RNA–Protein interactions for RNA: ENST00000602540.5

PHLDA1-202, Transcript of pleckstrin homology like domain family A member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHLDA1, Length 5,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDA1-202ENST00000602540 FOXO3O43524 673 aa21.51■■□□□ 1.03
PHLDA1-202ENST00000602540 ADAMTS2O95450 1211 aa21.51■■□□□ 1.03
PHLDA1-202ENST00000602540 C16orf45Q96MC5 204 aaPredicted RBP21.5■■□□□ 1.03
PHLDA1-202ENST00000602540 TMX1Q9H3N1 280 aa21.5■■□□□ 1.03
PHLDA1-202ENST00000602540 UQCRFS1P1P0C7P4 283 aa21.5■■□□□ 1.03
PHLDA1-202ENST00000602540 MICU3Q86XE3 530 aa21.5■■□□□ 1.03
PHLDA1-202ENST00000602540 GIMAP7Q8NHV1 300 aa21.5■■□□□ 1.03
PHLDA1-202ENST00000602540 SYCP3Q8IZU3 236 aa21.5■■□□□ 1.03
PHLDA1-202ENST00000602540 SLC26A6Q9BXS9 759 aa21.5■■□□□ 1.03
PHLDA1-202ENST00000602540 UBE4AQ14139 1066 aa21.5■■□□□ 1.03
PHLDA1-202ENST00000602540 VAT1LQ9HCJ6 419 aa21.5■■□□□ 1.03
PHLDA1-202ENST00000602540 PRC1O43663 620 aa21.49■■□□□ 1.03
PHLDA1-202ENST00000602540 UBE2HP62256 183 aa21.49■■□□□ 1.03
PHLDA1-202ENST00000602540 TTC22Q5TAA0 569 aa21.49■■□□□ 1.03
PHLDA1-202ENST00000602540 ZSCAN16Q9H4T2 348 aaPredicted RBP21.49■■□□□ 1.03
PHLDA1-202ENST00000602540 KIAA0586Q9BVV6 1533 aa21.49■■□□□ 1.03
PHLDA1-202ENST00000602540 UVSSAQ2YD98 709 aa21.49■■□□□ 1.03
PHLDA1-202ENST00000602540 ADCY5O95622 1261 aa21.49■■□□□ 1.03
PHLDA1-202ENST00000602540 RMND1Q9NWS8 449 aa21.49■■□□□ 1.03
PHLDA1-202ENST00000602540 SNRKQ9NRH2 765 aa21.49■■□□□ 1.03
PHLDA1-202ENST00000602540 CD109Q6YHK3 1445 aa21.49■■□□□ 1.03
PHLDA1-202ENST00000602540 GSTO1P78417 241 aa21.48■■□□□ 1.03
PHLDA1-202ENST00000602540 FAM107BQ9H098 131 aa21.48■■□□□ 1.03
PHLDA1-202ENST00000602540 GDPD2Q9HCC8 539 aa21.48■■□□□ 1.03
PHLDA1-202ENST00000602540 CCDC175P0C221 793 aa21.48■■□□□ 1.03
PHLDA1-202ENST00000602540 SNW1Q13573 536 aaKnown RBP21.48■■□□□ 1.03
PHLDA1-202ENST00000602540 SMARCC1Q92922 1105 aaPredicted RBP21.48■■□□□ 1.03
PHLDA1-202ENST00000602540 MCM5P33992 734 aa21.48■■□□□ 1.03
PHLDA1-202ENST00000602540 NOP2P46087 812 aaKnown RBP21.48■■□□□ 1.03
PHLDA1-202ENST00000602540 HAND2P61296 217 aa21.48■■□□□ 1.03
PHLDA1-202ENST00000602540 CBX1P83916 185 aa21.48■■□□□ 1.03
PHLDA1-202ENST00000602540 CRNKL1Q9BZJ0 848 aaKnown RBP21.48■■□□□ 1.03
PHLDA1-202ENST00000602540 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.48■■□□□ 1.038e-9■■■■□ 20.1
PHLDA1-202ENST00000602540 ZNF165P49910 485 aa21.48■■□□□ 1.03
PHLDA1-202ENST00000602540 EHBP1Q8NDI1 1231 aa21.48■■□□□ 1.03
PHLDA1-202ENST00000602540 PKNOX2Q96KN3 472 aa21.48■■□□□ 1.03
PHLDA1-202ENST00000602540 PRPF4BQ13523 1007 aaKnown RBP21.47■■□□□ 1.03
PHLDA1-202ENST00000602540 IFI16Q16666 785 aaKnown RBP21.47■■□□□ 1.03
PHLDA1-202ENST00000602540 RNF187Q5TA31 235 aaPredicted RBP21.47■■□□□ 1.03
PHLDA1-202ENST00000602540 IL16Q14005 1332 aa21.47■■□□□ 1.03
PHLDA1-202ENST00000602540 UBE3BQ7Z3V4 1068 aa21.47■■□□□ 1.03
PHLDA1-202ENST00000602540 PANK2Q9BZ23 570 aa21.47■■□□□ 1.03
PHLDA1-202ENST00000602540 ZNF219Q9P2Y4 722 aaPredicted RBP21.47■■□□□ 1.03
PHLDA1-202ENST00000602540 ATP5J2-PTCD1G3V325 749 aa21.47■■□□□ 1.03
PHLDA1-202ENST00000602540 MBIPQ9NS73 344 aa21.47■■□□□ 1.03
PHLDA1-202ENST00000602540 EXOC1Q9NV70 894 aa21.46■■□□□ 1.03
PHLDA1-202ENST00000602540 CCDC172P0C7W6 258 aa21.46■■□□□ 1.03
PHLDA1-202ENST00000602540 FERMT1Q9BQL6 677 aa21.46■■□□□ 1.03
PHLDA1-202ENST00000602540 SAMM50Q9Y512 469 aa21.46■■□□□ 1.03
PHLDA1-202ENST00000602540 ADGRF5Q8IZF2 1346 aa21.46■■□□□ 1.03
PHLDA1-202ENST00000602540 TBCAO75347 108 aaKnown RBP21.46■■□□□ 1.03
PHLDA1-202ENST00000602540 CTR9Q6PD62 1173 aa21.46■■□□□ 1.03
PHLDA1-202ENST00000602540 KRT28Q7Z3Y7 464 aa21.46■■□□□ 1.03
PHLDA1-202ENST00000602540 NCOA1Q15788 1441 aa21.46■■□□□ 1.03
PHLDA1-202ENST00000602540 FSD2A1L4K1 749 aa21.46■■□□□ 1.03
PHLDA1-202ENST00000602540 PI4KAP2A4QPH2 592 aa21.46■■□□□ 1.03
PHLDA1-202ENST00000602540 POLR3GO15318 223 aaPredicted RBP21.46■■□□□ 1.03
PHLDA1-202ENST00000602540 SNRPA1P09661 255 aaKnown RBP21.46■■□□□ 1.03
PHLDA1-202ENST00000602540 NBPF7P0C2Y1 421 aaPredicted RBP21.46■■□□□ 1.03
PHLDA1-202ENST00000602540 PI4KAP1Q8N8J0 262 aa21.46■■□□□ 1.03
PHLDA1-202ENST00000602540 SCAF11Q99590 1463 aaKnown RBP21.46■■□□□ 1.03
PHLDA1-202ENST00000602540 GIGYF2Q6Y7W6 1299 aaKnown RBP21.45■■□□□ 1.02
PHLDA1-202ENST00000602540 ADGRL1O94910 1474 aa21.45■■□□□ 1.02
PHLDA1-202ENST00000602540 BMP15O95972 392 aa21.45■■□□□ 1.02
PHLDA1-202ENST00000602540 ERMNQ8TAM6 284 aa21.45■■□□□ 1.02
PHLDA1-202ENST00000602540 MPHOSPH6Q99547 160 aaKnown RBP21.45■■□□□ 1.02
PHLDA1-202ENST00000602540 KRT23Q9C075 422 aa21.45■■□□□ 1.02
PHLDA1-202ENST00000602540 TRIM47Q96LD4 638 aa21.45■■□□□ 1.02
PHLDA1-202ENST00000602540 CCDC174Q6PII3 467 aa21.44■■□□□ 1.02
PHLDA1-202ENST00000602540 NGLY1Q96IV0 654 aa21.44■■□□□ 1.02
PHLDA1-202ENST00000602540 KIF14Q15058 1648 aa21.44■■□□□ 1.02
PHLDA1-202ENST00000602540 SKAP1Q86WV1 359 aa21.44■■□□□ 1.02
PHLDA1-202ENST00000602540 WTAPQ15007 396 aa21.44■■□□□ 1.02
PHLDA1-202ENST00000602540 TMEM87AQ8NBN3 555 aa21.44■■□□□ 1.02
PHLDA1-202ENST00000602540 JADE2Q9NQC1 790 aa21.44■■□□□ 1.02
PHLDA1-202ENST00000602540 COMMD10Q9Y6G5 202 aa21.44■■□□□ 1.02
PHLDA1-202ENST00000602540 CCDC152Q4G0S7 254 aa21.44■■□□□ 1.02
PHLDA1-202ENST00000602540 MAATS1Q7Z4T9 603 aa21.44■■□□□ 1.02
PHLDA1-202ENST00000602540 ZFYP08048 801 aaPredicted RBP21.43■■□□□ 1.02
PHLDA1-202ENST00000602540 HOMER2Q9NSB8 354 aa21.43■■□□□ 1.02
PHLDA1-202ENST00000602540 N4BP3O15049 544 aa21.43■■□□□ 1.02
PHLDA1-202ENST00000602540 PUF60Q9UHX1 559 aaKnown RBP21.43■■□□□ 1.02
PHLDA1-202ENST00000602540 PTPN23Q9H3S7 1636 aa21.43■■□□□ 1.02
PHLDA1-202ENST00000602540 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.43■■□□□ 1.02
PHLDA1-202ENST00000602540 SYKP43405 635 aa21.42■■□□□ 1.02
PHLDA1-202ENST00000602540 MYCNP04198 464 aaPredicted RBP21.42■■□□□ 1.02
PHLDA1-202ENST00000602540 RBM25P49756 843 aaKnown RBP21.42■■□□□ 1.02
PHLDA1-202ENST00000602540 CALCOCO1Q9P1Z2 691 aa21.42■■□□□ 1.02
PHLDA1-202ENST00000602540 ACTN2P35609 894 aa21.42■■□□□ 1.02
PHLDA1-202ENST00000602540 SPECC1LQ69YQ0 1117 aa21.42■■□□□ 1.02
PHLDA1-202ENST00000602540 RAB11FIP4Q86YS3 637 aa21.42■■□□□ 1.02
PHLDA1-202ENST00000602540 TMTC2Q8N394 836 aa21.42■■□□□ 1.02
PHLDA1-202ENST00000602540 DNMBPQ6XZF7 1577 aa21.42■■□□□ 1.02
PHLDA1-202ENST00000602540 MYO1BO43795 1136 aa21.42■■□□□ 1.02
PHLDA1-202ENST00000602540 ISM2Q6H9L7 571 aa21.42■■□□□ 1.02
PHLDA1-202ENST00000602540 DDX12PQ92771 950 aa21.42■■□□□ 1.02
PHLDA1-202ENST00000602540 DRC1Q96MC2 740 aa21.42■■□□□ 1.02
PHLDA1-202ENST00000602540 CTAGE1Q96RT6 745 aa21.42■■□□□ 1.02
PHLDA1-202ENST00000602540 ANKRD36BQ8N2N9 1353 aa21.42■■□□□ 1.02
PHLDA1-202ENST00000602540 KLF18A0A0U1RQI7 1052 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms