RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 CCDC93Q567U6 631 aa21.36■■□□□ 1.01
COLCA2-206ENST00000638573 CCDC88AQ3V6T2 1871 aa21.35■■□□□ 1.01
COLCA2-206ENST00000638573 FAM9BQ8IZU0 186 aa21.35■■□□□ 1.01
COLCA2-206ENST00000638573 ARFGEF2Q9Y6D5 1785 aa21.35■■□□□ 1.01
COLCA2-206ENST00000638573 DDNO94850 711 aaPredicted RBP21.34■■□□□ 1.01
COLCA2-206ENST00000638573 HCLS1P14317 486 aaPredicted RBP21.34■■□□□ 1.01
COLCA2-206ENST00000638573 C16orf71Q8IYS4 520 aaPredicted RBP21.34■■□□□ 1.01
COLCA2-206ENST00000638573 SNED1Q8TER0 1413 aa21.34■■□□□ 1.01
COLCA2-206ENST00000638573 IBTKQ9P2D0 1353 aaPredicted RBP21.34■■□□□ 1.01
COLCA2-206ENST00000638573 CEP350Q5VT06 3117 aa21.33■■□□□ 1.01
COLCA2-206ENST00000638573 ZC3H4Q9UPT8 1303 aaKnown RBP21.33■■□□□ 1.01
COLCA2-206ENST00000638573 NLRP10Q86W26 655 aa21.33■■□□□ 1.01
COLCA2-206ENST00000638573 C8orf58Q8NAV2 365 aa21.33■■□□□ 1.01
COLCA2-206ENST00000638573 RBM46Q8TBY0 533 aaKnown RBP21.33■■□□□ 1.01
COLCA2-206ENST00000638573 UTP14AQ9BVJ6 771 aaKnown RBP21.33■■□□□ 1.01
COLCA2-206ENST00000638573 FKBP4Q02790 459 aaKnown RBP eCLIP21.32■■□□□ 1
COLCA2-206ENST00000638573 RPGRQ92834 1020 aaKnown RBP21.32■■□□□ 1
COLCA2-206ENST00000638573 ZNF541Q9H0D2 1346 aa21.31■■□□□ 1
COLCA2-206ENST00000638573 COL4A5P29400 1685 aa21.31■■□□□ 1
COLCA2-206ENST00000638573 ATP5J2-PTCD1G3V325 749 aa21.31■■□□□ 1
COLCA2-206ENST00000638573 POTEIP0CG38 1075 aa21.31■■□□□ 1
COLCA2-206ENST00000638573 POTEJP0CG39 1038 aa21.31■■□□□ 1
COLCA2-206ENST00000638573 TCIRG1Q13488 830 aa21.31■■□□□ 1
COLCA2-206ENST00000638573 PARP10Q53GL7 1025 aa21.31■■□□□ 1
COLCA2-206ENST00000638573 PPP1R42Q7Z4L9 355 aa21.31■■□□□ 1
COLCA2-206ENST00000638573 TSPYL6Q8N831 410 aa21.31■■□□□ 1
COLCA2-206ENST00000638573 TSR2Q969E8 191 aaKnown RBP21.31■■□□□ 1
COLCA2-206ENST00000638573 IFT57Q9NWB7 429 aa21.31■■□□□ 1
COLCA2-206ENST00000638573 RIC1Q4ADV7 1423 aa21.3■■□□□ 1
COLCA2-206ENST00000638573 SOGA3Q5TF21 947 aa21.3■■□□□ 1
COLCA2-206ENST00000638573 PHAXQ9H814 394 aaKnown RBP21.3■■□□□ 1
COLCA2-206ENST00000638573 VEGFAP15692 232 aaPredicted RBP21.29■■□□□ 1
COLCA2-206ENST00000638573 ALDH1B1P30837 517 aa21.29■■□□□ 1
COLCA2-206ENST00000638573 HOXA10P31260 410 aaPredicted RBP21.29■■□□□ 1
COLCA2-206ENST00000638573 HOXB7P09629 217 aa21.28■■□□□ 1
COLCA2-206ENST00000638573 RTL5Q5HYW3 569 aaPredicted RBP21.28■■□□□ 1
COLCA2-206ENST00000638573 MIER1Q8N108 512 aa21.28■■□□□ 1
COLCA2-206ENST00000638573 DBF4Q9UBU7 674 aaPredicted RBP21.28■■□□□ 1
COLCA2-206ENST00000638573 TRMT112Q9UI30 125 aaKnown RBP21.28■■□□□ 1
COLCA2-206ENST00000638573 PPEF1O14829 653 aaPredicted RBP21.27■■□□□ 1
COLCA2-206ENST00000638573 GNAI1P63096 354 aa21.27■■□□□ 1
COLCA2-206ENST00000638573 PLBD2Q8NHP8 589 aa21.27■■□□□ 1
COLCA2-206ENST00000638573 SALL2Q9Y467 1007 aaPredicted RBP21.27■■□□□ 1
COLCA2-206ENST00000638573 ABCC4O15439 1325 aa21.27■□□□□ 0.99
COLCA2-206ENST00000638573 COL4A1P02462 1669 aa21.26■□□□□ 0.99
COLCA2-206ENST00000638573 IARSP41252 1262 aaKnown RBP21.26■□□□□ 0.99
COLCA2-206ENST00000638573 CALD1Q05682 793 aaKnown RBP21.26■□□□□ 0.99
COLCA2-206ENST00000638573 SLC10A5Q5PT55 438 aa21.26■□□□□ 0.99
COLCA2-206ENST00000638573 DPY19L2Q6NUT2 758 aa21.26■□□□□ 0.99
COLCA2-206ENST00000638573 ANKRD13DQ6ZTN6 518 aa21.26■□□□□ 0.99
COLCA2-206ENST00000638573 RBM17Q96I25 401 aaKnown RBP21.26■□□□□ 0.99
COLCA2-206ENST00000638573 NLRP3Q96P20 1036 aa21.26■□□□□ 0.99
COLCA2-206ENST00000638573 CRAMP1Q96RY5 1269 aa21.26■□□□□ 0.99
COLCA2-206ENST00000638573 APLP1P51693 650 aa21.25■□□□□ 0.99
COLCA2-206ENST00000638573 RTKN2Q8IZC4 609 aa21.25■□□□□ 0.99
COLCA2-206ENST00000638573 FAM89AQ96GI7 184 aa21.25■□□□□ 0.99
COLCA2-206ENST00000638573 WDR90Q96KV7 1748 aa21.25■□□□□ 0.99
COLCA2-206ENST00000638573 ISCA1Q9BUE6 129 aa21.25■□□□□ 0.99
COLCA2-206ENST00000638573 ANKRD36CQ5JPF3 1778 aa21.25■□□□□ 0.99
COLCA2-206ENST00000638573 DICER1Q9UPY3 1922 aaKnown RBP21.24■□□□□ 0.99
COLCA2-206ENST00000638573 FSTL1Q12841 308 aa21.24■□□□□ 0.99
COLCA2-206ENST00000638573 HSP90AB3PQ58FF7 597 aa21.24■□□□□ 0.99
COLCA2-206ENST00000638573 DNAJC5GQ8N7S2 189 aa21.24■□□□□ 0.99
COLCA2-206ENST00000638573 JARID2Q92833 1246 aaPredicted RBP21.24■□□□□ 0.99
COLCA2-206ENST00000638573 WWC1Q8IX03 1113 aa21.23■□□□□ 0.99
COLCA2-206ENST00000638573 SMC1BQ8NDV3 1235 aa21.23■□□□□ 0.99
COLCA2-206ENST00000638573 HYPKQ9NX55 129 aa21.23■□□□□ 0.99
COLCA2-206ENST00000638573 SH3TC1Q8TE82 1336 aa21.23■□□□□ 0.99
COLCA2-206ENST00000638573 LAMB2P55268 1798 aa21.21■□□□□ 0.99
COLCA2-206ENST00000638573 CCDC27Q2M243 656 aa21.21■□□□□ 0.99
COLCA2-206ENST00000638573 NCBP3Q53F19 620 aaKnown RBP21.21■□□□□ 0.99
COLCA2-206ENST00000638573 PSMD1Q99460 953 aa21.21■□□□□ 0.99
COLCA2-206ENST00000638573 FZD9O00144 591 aa21.2■□□□□ 0.98
COLCA2-206ENST00000638573 RIC3Q7Z5B4 369 aa21.2■□□□□ 0.98
COLCA2-206ENST00000638573 MYD88Q99836 296 aa21.2■□□□□ 0.98
COLCA2-206ENST00000638573 RNF123Q5XPI4 1314 aa21.2■□□□□ 0.98
COLCA2-206ENST00000638573 AOC3Q16853 763 aa21.19■□□□□ 0.98
COLCA2-206ENST00000638573 ATP6V0A2Q9Y487 856 aa21.19■□□□□ 0.98
COLCA2-206ENST00000638573 G2E3Q7L622 706 aa21.18■□□□□ 0.98
COLCA2-206ENST00000638573 L3MBTL3Q96JM7 780 aaPredicted RBP21.18■□□□□ 0.98
COLCA2-206ENST00000638573 TAF1DQ9H5J8 278 aaPredicted RBP21.18■□□□□ 0.98
COLCA2-206ENST00000638573 DDX60Q8IY21 1712 aaKnown RBP21.18■□□□□ 0.98
COLCA2-206ENST00000638573 TAF1P21675 1872 aa21.18■□□□□ 0.98
COLCA2-206ENST00000638573 GOLGA2Q08379 1002 aa21.17■□□□□ 0.98
COLCA2-206ENST00000638573 LARGE2Q8N3Y3 721 aa21.17■□□□□ 0.98
COLCA2-206ENST00000638573 CELF1Q92879 486 aaKnown RBP21.17■□□□□ 0.98
COLCA2-206ENST00000638573 SPINK5Q9NQ38 1064 aaPredicted RBP21.17■□□□□ 0.98
COLCA2-206ENST00000638573 GJA3Q9Y6H8 435 aa21.17■□□□□ 0.98
COLCA2-206ENST00000638573 GRAPQ13588 217 aa21.16■□□□□ 0.98
COLCA2-206ENST00000638573 CC2D2BQ6DHV5 1058 aa21.16■□□□□ 0.98
COLCA2-206ENST00000638573 GRAPLQ8TC17 118 aaPredicted RBP21.16■□□□□ 0.98
COLCA2-206ENST00000638573 IRS4O14654 1257 aaPredicted RBP21.15■□□□□ 0.98
COLCA2-206ENST00000638573 PPIP5K2O43314 1243 aa21.15■□□□□ 0.98
COLCA2-206ENST00000638573 EAPPQ56P03 285 aaPredicted RBP21.15■□□□□ 0.98
COLCA2-206ENST00000638573 DDX46Q7L014 1031 aaKnown RBP21.15■□□□□ 0.98
COLCA2-206ENST00000638573 FANCIQ9NVI1 1328 aa21.14■□□□□ 0.97
COLCA2-206ENST00000638573 CCDC30Q5VVM6 783 aa21.14■□□□□ 0.97
COLCA2-206ENST00000638573 JDP2Q8WYK2 163 aa21.14■□□□□ 0.97
COLCA2-206ENST00000638573 CCDC85AQ96PX6 553 aaPredicted RBP21.14■□□□□ 0.97
COLCA2-206ENST00000638573 MAP3K2Q9Y2U5 619 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms