RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 PGGHGQ32M88 737 aa18.52■□□□□ 0.56
CRLF3-201ENST00000324238 CD200R1LQ6Q8B3 271 aa18.52■□□□□ 0.56
CRLF3-201ENST00000324238 RASSF6Q6ZTQ3 369 aa18.52■□□□□ 0.56
CRLF3-201ENST00000324238 IL17RCQ8NAC3 791 aa18.52■□□□□ 0.56
CRLF3-201ENST00000324238 SOSTQ9BQB4 213 aa18.52■□□□□ 0.56
CRLF3-201ENST00000324238 SLC28A3Q9HAS3 691 aa18.52■□□□□ 0.56
CRLF3-201ENST00000324238 BCL2L10Q9HD36 194 aa18.52■□□□□ 0.56
CRLF3-201ENST00000324238 RASD1Q9Y272 281 aa18.52■□□□□ 0.56
CRLF3-201ENST00000324238 CACNA1CQ13936 2221 aa18.52■□□□□ 0.56
CRLF3-201ENST00000324238 A0A0G2JPF8 293 aa18.52■□□□□ 0.56
CRLF3-201ENST00000324238 HNRNPCL2B2RXH8 293 aa18.52■□□□□ 0.56
CRLF3-201ENST00000324238 HNRNPCL3B7ZW38 293 aa18.52■□□□□ 0.56
CRLF3-201ENST00000324238 SLC31A1O15431 190 aa18.52■□□□□ 0.56
CRLF3-201ENST00000324238 SEC14L5O43304 696 aa18.52■□□□□ 0.56
CRLF3-201ENST00000324238 HNRNPCL4P0DMR1 293 aa18.52■□□□□ 0.56
CRLF3-201ENST00000324238 DSG2Q14126 1118 aa18.52■□□□□ 0.56
CRLF3-201ENST00000324238 FAM109BQ6ICB4 259 aaPredicted RBP18.52■□□□□ 0.56
CRLF3-201ENST00000324238 ABHD17CQ6PCB6 329 aa18.52■□□□□ 0.56
CRLF3-201ENST00000324238 ZCCHC10Q8TBK6 192 aa18.52■□□□□ 0.56
CRLF3-201ENST00000324238 FGF13Q92913 245 aa18.52■□□□□ 0.56
CRLF3-201ENST00000324238 DACT3Q96B18 629 aaPredicted RBP18.52■□□□□ 0.56
CRLF3-201ENST00000324238 ELP4Q96EB1 424 aa18.52■□□□□ 0.56
CRLF3-201ENST00000324238 PPP1R16AQ96I34 528 aa18.52■□□□□ 0.56
CRLF3-201ENST00000324238 ZNF624Q9P2J8 865 aaPredicted RBP18.52■□□□□ 0.56
CRLF3-201ENST00000324238 ARID1BQ8NFD5 2236 aaPredicted RBP18.52■□□□□ 0.55
CRLF3-201ENST00000324238 CACNA1IQ9P0X4 2223 aa18.52■□□□□ 0.55
CRLF3-201ENST00000324238 TNFRSF10AO00220 468 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 ZGLP1P0C6A0 271 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 CSNK2A2P19784 350 aaPredicted RBP18.51■□□□□ 0.55
CRLF3-201ENST00000324238 HLA-DMAP28067 261 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 SIM1P81133 766 aaPredicted RBP18.51■□□□□ 0.55
CRLF3-201ENST00000324238 SLC25A35Q3KQZ1 300 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 RFPL4BQ6ZWI9 263 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 CXXC5Q7LFL8 322 aaKnown RBP18.51■□□□□ 0.55
CRLF3-201ENST00000324238 GPR135Q8IZ08 494 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 POGLUT1Q8NBL1 392 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 OR7G2Q8NG99 324 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 GRPEL2Q8TAA5 225 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 ADAMTS15Q8TE58 950 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 COX14Q96I36 57 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 ABCG5Q9H222 651 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 UBQLN3Q9H347 655 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 CA5BQ9Y2D0 317 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 FABP7O15540 132 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 HCN1O60741 890 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 TRAPPC2P0DI81 140 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 TRAPPC2BP0DI82 140 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 RRAS2P62070 204 aaPredicted RBP18.51■□□□□ 0.55
CRLF3-201ENST00000324238 WDR88Q6ZMY6 472 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 HDDC3Q8N4P3 179 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 OR51L1Q8NGJ5 315 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 ZFP3Q96NJ6 502 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 ENAMQ9NRM1 1142 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 UCKL1Q9NWZ5 548 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 TAS2R7Q9NYW3 318 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 LOC105369274A0A096LPK9 316 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 A0A0A6YYJ9 748 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 ARHGEF9O43307 516 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 TBX19O60806 448 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 ASGR2P07307 311 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 CD3GP09693 182 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 ERGP11308 486 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 DRD2P14416 443 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 POU3F3P20264 500 aaPredicted RBP18.51■□□□□ 0.55
CRLF3-201ENST00000324238 NOS3P29474 1203 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 ERP29P30040 261 aaKnown RBP18.51■□□□□ 0.55
CRLF3-201ENST00000324238 UQCRC1P31930 480 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 CLDN20P56880 219 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 SRP54P61011 504 aaKnown RBP18.51■□□□□ 0.55
CRLF3-201ENST00000324238 GAB4Q2WGN9 574 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 TANGO2Q6ICL3 276 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 OR4N4Q8N0Y3 316 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 C17orf47Q8NEP4 570 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 OR52E1Q8NGJ3 308 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 OR51A7Q8NH64 312 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 ORAI1Q96D31 301 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 OTUB2Q96DC9 234 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 ALG8Q9BVK2 526 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 IL23AQ9NPF7 189 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 MRPS18AQ9NVS2 196 aaKnown RBP18.51■□□□□ 0.55
CRLF3-201ENST00000324238 ING3Q9NXR8 418 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 WSB2Q9NYS7 404 aaPredicted RBP18.51■□□□□ 0.55
CRLF3-201ENST00000324238 ZNF222Q9UK12 451 aa18.51■□□□□ 0.55
CRLF3-201ENST00000324238 PEPDP12955 493 aa18.5■□□□□ 0.55
CRLF3-201ENST00000324238 MAPK14Q16539 360 aa18.5■□□□□ 0.55
CRLF3-201ENST00000324238 TMEM31Q5JXX7 168 aa18.5■□□□□ 0.55
CRLF3-201ENST00000324238 ZNF620Q6ZNG0 422 aa18.5■□□□□ 0.55
CRLF3-201ENST00000324238 IZUMO1Q8IYV9 350 aa18.5■□□□□ 0.55
CRLF3-201ENST00000324238 ABHD1Q96SE0 405 aa18.5■□□□□ 0.55
CRLF3-201ENST00000324238 THAP7Q9BT49 309 aaPredicted RBP18.5■□□□□ 0.55
CRLF3-201ENST00000324238 NUDT15Q9NV35 164 aa18.5■□□□□ 0.55
CRLF3-201ENST00000324238 CDH10Q9Y6N8 788 aa18.5■□□□□ 0.55
CRLF3-201ENST00000324238 RNF13O43567 381 aa18.5■□□□□ 0.55
CRLF3-201ENST00000324238 CLEC3AO75596 197 aa18.5■□□□□ 0.55
CRLF3-201ENST00000324238 DRD3P35462 400 aa18.5■□□□□ 0.55
CRLF3-201ENST00000324238 IFNGR2P38484 337 aa18.5■□□□□ 0.55
CRLF3-201ENST00000324238 HTRA4P83105 476 aaPredicted RBP18.5■□□□□ 0.55
CRLF3-201ENST00000324238 MRPL28Q13084 256 aaKnown RBP18.5■□□□□ 0.55
CRLF3-201ENST00000324238 C2orf27AQ580R0 203 aa18.5■□□□□ 0.55
CRLF3-201ENST00000324238 ZC3H14Q6PJT7 736 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms