RNA–Protein interactions for RNA: ENST00000636337.1

SPTAN1-231, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5

Gene SPTAN1, Length 100 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-231	ENST00000636337	SZT2	Q5T011	3432 aa		13.44	□□□□□ -0.26
SPTAN1-231	ENST00000636337	A1BG	P04217	495 aa		13.43	□□□□□ -0.26
SPTAN1-231	ENST00000636337	PKN2	Q16513	984 aa	Known RBP	13.43	□□□□□ -0.26
SPTAN1-231	ENST00000636337	TPTE2	Q6XPS3	522 aa		13.43	□□□□□ -0.26
SPTAN1-231	ENST00000636337	ZNF496	Q96IT1	587 aa	Predicted RBP	13.43	□□□□□ -0.26
SPTAN1-231	ENST00000636337	HEG1	Q9ULI3	1381 aa		13.43	□□□□□ -0.26
SPTAN1-231	ENST00000636337	FAM177B	A6PVY3	158 aa		13.42	□□□□□ -0.26
SPTAN1-231	ENST00000636337	GMPS	P49915	693 aa	Predicted RBP	13.42	□□□□□ -0.26
SPTAN1-231	ENST00000636337	ZNF157	P51786	506 aa	Predicted RBP	13.42	□□□□□ -0.26
SPTAN1-231	ENST00000636337	CC2D2B	Q6DHV5	1058 aa		13.42	□□□□□ -0.26
SPTAN1-231	ENST00000636337	DLK2	Q6UY11	383 aa		13.42	□□□□□ -0.26
SPTAN1-231	ENST00000636337	USP48	Q86UV5	1035 aa		13.42	□□□□□ -0.26
SPTAN1-231	ENST00000636337	ZC3H15	Q8WU90	426 aa	Known RBP	13.42	□□□□□ -0.26
SPTAN1-231	ENST00000636337	CCDC102A	Q96A19	550 aa		13.42	□□□□□ -0.26
SPTAN1-231	ENST00000636337	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.42	□□□□□ -0.26
SPTAN1-231	ENST00000636337	HIRA	P54198	1017 aa	Predicted RBP	13.41	□□□□□ -0.26
SPTAN1-231	ENST00000636337	CSRNP1	Q96S65	589 aa		13.41	□□□□□ -0.26
SPTAN1-231	ENST00000636337	HDAC9	Q9UKV0	1011 aa		13.41	□□□□□ -0.26
SPTAN1-231	ENST00000636337	NPC1L1	Q9UHC9	1359 aa		13.41	□□□□□ -0.26
SPTAN1-231	ENST00000636337	PPIP5K2	O43314	1243 aa		13.4	□□□□□ -0.26
SPTAN1-231	ENST00000636337	CXCL9	Q07325	125 aa		13.4	□□□□□ -0.26
SPTAN1-231	ENST00000636337	CLEC4G	Q6UXB4	293 aa		13.4	□□□□□ -0.26
SPTAN1-231	ENST00000636337	SLC51A	Q86UW1	340 aa		13.4	□□□□□ -0.26
SPTAN1-231	ENST00000636337	TRPM4	Q8TD43	1214 aa		13.4	□□□□□ -0.26
SPTAN1-231	ENST00000636337	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
SPTAN1-231	ENST00000636337	ZNF652	Q9Y2D9	606 aa		13.4	□□□□□ -0.26
SPTAN1-231	ENST00000636337		A0A0C4DFX4	3053 aa		13.39	□□□□□ -0.27
SPTAN1-231	ENST00000636337	PIP4K2A	P48426	406 aa	Predicted RBP	13.39	□□□□□ -0.27
SPTAN1-231	ENST00000636337	AOC3	Q16853	763 aa		13.39	□□□□□ -0.27
SPTAN1-231	ENST00000636337	GBA2	Q9HCG7	927 aa	Predicted RBP	13.39	□□□□□ -0.27
SPTAN1-231	ENST00000636337	TCERG1	O14776	1098 aa	Known RBP	13.38	□□□□□ -0.27
SPTAN1-231	ENST00000636337	SLC10A3	P09131	477 aa		13.38	□□□□□ -0.27
SPTAN1-231	ENST00000636337	GTF2E1	P29083	439 aa	Predicted RBP	13.38	□□□□□ -0.27
SPTAN1-231	ENST00000636337	CRY2	Q49AN0	593 aa		13.38	□□□□□ -0.27
SPTAN1-231	ENST00000636337	GRIPAP1	Q4V328	841 aa		13.38	□□□□□ -0.27
SPTAN1-231	ENST00000636337	ZNF790	Q6PG37	636 aa		13.38	□□□□□ -0.27
SPTAN1-231	ENST00000636337	C2orf69	Q8N8R5	385 aa		13.38	□□□□□ -0.27
SPTAN1-231	ENST00000636337	BCL2L13	Q9BXK5	485 aa		13.38	□□□□□ -0.27
SPTAN1-231	ENST00000636337	IL13	P35225	146 aa		13.37	□□□□□ -0.27
SPTAN1-231	ENST00000636337	MTHFSD	Q2M296	383 aa	Known RBP	13.37	□□□□□ -0.27
SPTAN1-231	ENST00000636337	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.37	□□□□□ -0.27
SPTAN1-231	ENST00000636337	ZNRF3	Q9ULT6	936 aa		13.37	□□□□□ -0.27
SPTAN1-231	ENST00000636337	CDHR2	Q9BYE9	1310 aa		13.37	□□□□□ -0.27
SPTAN1-231	ENST00000636337	CENPF	P49454	3210 aa		13.36	□□□□□ -0.27
SPTAN1-231	ENST00000636337	ABCC12	Q96J65	1359 aa		13.36	□□□□□ -0.27
SPTAN1-231	ENST00000636337	CUL9	Q8IWT3	2517 aa		13.36	□□□□□ -0.27
SPTAN1-231	ENST00000636337	SHTN1	A0MZ66	631 aa		13.36	□□□□□ -0.27
SPTAN1-231	ENST00000636337	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.36	□□□□□ -0.27
SPTAN1-231	ENST00000636337	RPGR	Q92834	1020 aa	Known RBP	13.36	□□□□□ -0.27
SPTAN1-231	ENST00000636337	FMNL2	Q96PY5	1086 aa		13.36	□□□□□ -0.27
SPTAN1-231	ENST00000636337	COLQ	Q9Y215	455 aa	Predicted RBP	13.36	□□□□□ -0.27
SPTAN1-231	ENST00000636337	HTT	P42858	3142 aa		13.36	□□□□□ -0.27
SPTAN1-231	ENST00000636337	TRIOBP	Q9H2D6	2365 aa		13.36	□□□□□ -0.27
SPTAN1-231	ENST00000636337	BRCA2	P51587	3418 aa		13.35	□□□□□ -0.27
SPTAN1-231	ENST00000636337	PPEF1	O14829	653 aa	Predicted RBP	13.35	□□□□□ -0.27
SPTAN1-231	ENST00000636337	KRT26	Q7Z3Y9	468 aa		13.35	□□□□□ -0.27
SPTAN1-231	ENST00000636337	SLC17A8	Q8NDX2	589 aa		13.35	□□□□□ -0.27
SPTAN1-231	ENST00000636337	CNOT7	Q9UIV1	285 aa	Known RBP	13.35	□□□□□ -0.27
SPTAN1-231	ENST00000636337	ADM5	C9JUS6	153 aa		13.34	□□□□□ -0.27
SPTAN1-231	ENST00000636337		H7C1D1	291 aa		13.34	□□□□□ -0.27
SPTAN1-231	ENST00000636337	RAD17	O75943	681 aa		13.34	□□□□□ -0.27
SPTAN1-231	ENST00000636337	TBC1D8	O95759	1140 aa		13.34	□□□□□ -0.27
SPTAN1-231	ENST00000636337	HMOX1	P09601	288 aa		13.34	□□□□□ -0.27
SPTAN1-231	ENST00000636337	TEF	Q10587	303 aa		13.34	□□□□□ -0.27
SPTAN1-231	ENST00000636337	NUTM1	Q86Y26	1132 aa		13.34	□□□□□ -0.27
SPTAN1-231	ENST00000636337	REM2	Q8IYK8	340 aa	Predicted RBP	13.34	□□□□□ -0.27
SPTAN1-231	ENST00000636337	POLR2A	P24928	1970 aa	Known RBP	13.33	□□□□□ -0.28
SPTAN1-231	ENST00000636337	POTEF	A5A3E0	1075 aa		13.33	□□□□□ -0.28
SPTAN1-231	ENST00000636337	HOXA10	P31260	410 aa	Predicted RBP	13.33	□□□□□ -0.28
SPTAN1-231	ENST00000636337	MICALL2	Q8IY33	904 aa		13.33	□□□□□ -0.28
SPTAN1-231	ENST00000636337	SIPA1L3	O60292	1781 aa	Predicted RBP	13.32	□□□□□ -0.28
SPTAN1-231	ENST00000636337	TNIP1	Q15025	636 aa		13.32	□□□□□ -0.28
SPTAN1-231	ENST00000636337	SAMD7	Q7Z3H4	446 aa		13.32	□□□□□ -0.28
SPTAN1-231	ENST00000636337	RASAL3	Q86YV0	1011 aa		13.32	□□□□□ -0.28
SPTAN1-231	ENST00000636337	VPS33B	Q9H267	617 aa		13.32	□□□□□ -0.28
SPTAN1-231	ENST00000636337	USP16	Q9Y5T5	823 aa		13.32	□□□□□ -0.28
SPTAN1-231	ENST00000636337	KIF7	Q2M1P5	1343 aa		13.32	□□□□□ -0.28
SPTAN1-231	ENST00000636337	RIC1	Q4ADV7	1423 aa		13.31	□□□□□ -0.28
SPTAN1-231	ENST00000636337	COL6A3	P12111	3177 aa		13.31	□□□□□ -0.28
SPTAN1-231	ENST00000636337	HLF	Q16534	295 aa		13.31	□□□□□ -0.28
SPTAN1-231	ENST00000636337	DCPS	Q96C86	337 aa	Known RBP	13.31	□□□□□ -0.28
SPTAN1-231	ENST00000636337	RBM17	Q96I25	401 aa	Known RBP	13.31	□□□□□ -0.28
SPTAN1-231	ENST00000636337	TMX4	Q9H1E5	349 aa	Predicted RBP	13.31	□□□□□ -0.28
SPTAN1-231	ENST00000636337	CEP290	O15078	2479 aa		13.3	□□□□□ -0.28
SPTAN1-231	ENST00000636337	GPR25	O00155	361 aa		13.3	□□□□□ -0.28
SPTAN1-231	ENST00000636337	RGL2	O15211	777 aa		13.3	□□□□□ -0.28
SPTAN1-231	ENST00000636337	KCNQ3	O43525	872 aa		13.3	□□□□□ -0.28
SPTAN1-231	ENST00000636337	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.3	□□□□□ -0.28
SPTAN1-231	ENST00000636337	MORC1	Q86VD1	984 aa		13.3	□□□□□ -0.28
SPTAN1-231	ENST00000636337	SUPT20H	Q8NEM7	779 aa		13.3	□□□□□ -0.28
SPTAN1-231	ENST00000636337	CRAMP1	Q96RY5	1269 aa		13.3	□□□□□ -0.28
SPTAN1-231	ENST00000636337	POLR3GL	Q9BT43	218 aa		13.3	□□□□□ -0.28
SPTAN1-231	ENST00000636337	NYX	Q9GZU5	481 aa		13.3	□□□□□ -0.28
SPTAN1-231	ENST00000636337	PAPPA2	Q9BXP8	1791 aa		13.3	□□□□□ -0.28
SPTAN1-231	ENST00000636337	KIAA0100	Q14667	2235 aa	Known RBP	13.29	□□□□□ -0.28
SPTAN1-231	ENST00000636337	PRAMEF22	A3QJZ6	481 aa		13.29	□□□□□ -0.28
SPTAN1-231	ENST00000636337	EGFR	P00533	1210 aa		13.29	□□□□□ -0.28
SPTAN1-231	ENST00000636337	IL17RE	Q8NFR9	667 aa		13.29	□□□□□ -0.28
SPTAN1-231	ENST00000636337	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.29	□□□□□ -0.28
SPTAN1-231	ENST00000636337	ATP6V0A2	Q9Y487	856 aa		13.29	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 44 ms