RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 GlsD3Z7P3 674 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 TspearJ3S6Y1 670 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Ccrl2O35457 360 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Irs3O54718 495 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Rhox6O70238 227 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Grap2O89100 322 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Syt4P40749 425 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Kcnk9Q3LS21 402 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 NnatQ61979 81 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Tas2r104Q7M723 302 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 MkxQ8BIA3 353 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Ces2eQ8BK48 559 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Olfr1312Q8VF10 317 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Isoc1Q91V64 297 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Dach2Q925Q8 634 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Sucnr1Q99MT6 317 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Erv3Q9DAX3 200 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Znf207Q9JMD0 495 aaKnown RBP13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Trim3Q9R1R2 744 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 PtgfrnQ9WV91 879 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Tcf7l1Q9Z1J1 584 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Cep295Q8BQ48 2412 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Zfp937A2ANU7 503 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Gtpbp1O08582 668 aaKnown RBP13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Asna1O54984 348 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Serpine1P22777 402 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Ucp3P56501 308 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 EsrrgP62509 458 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Pde12Q3TIU4 608 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Ankrd42Q3V096 527 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Lin28bQ45KJ6 247 aaKnown RBP13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Frg2f1Q6P3A2 227 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Kmt5cQ6Q783 468 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Zik1Q80YP6 463 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Rab15Q8K386 212 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Epm2aip1Q8VEH5 606 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Olfr229Q8VFN5 307 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Olfr561Q8VGZ6 314 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Tmem63aQ91YT8 804 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Tram2Q924Z5 370 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Abhd17aQ99JW1 310 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Rita1Q9D1H0 253 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 TrirQ9D735 173 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Cib4Q9D9N5 185 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Mfsd1Q9DC37 464 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Cd302Q9DCG2 228 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Aph1cQ9DCZ9 258 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Sacm1lQ9EP69 587 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Minpp1Q9Z2L6 481 aa13.79□□□□□ -0.2
Nup88-202ENSMUST00000108530 Igkv6-32A0A140T8N9 115 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 Vmn2r109K7N747 858 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 PlaaP27612 794 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 Hsd17b3P70385 305 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 AhrrQ3U1U7 701 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 IspdQ5RJG7 447 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 Laptm4aQ60961 233 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 MuskQ61006 868 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 Ubash3bQ8BGG7 638 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 Muc20Q8BUE7 656 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 EndovQ8C9A2 338 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 EloaQ8CB77 773 aaKnown RBP13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 Ttc23Q8CHY7 488 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 Tmem150bQ8R218 238 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 Ogfrl1Q8VE52 464 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 Olfr474Q8VFC9 310 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 Olfr781Q8VFZ8 311 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 Scpep1Q920A5 452 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 Stpg4Q9DAG5 247 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 Ptges3Q9R0Q7 160 aaKnown RBP13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 VcanQ62059 3357 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 FcmrA1KXC4 422 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 Sult3a2G5E904 293 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 Rhox2hK7N6P1 191 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 Hmox2O70252 315 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 Nsg2P47759 171 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 Slc16a3P57787 470 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 Scgb1a1Q06318 96 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 Gm10696Q3UTC4 357 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 WhammQ571B6 793 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 Dtx4Q6PDK8 616 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 Syt16Q7TN83 639 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 Oog2Q7TPX8 476 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 Bnc2Q8BMQ3 1127 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 Fgd2Q8BY35 655 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 Dzank1Q8C008 778 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 Pycr1Q922W5 309 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 Taar1Q923Y8 332 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 Tomm34Q9CYG7 309 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 Spaca1Q9DA48 305 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 Tnfrsf22Q9ER62 198 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 Exo1Q9QZ11 837 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 ReckQ9Z0J1 971 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 Pmm2Q9Z2M7 242 aa13.78□□□□□ -0.2
Nup88-202ENSMUST00000108530 Btbd35f16A0A087WSN2 498 aa13.77□□□□□ -0.21
Nup88-202ENSMUST00000108530 Gm14085A2AWR5 660 aa13.77□□□□□ -0.21
Nup88-202ENSMUST00000108530 CK137956B1AYM9 596 aa13.77□□□□□ -0.21
Nup88-202ENSMUST00000108530 Gm10608E9PZ13 166 aa13.77□□□□□ -0.21
Nup88-202ENSMUST00000108530 Slc16a5G5E8K6 468 aa13.77□□□□□ -0.21
Nup88-202ENSMUST00000108530 Prdx4O08807 274 aaKnown RBP13.77□□□□□ -0.21
Nup88-202ENSMUST00000108530 Slc16a7O70451 484 aa13.77□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 72.9 ms