267 SPATA7Q9P0W8 599 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 FETUBQ9UGM5 382 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 CRLS1Q9UJA2 301 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 MCM8Q9UJA3 840 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 MYO6Q9UM54 1294 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 HUWE1Q7Z6Z7 4374 aaKnown RBP4.22□□□□□ -1.73
SDCBP-205ENST00000447267 J3QLI3 93 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 F2RL2O00254 374 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 CCL22O00626 93 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 LIN7AO14910 233 aaPredicted RBP4.21□□□□□ -1.74
SDCBP-205ENST00000447267 TRAF3IP2O43734 574 aaPredicted RBP4.21□□□□□ -1.74
SDCBP-205ENST00000447267 SRP72O76094 671 aaKnown RBP4.21□□□□□ -1.74
SDCBP-205ENST00000447267 ADAP00813 363 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 SAGP10523 405 aaPredicted RBP4.21□□□□□ -1.74
SDCBP-205ENST00000447267 PFKFB1P16118 471 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 CHRNB2P17787 502 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 MIPP30301 263 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 SERPINB6P35237 376 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 GCKP35557 465 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 BDKRB1P46663 353 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 NEK2P51955 445 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 SUCLG1P53597 346 aaKnown RBP4.21□□□□□ -1.74
SDCBP-205ENST00000447267 POU6F2P78424 691 aaPredicted RBP4.21□□□□□ -1.74
SDCBP-205ENST00000447267 MYBPC1Q00872 1141 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 RASGEF1BQ0VAM2 473 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 FGFBP1Q14512 234 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 ACAP2Q15057 778 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 PON3Q15166 354 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 DPYSL2Q16555 572 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 DEFB134Q4QY38 66 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 CCDC92Q53HC0 331 aaPredicted RBP4.21□□□□□ -1.74
SDCBP-205ENST00000447267 ARMC3Q5W041 872 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 ZNF425Q6IV72 752 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 ACSM5Q6NUN0 579 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 ZNF549Q6P9A3 640 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 TRIM40Q6P9F5 258 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 MON1BQ7L1V2 547 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 LRRC49Q8IUZ0 686 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 PSTKQ8IV42 348 aaKnown RBP4.21□□□□□ -1.74
SDCBP-205ENST00000447267 OR4N5Q8IXE1 308 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 OR6K3Q8NGY3 331 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 SPATA22Q8NHS9 363 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 POC1BQ8TC44 478 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 BLOC1S5Q8TDH9 187 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 DOK4Q8TEW6 326 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 SCARB1Q8WTV0 552 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 SLC47A1Q96FL8 570 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 TSGA13Q96PP4 275 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 COPS8Q99627 209 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 BAG1Q99933 345 aaPredicted RBP4.21□□□□□ -1.74
SDCBP-205ENST00000447267 INPP5KQ9BT40 448 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 HDHD5Q9BXW7 423 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 MS4A7Q9GZW8 240 aaPredicted RBP4.21□□□□□ -1.74
SDCBP-205ENST00000447267 RACGAP1Q9H0H5 632 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 TRABDQ9H4I3 376 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 ZWILCHQ9H900 591 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 TMEM165Q9HC07 324 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 TEX10Q9NXF1 929 aaPredicted RBP4.21□□□□□ -1.74
SDCBP-205ENST00000447267 XPR1Q9UBH6 696 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.21□□□□□ -1.74
SDCBP-205ENST00000447267 CLDN16Q9Y5I7 305 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 IKBKGQ9Y6K9 419 aa4.21□□□□□ -1.74
SDCBP-205ENST00000447267 A0A1B0GW55 424 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 A0A1W2PR80 420 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 WDR91A4D1P6 747 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 KRTAP29-1A8MX34 341 aaPredicted RBP4.2□□□□□ -1.74
SDCBP-205ENST00000447267 KLF11O14901 512 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 STX7O15400 261 aaKnown RBP4.2□□□□□ -1.74
SDCBP-205ENST00000447267 LY6G6CO95867 125 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 GBAP04062 536 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 IFNA16P05015 189 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 CCDC159P0C7I6 412 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 DHRS4L1P0CG22 281 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms