RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 TSPAN31Q12999 210 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 DCST2Q5T1A1 773 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 SFRP4Q6FHJ7 346 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 C1orf94Q6P1W5 598 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 UHRF1Q96T88 793 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 AIFM2Q9BRQ8 373 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 ZNF350Q9GZX5 532 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 DDX31Q9H8H2 851 aaKnown RBP16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 FBXL3Q9UKT7 428 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 SLC35A3Q9Y2D2 325 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 IER3IP1Q9Y5U9 82 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 FURINP09958 794 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 UBL4AP11441 157 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 CDNFQ49AH0 187 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 GPR148Q8TDV2 347 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 SPRYD4Q8WW59 207 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 CDS1Q92903 461 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 PGAM5Q96HS1 289 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 BABAM2Q9NXR7 383 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 NAP1L6A6NFF2 107 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 PCP4L1A6NKN8 68 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 RDH16O75452 317 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 SLCO2B1O94956 709 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 GPR75O95800 540 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 TNFSF8P32971 234 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 VEGFBP49765 207 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 AIMP2Q13155 320 aaKnown RBP16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 ARL6IP1Q15041 203 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 CHRFAM7AQ494W8 412 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 LRRC37A5PQ49AS3 106 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 BCL2L15Q5TBC7 163 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 RFLNAQ6ZTI6 216 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 SLC38A5Q8WUX1 472 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 P2RY12Q9H244 342 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 RARRES3Q9UL19 164 aa16.07■□□□□ 0.16
TRAPPC11-201ENST00000334690 MMP12P39900 470 aa16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 MRPS10P82664 201 aaKnown RBP16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 TDGQ13569 410 aa16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 SLC35F2Q8IXU6 374 aa16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 ZNF417Q8TAU3 575 aa16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 PMM1Q92871 262 aa16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 ZC3H10Q96K80 434 aaKnown RBP16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 C2orf42Q9NWW7 574 aa16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 USP36Q9P275 1121 aaKnown RBP16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 N4BP2Q86UW6 1770 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 VNN2O95498 520 aa16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 LHCGRP22888 699 aa16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 PSMB5P28074 263 aa16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 PRSS3P35030 304 aa16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 Q6ZSR6 202 aa16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 BEST3Q8N1M1 668 aa16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 OR2T35Q8NGX2 323 aa16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 MACROD1Q9BQ69 325 aa16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 ZNF304Q9HCX3 659 aa16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 PSORS1C1Q9UIG5 152 aa16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 SLC7A11Q9UPY5 501 aa16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 A0A1B0GVG6 124 aa16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 RAD51DO75771 328 aa16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 MMP2P08253 660 aa16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 NUDT1P36639 197 aa16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 TP53I3Q53FA7 332 aa16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 ACSM3Q53FZ2 586 aa16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 ZNF852Q6ZMS4 543 aa16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 ZNF761Q86XN6 746 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 OR5T2Q8NGG2 359 aa16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 DNAJA3Q96EY1 480 aa16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 LMF2Q9BU23 707 aaKnown RBP16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 TAPBPO15533 448 aa16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 CD3GP09693 182 aa16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 CLUP10909 449 aa16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 F3P13726 295 aa16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 TBC1D25Q3MII6 688 aa16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 CST9Q5W186 159 aa16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 FIP1L1Q6UN15 594 aaKnown RBP16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 STOML3Q8TAV4 291 aa16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 WDR77Q9BQA1 342 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 DNMT3BQ9UBC3 853 aaKnown RBP16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 NUFIP1Q9UHK0 495 aaKnown RBP16.06■□□□□ 0.16
TRAPPC11-201ENST00000334690 USP54Q70EL1 1684 aa16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 DRD5P21918 477 aa16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 CRABP1P29762 137 aa16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 FNTBP49356 437 aa16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 MAN2A2P49641 1150 aa16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 PRKXP51817 358 aa16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 NKX2-5P52952 324 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 AGAP6Q5VW22 663 aa16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 OR13C3Q8NGS6 347 aa16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 RPL3LQ92901 407 aaKnown RBP16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 TEX37Q96LM6 180 aa16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 AGAP4Q96P64 663 aa16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 CACNG3O60359 315 aa16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 CTBSQ01459 385 aa16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 ENTPD8Q5MY95 495 aa16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 ANKRD54Q6NXT1 300 aa16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 NEDD4LQ96PU5 975 aa16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 PITX2Q99697 317 aa16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 SLC6A7Q99884 636 aa16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 NAA11Q9BSU3 229 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 BTBD2Q9BX70 525 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms