RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 PRPF19Q9UMS4 504 aaKnown RBP12.91□□□□□ -0.34
VPS25-201ENST00000253794 ANGPT4Q9Y264 503 aa12.91□□□□□ -0.34
VPS25-201ENST00000253794 DTNAQ9Y4J8 743 aa12.91□□□□□ -0.34
VPS25-201ENST00000253794 WIF1Q9Y5W5 379 aa12.91□□□□□ -0.34
VPS25-201ENST00000253794 GPC6Q9Y625 555 aaPredicted RBP12.91□□□□□ -0.34
VPS25-201ENST00000253794 KALRNO60229 2985 aa12.91□□□□□ -0.34
VPS25-201ENST00000253794 CENPVL1A0A0U1RR11 272 aa12.9□□□□□ -0.34
VPS25-201ENST00000253794 ELOVL7A1L3X0 281 aa12.9□□□□□ -0.34
VPS25-201ENST00000253794 PRORSD1PA6NEY8 169 aa12.9□□□□□ -0.34
VPS25-201ENST00000253794 C5orf58C9J3I9 102 aa12.9□□□□□ -0.34
VPS25-201ENST00000253794 KLRC4-KLRK1H3BQV0 150 aa12.9□□□□□ -0.34
VPS25-201ENST00000253794 EBAG9O00559 213 aa12.9□□□□□ -0.34
VPS25-201ENST00000253794 SCDO00767 359 aa12.9□□□□□ -0.34
VPS25-201ENST00000253794 PEX1O43933 1283 aa12.9□□□□□ -0.34
VPS25-201ENST00000253794 GCM2O75603 506 aaPredicted RBP12.9□□□□□ -0.34
VPS25-201ENST00000253794 DBIP07108 87 aaKnown RBP12.9□□□□□ -0.34
VPS25-201ENST00000253794 THBS1P07996 1170 aa12.9□□□□□ -0.34
VPS25-201ENST00000253794 HTR1EP28566 365 aa12.9□□□□□ -0.34
VPS25-201ENST00000253794 RFX3P48380 749 aa12.9□□□□□ -0.34
VPS25-201ENST00000253794 CLK3P49761 638 aaKnown RBP12.9□□□□□ -0.34
VPS25-201ENST00000253794 MXRA7P84157 204 aa12.9□□□□□ -0.34
VPS25-201ENST00000253794 FGFBP1Q14512 234 aa12.9□□□□□ -0.34
VPS25-201ENST00000253794 MAPK14Q16539 360 aa12.9□□□□□ -0.34
VPS25-201ENST00000253794 ZSWIM7Q19AV6 140 aa12.9□□□□□ -0.34
VPS25-201ENST00000253794 PLEKHN1Q494U1 663 aaPredicted RBP12.9□□□□□ -0.34
VPS25-201ENST00000253794 NADK2Q4G0N4 442 aa12.9□□□□□ -0.34
VPS25-201ENST00000253794 DNAL1Q4LDG9 190 aa12.9□□□□□ -0.34
VPS25-201ENST00000253794 BICRALQ6AI39 1079 aa12.9□□□□□ -0.34
VPS25-201ENST00000253794 OLIG3Q7RTU3 272 aa12.9□□□□□ -0.34
VPS25-201ENST00000253794 PATL1Q86TB9 770 aaKnown RBP12.9□□□□□ -0.34
VPS25-201ENST00000253794 PTRH1Q86Y79 214 aaKnown RBP12.9□□□□□ -0.34
VPS25-201ENST00000253794 CMIPQ8IY22 773 aa12.9□□□□□ -0.34
VPS25-201ENST00000253794 MICU2Q8IYU8 434 aa12.9□□□□□ -0.34
VPS25-201ENST00000253794 FAM71CQ8NEG0 241 aa12.9□□□□□ -0.34
VPS25-201ENST00000253794 ZG16BQ96DA0 208 aa12.9□□□□□ -0.34
VPS25-201ENST00000253794 CDRT15Q96T59 188 aa12.9□□□□□ -0.34
VPS25-201ENST00000253794 DOHHQ9BU89 302 aa12.9□□□□□ -0.34
VPS25-201ENST00000253794 TBL1XR1Q9BZK7 514 aa12.9□□□□□ -0.34
VPS25-201ENST00000253794 RTN4RQ9BZR6 473 aa12.9□□□□□ -0.34
VPS25-201ENST00000253794 SDHAF3Q9NRP4 125 aa12.9□□□□□ -0.34
VPS25-201ENST00000253794 KLRF1Q9NZS2 232 aa12.9□□□□□ -0.34
VPS25-201ENST00000253794 SMG1Q96Q15 3661 aaKnown RBP12.9□□□□□ -0.34
VPS25-201ENST00000253794 A0A0G2JMM0 328 aa12.89□□□□□ -0.35
VPS25-201ENST00000253794 A0A1W2PPB8 328 aa12.89□□□□□ -0.35
VPS25-201ENST00000253794 A0A1W2PRS3 328 aa12.89□□□□□ -0.35
VPS25-201ENST00000253794 SERINC4A6NH21 518 aa12.89□□□□□ -0.35
VPS25-201ENST00000253794 LRRC3CA6NJW4 275 aa12.89□□□□□ -0.35
VPS25-201ENST00000253794 KIR3DP1A8MWS1 328 aa12.89□□□□□ -0.35
VPS25-201ENST00000253794 SNPHO15079 494 aa12.89□□□□□ -0.35
VPS25-201ENST00000253794 GLSO94925 669 aaPredicted RBP12.89□□□□□ -0.35
VPS25-201ENST00000253794 NID1P14543 1247 aa12.89□□□□□ -0.35
VPS25-201ENST00000253794 ELAVL4P26378 380 aaKnown RBP12.89□□□□□ -0.35
VPS25-201ENST00000253794 RASSF2P50749 326 aa12.89□□□□□ -0.35
VPS25-201ENST00000253794 GPR68Q15743 365 aa12.89□□□□□ -0.35
VPS25-201ENST00000253794 RPS26P11Q5JNZ5 115 aaPredicted RBP12.89□□□□□ -0.35
VPS25-201ENST00000253794 PDZK1Q5T2W1 519 aa12.89□□□□□ -0.35
VPS25-201ENST00000253794 PRAMEF20Q5VT98 475 aa12.89□□□□□ -0.35
VPS25-201ENST00000253794 RNF220Q5VTB9 566 aa12.89□□□□□ -0.35
VPS25-201ENST00000253794 PACS2Q86VP3 889 aa12.89□□□□□ -0.35
VPS25-201ENST00000253794 KRT73Q86Y46 540 aa12.89□□□□□ -0.35
VPS25-201ENST00000253794 TNIP2Q8NFZ5 429 aa12.89□□□□□ -0.35
VPS25-201ENST00000253794 SLC35B4Q969S0 331 aa12.89□□□□□ -0.35
VPS25-201ENST00000253794 ZNF597Q96LX8 424 aa12.89□□□□□ -0.35
VPS25-201ENST00000253794 ZNF607Q96SK3 696 aa12.89□□□□□ -0.35
VPS25-201ENST00000253794 BTBD10Q9BSF8 475 aa12.89□□□□□ -0.35
VPS25-201ENST00000253794 GALNT9Q9HCQ5 603 aa12.89□□□□□ -0.35
VPS25-201ENST00000253794 KLHL1Q9NR64 748 aa12.89□□□□□ -0.35
VPS25-201ENST00000253794 PRDM4Q9UKN5 801 aa12.89□□□□□ -0.35
VPS25-201ENST00000253794 USP22Q9UPT9 525 aa12.89□□□□□ -0.35
VPS25-201ENST00000253794 IFT52Q9Y366 437 aa12.89□□□□□ -0.35
VPS25-201ENST00000253794 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.89□□□□□ -0.35
VPS25-201ENST00000253794 CFAP46Q8IYW2 2715 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 CHD6Q8TD26 2715 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 NPIPA5A0A0B4J1W7 369 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 NPIPA7E9PJI5 369 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 H3BNH8 94 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 PDE9AO76083 593 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 ANGPTL1O95841 491 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 PABPC4LP0CB38 370 aaKnown RBP12.88□□□□□ -0.35
VPS25-201ENST00000253794 NPIPA8P0DM63 369 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 HPGDP15428 266 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 MSX1P28360 303 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 PRKAR1BP31321 381 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 DNASE1L1P49184 302 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 MEOX1P50221 254 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 CRYBA2P53672 197 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 KCNJ2P63252 427 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 PLAURQ03405 335 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 C17orf67Q0P5P2 114 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 CEACAM7Q14002 265 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 ELOAQ14241 798 aaKnown RBP12.88□□□□□ -0.35
VPS25-201ENST00000253794 CD226Q15762 336 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 LIN52Q52LA3 116 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 TIGD3Q6B0B8 471 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 DHRS4L2Q6PKH6 230 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 MARCH3Q86UD3 253 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 GRAMD2AQ8IUY3 354 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 PEX5LQ8IYB4 626 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 FADS6Q8N9I5 356 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 WDSUB1Q8N9V3 476 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms