RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 TXLNBQ8N3L3 684 aa11.47□□□□□ -0.57
TNFAIP3-210ENST00000620204 LRRN4CLQ8ND94 238 aa11.47□□□□□ -0.57
TNFAIP3-210ENST00000620204 FUCA2Q9BTY2 467 aa11.47□□□□□ -0.57
TNFAIP3-210ENST00000620204 PNMA6EA0A0J9YXQ4 647 aa11.47□□□□□ -0.57
TNFAIP3-210ENST00000620204 AK7Q96M32 723 aa11.47□□□□□ -0.57
TNFAIP3-210ENST00000620204 LOC102724159A0A0B4J2E5 919 aa11.46□□□□□ -0.57
TNFAIP3-210ENST00000620204 BIN1O00499 593 aa11.46□□□□□ -0.57
TNFAIP3-210ENST00000620204 OAS2P29728 719 aaKnown RBP11.46□□□□□ -0.57
TNFAIP3-210ENST00000620204 PWP2Q15269 919 aaKnown RBP11.46□□□□□ -0.57
TNFAIP3-210ENST00000620204 LEKR1Q6ZMV7 388 aa11.46□□□□□ -0.57
TNFAIP3-210ENST00000620204 COG3Q96JB2 828 aa11.46□□□□□ -0.57
TNFAIP3-210ENST00000620204 CCDC73Q6ZRK6 1079 aa11.46□□□□□ -0.57
TNFAIP3-210ENST00000620204 SMARCE1Q969G3 411 aa11.46□□□□□ -0.57
TNFAIP3-210ENST00000620204 ZNF446Q9NWS9 450 aa11.46□□□□□ -0.57
TNFAIP3-210ENST00000620204 CCDC61Q9Y6R9 512 aa11.46□□□□□ -0.57
TNFAIP3-210ENST00000620204 KINO60870 393 aaKnown RBP11.46□□□□□ -0.58
TNFAIP3-210ENST00000620204 RAB11FIP3O75154 756 aa11.46□□□□□ -0.58
TNFAIP3-210ENST00000620204 SFPQP23246 707 aaKnown RBP eCLIP11.46□□□□□ -0.58
TNFAIP3-210ENST00000620204 SULT6B1Q6IMI4 303 aa11.46□□□□□ -0.58
TNFAIP3-210ENST00000620204 DDX19AQ9NUU7 478 aaKnown RBP11.46□□□□□ -0.58
TNFAIP3-210ENST00000620204 MYO1CO00159 1063 aa11.45□□□□□ -0.58
TNFAIP3-210ENST00000620204 MCM6Q14566 821 aa11.45□□□□□ -0.58
TNFAIP3-210ENST00000620204 AOPEPQ8N6M6 819 aa11.45□□□□□ -0.58
TNFAIP3-210ENST00000620204 TMEM87AQ8NBN3 555 aa11.45□□□□□ -0.58
TNFAIP3-210ENST00000620204 CARD6Q9BX69 1037 aa11.45□□□□□ -0.58
TNFAIP3-210ENST00000620204 SCAND2PQ9GZW5 306 aaPredicted RBP11.45□□□□□ -0.58
TNFAIP3-210ENST00000620204 PHACTR2O75167 634 aa11.45□□□□□ -0.58
TNFAIP3-210ENST00000620204 HSPA4P34932 840 aa11.45□□□□□ -0.58
TNFAIP3-210ENST00000620204 CNTROBQ8N137 903 aa11.45□□□□□ -0.58
TNFAIP3-210ENST00000620204 TSPYL4Q9UJ04 414 aa11.45□□□□□ -0.58
TNFAIP3-210ENST00000620204 RTL1A6NKG5 1358 aa11.45□□□□□ -0.58
TNFAIP3-210ENST00000620204 RPAP1Q9BWH6 1393 aaPredicted RBP11.45□□□□□ -0.58
TNFAIP3-210ENST00000620204 AGLP35573 1532 aa11.45□□□□□ -0.58
TNFAIP3-210ENST00000620204 RGS12O14924 1447 aa11.45□□□□□ -0.58
TNFAIP3-210ENST00000620204 ADCK5Q3MIX3 580 aa11.45□□□□□ -0.58
TNFAIP3-210ENST00000620204 PTPN21Q16825 1174 aa11.44□□□□□ -0.58
TNFAIP3-210ENST00000620204 POLKQ9UBT6 870 aa11.44□□□□□ -0.58
TNFAIP3-210ENST00000620204 SF3A1Q15459 793 aaKnown RBP11.44□□□□□ -0.58
TNFAIP3-210ENST00000620204 E2F4Q16254 413 aa11.44□□□□□ -0.58
TNFAIP3-210ENST00000620204 NOM1Q5C9Z4 860 aaKnown RBP11.44□□□□□ -0.58
TNFAIP3-210ENST00000620204 RNF20Q5VTR2 975 aa11.44□□□□□ -0.58
TNFAIP3-210ENST00000620204 SECISBP2LQ93073 1101 aaKnown RBP11.44□□□□□ -0.58
TNFAIP3-210ENST00000620204 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.44□□□□□ -0.58
TNFAIP3-210ENST00000620204 LCMT1Q9UIC8 334 aa11.44□□□□□ -0.58
TNFAIP3-210ENST00000620204 PDCP20941 246 aa11.44□□□□□ -0.58
TNFAIP3-210ENST00000620204 ME1P48163 572 aa11.44□□□□□ -0.58
TNFAIP3-210ENST00000620204 GUCY1B3Q02153 619 aa11.44□□□□□ -0.58
TNFAIP3-210ENST00000620204 ME3Q16798 604 aa11.44□□□□□ -0.58
TNFAIP3-210ENST00000620204 ESCO1Q5FWF5 840 aa11.44□□□□□ -0.58
TNFAIP3-210ENST00000620204 LARP1Q6PKG0 1096 aaKnown RBP11.44□□□□□ -0.58
TNFAIP3-210ENST00000620204 C11orf57Q6ZUT1 292 aaPredicted RBP11.44□□□□□ -0.58
TNFAIP3-210ENST00000620204 PDILTQ8N807 584 aa11.44□□□□□ -0.58
TNFAIP3-210ENST00000620204 PPLO60437 1756 aa11.44□□□□□ -0.58
TNFAIP3-210ENST00000620204 UBTFL1P0CB47 393 aaPredicted RBP11.43□□□□□ -0.58
TNFAIP3-210ENST00000620204 SIL1Q9H173 461 aa11.43□□□□□ -0.58
TNFAIP3-210ENST00000620204 CCDC9Q9Y3X0 531 aaKnown RBP11.43□□□□□ -0.58
TNFAIP3-210ENST00000620204 SMC1AQ14683 1233 aaKnown RBP11.43□□□□□ -0.58
TNFAIP3-210ENST00000620204 PROSER2Q86WR7 435 aaPredicted RBP11.43□□□□□ -0.58
TNFAIP3-210ENST00000620204 NEMFO60524 1076 aa11.43□□□□□ -0.58
TNFAIP3-210ENST00000620204 SART3Q15020 963 aaKnown RBP11.43□□□□□ -0.58
TNFAIP3-210ENST00000620204 HSP90AA4PQ58FG1 418 aa11.43□□□□□ -0.58
TNFAIP3-210ENST00000620204 TTLL5Q6EMB2 1281 aa11.43□□□□□ -0.58
TNFAIP3-210ENST00000620204 DEF6Q9H4E7 631 aa11.43□□□□□ -0.58
TNFAIP3-210ENST00000620204 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.43□□□□□ -0.58
TNFAIP3-210ENST00000620204 ALKQ9UM73 1620 aa11.43□□□□□ -0.58
TNFAIP3-210ENST00000620204 ZC3H13Q5T200 1668 aaKnown RBP11.43□□□□□ -0.58
TNFAIP3-210ENST00000620204 TMEM131LA2VDJ0 1609 aa11.42□□□□□ -0.58
TNFAIP3-210ENST00000620204 ROBO2Q9HCK4 1378 aa11.42□□□□□ -0.58
TNFAIP3-210ENST00000620204 PLA2G4AP47712 749 aa11.42□□□□□ -0.58
TNFAIP3-210ENST00000620204 EVCP57679 992 aa11.42□□□□□ -0.58
TNFAIP3-210ENST00000620204 PLA2G4DQ86XP0 818 aa11.42□□□□□ -0.58
TNFAIP3-210ENST00000620204 CEP57L1Q8IYX8 460 aa11.42□□□□□ -0.58
TNFAIP3-210ENST00000620204 LEO1Q8WVC0 666 aaPredicted RBP11.42□□□□□ -0.58
TNFAIP3-210ENST00000620204 IQGAP1P46940 1657 aa11.42□□□□□ -0.58
TNFAIP3-210ENST00000620204 NPHP3Q7Z494 1330 aa11.42□□□□□ -0.58
TNFAIP3-210ENST00000620204 KIF2AO00139 706 aaPredicted RBP11.42□□□□□ -0.58
TNFAIP3-210ENST00000620204 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.42□□□□□ -0.58
TNFAIP3-210ENST00000620204 RUFY2Q8WXA3 655 aa11.42□□□□□ -0.58
TNFAIP3-210ENST00000620204 VPS18Q9P253 973 aa11.42□□□□□ -0.58
TNFAIP3-210ENST00000620204 SRGAP3O43295 1099 aa11.42□□□□□ -0.58
TNFAIP3-210ENST00000620204 GNAI3P08754 354 aa11.42□□□□□ -0.58
TNFAIP3-210ENST00000620204 EIF2S2P20042 333 aaKnown RBP11.42□□□□□ -0.58
TNFAIP3-210ENST00000620204 IBSPP21815 317 aaPredicted RBP11.42□□□□□ -0.58
TNFAIP3-210ENST00000620204 BRPF1P55201 1214 aaPredicted RBP11.42□□□□□ -0.58
TNFAIP3-210ENST00000620204 ZSCAN31Q96LW9 406 aaPredicted RBP11.42□□□□□ -0.58
TNFAIP3-210ENST00000620204 CLSTN2Q9H4D0 955 aa11.42□□□□□ -0.58
TNFAIP3-210ENST00000620204 IFNKQ9P0W0 207 aa11.42□□□□□ -0.58
TNFAIP3-210ENST00000620204 FHOD1Q9Y613 1164 aa11.42□□□□□ -0.58
TNFAIP3-210ENST00000620204 ACEP12821 1306 aa11.42□□□□□ -0.58
TNFAIP3-210ENST00000620204 DHX16O60231 1041 aaKnown RBP11.41□□□□□ -0.58
TNFAIP3-210ENST00000620204 CASQ1P31415 396 aa11.41□□□□□ -0.58
TNFAIP3-210ENST00000620204 CCT4P50991 539 aaKnown RBP11.41□□□□□ -0.58
TNFAIP3-210ENST00000620204 NLRP6P59044 892 aa11.41□□□□□ -0.58
TNFAIP3-210ENST00000620204 CCAR1Q8IX12 1150 aaKnown RBP11.41□□□□□ -0.58
TNFAIP3-210ENST00000620204 RGS22Q8NE09 1264 aa11.41□□□□□ -0.58
TNFAIP3-210ENST00000620204 TDRD7Q8NHU6 1098 aaKnown RBP11.41□□□□□ -0.58
TNFAIP3-210ENST00000620204 TULP2O00295 520 aa11.41□□□□□ -0.58
TNFAIP3-210ENST00000620204 NCBP3Q53F19 620 aaKnown RBP11.41□□□□□ -0.58
TNFAIP3-210ENST00000620204 CCDC102AQ96A19 550 aa11.41□□□□□ -0.58
TNFAIP3-210ENST00000620204 PLEKHA4Q9H4M7 779 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms