RNA–Protein interactions for RNA: ENST00000613941.4

SRSF3-204, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 4

Gene SRSF3, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-204ENST00000613941 ZNF790Q6PG37 636 aa14.33□□□□□ -0.12
SRSF3-204ENST00000613941 DLK2Q6UY11 383 aa14.33□□□□□ -0.12
SRSF3-204ENST00000613941 NIP7Q9Y221 180 aaKnown RBP eCLIP14.33□□□□□ -0.12
SRSF3-204ENST00000613941 TCERG1O14776 1098 aaKnown RBP14.32□□□□□ -0.12
SRSF3-204ENST00000613941 TRPA1O75762 1119 aa14.32□□□□□ -0.12
SRSF3-204ENST00000613941 HUNKP57058 714 aa14.32□□□□□ -0.12
SRSF3-204ENST00000613941 NIM1KQ8IY84 436 aa14.32□□□□□ -0.12
SRSF3-204ENST00000613941 TEX13AQ9BXU3 409 aaPredicted RBP14.32□□□□□ -0.12
SRSF3-204ENST00000613941 KCNQ3O43525 872 aa14.31□□□□□ -0.12
SRSF3-204ENST00000613941 TPTE2Q6XPS3 522 aa14.31□□□□□ -0.12
SRSF3-204ENST00000613941 MORC1Q86VD1 984 aa14.31□□□□□ -0.12
SRSF3-204ENST00000613941 PRAMEF22A3QJZ6 481 aa14.3□□□□□ -0.12
SRSF3-204ENST00000613941 FAM155AB1AL88 458 aaPredicted RBP14.3□□□□□ -0.12
SRSF3-204ENST00000613941 GMPSP49915 693 aaPredicted RBP14.3□□□□□ -0.12
SRSF3-204ENST00000613941 TEFQ10587 303 aa14.3□□□□□ -0.12
SRSF3-204ENST00000613941 AOC3Q16853 763 aa14.3□□□□□ -0.12
SRSF3-204ENST00000613941 CTU1Q7Z7A3 348 aaKnown RBP14.3□□□□□ -0.12
SRSF3-204ENST00000613941 TRPM4Q8TD43 1214 aa14.3□□□□□ -0.12
SRSF3-204ENST00000613941 FMNL2Q96PY5 1086 aa14.3□□□□□ -0.12
SRSF3-204ENST00000613941 RNF186Q9NXI6 227 aa14.3□□□□□ -0.12
SRSF3-204ENST00000613941 HPS5Q9UPZ3 1129 aa14.3□□□□□ -0.12
SRSF3-204ENST00000613941 ZNF652Q9Y2D9 606 aa14.3□□□□□ -0.12
SRSF3-204ENST00000613941 NPC1L1Q9UHC9 1359 aa14.3□□□□□ -0.12
SRSF3-204ENST00000613941 PAPPA2Q9BXP8 1791 aa14.29□□□□□ -0.12
SRSF3-204ENST00000613941 SHTN1A0MZ66 631 aa14.29□□□□□ -0.12
SRSF3-204ENST00000613941 PPIP5K2O43314 1243 aa14.29□□□□□ -0.12
SRSF3-204ENST00000613941 HIRAP54198 1017 aaPredicted RBP14.29□□□□□ -0.12
SRSF3-204ENST00000613941 KIF23Q02241 960 aaPredicted RBP14.29□□□□□ -0.12
SRSF3-204ENST00000613941 HABP4Q5JVS0 413 aaKnown RBP14.29□□□□□ -0.12
SRSF3-204ENST00000613941 CLEC4GQ6UXB4 293 aa14.29□□□□□ -0.12
SRSF3-204ENST00000613941 NUTM1Q86Y26 1132 aa14.29□□□□□ -0.12
SRSF3-204ENST00000613941 NBPF15Q8N660 670 aa14.29□□□□□ -0.12
SRSF3-204ENST00000613941 GCC1Q96CN9 775 aa14.29□□□□□ -0.12
SRSF3-204ENST00000613941 SAGE1Q9NXZ1 904 aa14.29□□□□□ -0.12
SRSF3-204ENST00000613941 USP16Q9Y5T5 823 aa14.29□□□□□ -0.12
SRSF3-204ENST00000613941 GTF2E1P29083 439 aaPredicted RBP14.28□□□□□ -0.12
SRSF3-204ENST00000613941 CXCL9Q07325 125 aa14.28□□□□□ -0.12
SRSF3-204ENST00000613941 IL17REQ8NFR9 667 aa14.28□□□□□ -0.12
SRSF3-204ENST00000613941 PANK3Q9H999 370 aa14.28□□□□□ -0.12
SRSF3-204ENST00000613941 HLFQ16534 295 aa14.27□□□□□ -0.13
SRSF3-204ENST00000613941 CRY2Q49AN0 593 aa14.27□□□□□ -0.13
SRSF3-204ENST00000613941 RGMBQ6NW40 437 aa14.27□□□□□ -0.13
SRSF3-204ENST00000613941 CDC37L1Q7L3B6 337 aa14.27□□□□□ -0.13
SRSF3-204ENST00000613941 USP48Q86UV5 1035 aa14.27□□□□□ -0.13
SRSF3-204ENST00000613941 PGAP2Q9UHJ9 254 aa14.27□□□□□ -0.13
SRSF3-204ENST00000613941 RBBP6Q7Z6E9 1792 aaKnown RBP14.27□□□□□ -0.13
SRSF3-204ENST00000613941 RIC1Q4ADV7 1423 aa14.26□□□□□ -0.13
SRSF3-204ENST00000613941 CENPFP49454 3210 aa14.26□□□□□ -0.13
SRSF3-204ENST00000613941 PPEF1O14829 653 aaPredicted RBP14.26□□□□□ -0.13
SRSF3-204ENST00000613941 CC2D2BQ6DHV5 1058 aa14.26□□□□□ -0.13
SRSF3-204ENST00000613941 RPGRQ92834 1020 aaKnown RBP14.26□□□□□ -0.13
SRSF3-204ENST00000613941 ANKRD36CQ5JPF3 1778 aa14.25□□□□□ -0.13
SRSF3-204ENST00000613941 BCL2L13Q9BXK5 485 aa14.25□□□□□ -0.13
SRSF3-204ENST00000613941 RAD17O75943 681 aa14.24□□□□□ -0.13
SRSF3-204ENST00000613941 ZNF157P51786 506 aaPredicted RBP14.24□□□□□ -0.13
SRSF3-204ENST00000613941 GBA2Q9HCG7 927 aaPredicted RBP14.24□□□□□ -0.13
SRSF3-204ENST00000613941 DDX60Q8IY21 1712 aaKnown RBP14.24□□□□□ -0.13
SRSF3-204ENST00000613941 GNAT3A8MTJ3 354 aa14.23□□□□□ -0.13
SRSF3-204ENST00000613941 NBPF26B4DH59 902 aa14.23□□□□□ -0.13
SRSF3-204ENST00000613941 NBPF10Q6P3W6 841 aaKnown RBP14.23□□□□□ -0.13
SRSF3-204ENST00000613941 ZC3H15Q8WU90 426 aaKnown RBP14.23□□□□□ -0.13
SRSF3-204ENST00000613941 CSRNP1Q96S65 589 aa14.23□□□□□ -0.13
SRSF3-204ENST00000613941 ZNRF3Q9ULT6 936 aa14.23□□□□□ -0.13
SRSF3-204ENST00000613941 HTTP42858 3142 aa14.23□□□□□ -0.13
SRSF3-204ENST00000613941 BTBD11A6QL63 1104 aa14.22□□□□□ -0.13
SRSF3-204ENST00000613941 ADM5C9JUS6 153 aa14.22□□□□□ -0.13
SRSF3-204ENST00000613941 FXR1P51114 621 aaKnown RBP eCLIP14.22□□□□□ -0.13
SRSF3-204ENST00000613941 C3orf67Q6ZVT6 689 aa14.22□□□□□ -0.13
SRSF3-204ENST00000613941 CCDC102AQ96A19 550 aa14.22□□□□□ -0.13
SRSF3-204ENST00000613941 KIAA0100Q14667 2235 aaKnown RBP14.22□□□□□ -0.13
SRSF3-204ENST00000613941 BRCA2P51587 3418 aa14.22□□□□□ -0.13
SRSF3-204ENST00000613941 SCN9AQ15858 1988 aa14.22□□□□□ -0.13
SRSF3-204ENST00000613941 CDHR2Q9BYE9 1310 aa14.21□□□□□ -0.13
SRSF3-204ENST00000613941 SLC10A3P09131 477 aa14.21□□□□□ -0.13
SRSF3-204ENST00000613941 HOXA10P31260 410 aaPredicted RBP14.21□□□□□ -0.13
SRSF3-204ENST00000613941 C2orf69Q8N8R5 385 aa14.21□□□□□ -0.13
SRSF3-204ENST00000613941 CNOT7Q9UIV1 285 aaKnown RBP14.21□□□□□ -0.13
SRSF3-204ENST00000613941 SZT2Q5T011 3432 aa14.21□□□□□ -0.13
SRSF3-204ENST00000613941 DUOX1Q9NRD9 1551 aa14.21□□□□□ -0.14
SRSF3-204ENST00000613941 CEMIPQ8WUJ3 1361 aa14.21□□□□□ -0.14
SRSF3-204ENST00000613941 EGFRP00533 1210 aa14.2□□□□□ -0.14
SRSF3-204ENST00000613941 GRIPAP1Q4V328 841 aa14.2□□□□□ -0.14
SRSF3-204ENST00000613941 SAMD7Q7Z3H4 446 aa14.2□□□□□ -0.14
SRSF3-204ENST00000613941 KRT26Q7Z3Y9 468 aa14.2□□□□□ -0.14
SRSF3-204ENST00000613941 MICALL2Q8IY33 904 aa14.2□□□□□ -0.14
SRSF3-204ENST00000613941 RBM17Q96I25 401 aaKnown RBP14.2□□□□□ -0.14
SRSF3-204ENST00000613941 NYXQ9GZU5 481 aa14.2□□□□□ -0.14
SRSF3-204ENST00000613941 HDAC9Q9UKV0 1011 aa14.2□□□□□ -0.14
SRSF3-204ENST00000613941 LRRC37AA6NMS7 1700 aa14.2□□□□□ -0.14
SRSF3-204ENST00000613941 DLG5Q8TDM6 1919 aa14.19□□□□□ -0.14
SRSF3-204ENST00000613941 KIF7Q2M1P5 1343 aa14.19□□□□□ -0.14
SRSF3-204ENST00000613941 UBN2Q6ZU65 1347 aa14.19□□□□□ -0.14
SRSF3-204ENST00000613941 GPTP24298 496 aa14.19□□□□□ -0.14
SRSF3-204ENST00000613941 TBC1D10BQ4KMP7 808 aaPredicted RBP14.19□□□□□ -0.14
SRSF3-204ENST00000613941 NGEFQ8N5V2 710 aa14.19□□□□□ -0.14
SRSF3-204ENST00000613941 ZNF296Q8WUU4 475 aaPredicted RBP14.19□□□□□ -0.14
SRSF3-204ENST00000613941 CRAMP1Q96RY5 1269 aa14.19□□□□□ -0.14
SRSF3-204ENST00000613941 ZBTB12Q9Y330 459 aaPredicted RBP14.19□□□□□ -0.14
SRSF3-204ENST00000613941 YDJCA8MPS7 323 aa14.18□□□□□ -0.14
SRSF3-204ENST00000613941 DIAPH1O60610 1272 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms