RNA–Protein interactions for RNA: ENST00000613214.4

TNXB-209, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-209ENST00000613214 PRKG1Q13976 671 aa17.77■□□□□ 0.44
TNXB-209ENST00000613214 C20orf194Q5TEA3 1177 aa17.77■□□□□ 0.44
TNXB-209ENST00000613214 TCP11L1Q9NUJ3 509 aa17.77■□□□□ 0.44
TNXB-209ENST00000613214 SSFA2P28290 1259 aa17.77■□□□□ 0.44
TNXB-209ENST00000613214 TCHPQ9BT92 498 aa17.77■□□□□ 0.44
TNXB-209ENST00000613214 CCDC196A0A1B0GTZ2 297 aa17.77■□□□□ 0.43
TNXB-209ENST00000613214 SMIM23A6NLE4 172 aa17.77■□□□□ 0.43
TNXB-209ENST00000613214 PPARDQ03181 441 aa17.77■□□□□ 0.43
TNXB-209ENST00000613214 PDCL2Q8N4E4 241 aa17.77■□□□□ 0.43
TNXB-209ENST00000613214 TAF12Q16514 161 aa17.77■□□□□ 0.43
TNXB-209ENST00000613214 USP25Q9UHP3 1055 aa17.77■□□□□ 0.43
TNXB-209ENST00000613214 CFTRP13569 1480 aa17.76■□□□□ 0.43
TNXB-209ENST00000613214 METAP2P50579 478 aaKnown RBP eCLIP17.76■□□□□ 0.43
TNXB-209ENST00000613214 WDR63Q8IWG1 891 aa17.76■□□□□ 0.43
TNXB-209ENST00000613214 NECAB1Q8N987 351 aa17.76■□□□□ 0.43
TNXB-209ENST00000613214 CCDC63Q8NA47 563 aa17.76■□□□□ 0.43
TNXB-209ENST00000613214 UTP14AQ9BVJ6 771 aaKnown RBP17.76■□□□□ 0.43
TNXB-209ENST00000613214 ANO10Q9NW15 660 aa17.76■□□□□ 0.43
TNXB-209ENST00000613214 NCOA2Q15596 1464 aa17.76■□□□□ 0.43
TNXB-209ENST00000613214 USO1O60763 962 aaKnown RBP17.76■□□□□ 0.43
TNXB-209ENST00000613214 LRSAM1Q6UWE0 723 aa17.76■□□□□ 0.43
TNXB-209ENST00000613214 EP400NLQ6ZTU2 488 aa17.76■□□□□ 0.43
TNXB-209ENST00000613214 CHST3Q7LGC8 479 aa17.76■□□□□ 0.43
TNXB-209ENST00000613214 A0A1W2PRG0 241 aa17.76■□□□□ 0.43
TNXB-209ENST00000613214 YEATS4O95619 227 aa17.76■□□□□ 0.43
TNXB-209ENST00000613214 FBXO31Q5XUX0 539 aaPredicted RBP17.76■□□□□ 0.43
TNXB-209ENST00000613214 PAFAH1B1P43034 410 aa17.76■□□□□ 0.43
TNXB-209ENST00000613214 SLC39A6Q13433 755 aa17.76■□□□□ 0.43
TNXB-209ENST00000613214 DNAAF4Q8WXU2 420 aa17.76■□□□□ 0.43
TNXB-209ENST00000613214 SH3BP5O60239 455 aa17.75■□□□□ 0.43
TNXB-209ENST00000613214 IPO4Q8TEX9 1081 aaKnown RBP17.75■□□□□ 0.43
TNXB-209ENST00000613214 TBCAO75347 108 aaKnown RBP17.75■□□□□ 0.43
TNXB-209ENST00000613214 HARSP12081 509 aaKnown RBP17.75■□□□□ 0.43
TNXB-209ENST00000613214 EEF2P13639 858 aaKnown RBP17.75■□□□□ 0.43
TNXB-209ENST00000613214 FGFR1OPO95684 399 aaKnown RBP17.75■□□□□ 0.43
TNXB-209ENST00000613214 PSMC4P43686 418 aa17.75■□□□□ 0.43
TNXB-209ENST00000613214 PDE4BQ07343 736 aa17.75■□□□□ 0.43
TNXB-209ENST00000613214 AMOTL2Q9Y2J4 779 aa17.75■□□□□ 0.43
TNXB-209ENST00000613214 MXRA7P84157 204 aa17.75■□□□□ 0.43
TNXB-209ENST00000613214 CETN1Q12798 172 aa17.75■□□□□ 0.43
TNXB-209ENST00000613214 FSD2A1L4K1 749 aa17.75■□□□□ 0.43
TNXB-209ENST00000613214 CYP7A1P22680 504 aa17.75■□□□□ 0.43
TNXB-209ENST00000613214 BAG3O95817 575 aa17.74■□□□□ 0.43
TNXB-209ENST00000613214 EXOC1Q9NV70 894 aa17.74■□□□□ 0.43
TNXB-209ENST00000613214 CWC25Q9NXE8 425 aaPredicted RBP17.74■□□□□ 0.43
TNXB-209ENST00000613214 CUX1P39880 1505 aa17.74■□□□□ 0.43
TNXB-209ENST00000613214 CABLES1Q8TDN4 633 aa17.74■□□□□ 0.43
TNXB-209ENST00000613214 UBAP1LF5GYI3 381 aa17.74■□□□□ 0.43
TNXB-209ENST00000613214 AAMPQ13685 434 aa17.74■□□□□ 0.43
TNXB-209ENST00000613214 TRIM47Q96LD4 638 aa17.74■□□□□ 0.43
TNXB-209ENST00000613214 SLC4A4Q9Y6R1 1079 aa17.74■□□□□ 0.43
TNXB-209ENST00000613214 UBA7P41226 1012 aa17.73■□□□□ 0.43
TNXB-209ENST00000613214 IARSP41252 1262 aaKnown RBP17.73■□□□□ 0.43
TNXB-209ENST00000613214 IKBKGQ9Y6K9 419 aa17.73■□□□□ 0.43
TNXB-209ENST00000613214 CSPG5O95196 566 aa17.73■□□□□ 0.43
TNXB-209ENST00000613214 GSTA5Q7RTV2 222 aa17.73■□□□□ 0.43
TNXB-209ENST00000613214 CDC5LQ99459 802 aaKnown RBP17.73■□□□□ 0.43
TNXB-209ENST00000613214 TMCO4Q5TGY1 634 aa17.73■□□□□ 0.43
TNXB-209ENST00000613214 CTR9Q6PD62 1173 aa17.73■□□□□ 0.43
TNXB-209ENST00000613214 STX6O43752 255 aa17.73■□□□□ 0.43
TNXB-209ENST00000613214 GPATCH11Q8N954 259 aa17.73■□□□□ 0.43
TNXB-209ENST00000613214 SSH1Q8WYL5 1049 aa17.73■□□□□ 0.43
TNXB-209ENST00000613214 FCHSD2O94868 740 aa17.72■□□□□ 0.43
TNXB-209ENST00000613214 MTERF4Q7Z6M4 381 aaKnown RBP17.72■□□□□ 0.43
TNXB-209ENST00000613214 CCDC50Q8IVM0 306 aa17.72■□□□□ 0.43
TNXB-209ENST00000613214 HELBQ8NG08 1087 aaPredicted RBP17.72■□□□□ 0.43
TNXB-209ENST00000613214 ZNF830Q96NB3 372 aaPredicted RBP17.72■□□□□ 0.43
TNXB-209ENST00000613214 IFIT1BQ5T764 474 aaKnown RBP17.72■□□□□ 0.43
TNXB-209ENST00000613214 SETDB2Q96T68 719 aa17.72■□□□□ 0.43
TNXB-209ENST00000613214 MCM4P33991 863 aa17.72■□□□□ 0.43
TNXB-209ENST00000613214 RNF41Q9H4P4 317 aaPredicted RBP17.72■□□□□ 0.43
TNXB-209ENST00000613214 KRT13P13646 458 aa17.72■□□□□ 0.43
TNXB-209ENST00000613214 SAP30BPQ9UHR5 308 aaKnown RBP17.72■□□□□ 0.43
TNXB-209ENST00000613214 PHF8Q9UPP1 1060 aa17.72■□□□□ 0.43
TNXB-209ENST00000613214 ZSCAN12O43309 604 aa17.72■□□□□ 0.43
TNXB-209ENST00000613214 PPM1EQ8WY54 764 aa17.72■□□□□ 0.43
TNXB-209ENST00000613214 MIGA1Q8NAN2 632 aa17.72■□□□□ 0.43
TNXB-209ENST00000613214 CCDC183Q5T5S1 534 aa17.71■□□□□ 0.43
TNXB-209ENST00000613214 ORC3Q9UBD5 711 aaPredicted RBP17.71■□□□□ 0.43
TNXB-209ENST00000613214 ACTN2P35609 894 aa17.71■□□□□ 0.43
TNXB-209ENST00000613214 RRAGBQ5VZM2 374 aa17.71■□□□□ 0.43
TNXB-209ENST00000613214 PPP1R42Q7Z4L9 355 aa17.71■□□□□ 0.43
TNXB-209ENST00000613214 CIZ1Q9ULV3 898 aaPredicted RBP17.71■□□□□ 0.43
TNXB-209ENST00000613214 NDC80O14777 642 aa17.71■□□□□ 0.43
TNXB-209ENST00000613214 TFCP2L1Q9NZI6 479 aa17.71■□□□□ 0.43
TNXB-209ENST00000613214 C9orf84Q5VXU9 1444 aa17.71■□□□□ 0.43
TNXB-209ENST00000613214 MARCKSP29966 332 aaPredicted RBP17.71■□□□□ 0.43
TNXB-209ENST00000613214 RAB3IL1Q8TBN0 382 aa17.71■□□□□ 0.43
TNXB-209ENST00000613214 ALS2CR12Q96Q35 445 aa17.71■□□□□ 0.43
TNXB-209ENST00000613214 GINS2Q9Y248 185 aa17.71■□□□□ 0.43
TNXB-209ENST00000613214 CCDC61Q9Y6R9 512 aa17.71■□□□□ 0.43
TNXB-209ENST00000613214 CCDC175P0C221 793 aa17.7■□□□□ 0.42
TNXB-209ENST00000613214 RXRAP19793 462 aa17.7■□□□□ 0.42
TNXB-209ENST00000613214 FNBP4Q8N3X1 1017 aaPredicted RBP17.7■□□□□ 0.42
TNXB-209ENST00000613214 ZYXQ15942 572 aaKnown RBP17.7■□□□□ 0.42
TNXB-209ENST00000613214 GTF2F1P35269 517 aaKnown RBP eCLIP17.7■□□□□ 0.42
TNXB-209ENST00000613214 KIF5BP33176 963 aa17.7■□□□□ 0.42
TNXB-209ENST00000613214 IRX5P78411 483 aaPredicted RBP17.7■□□□□ 0.42
TNXB-209ENST00000613214 RPAP2Q8IXW5 612 aaPredicted RBP17.7■□□□□ 0.42
TNXB-209ENST00000613214 BACH2Q9BYV9 841 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms