RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 DNMT3AQ9Y6K1 912 aaPredicted RBP6.67□□□□□ -1.34
CKS1BP3-201ENST00000600888 SCRIBQ14160 1630 aa6.67□□□□□ -1.34
CKS1BP3-201ENST00000600888 IGF1RP08069 1367 aa6.67□□□□□ -1.34
CKS1BP3-201ENST00000600888 ABL1P00519 1130 aa6.66□□□□□ -1.34
CKS1BP3-201ENST00000600888 BMP4P12644 408 aa6.66□□□□□ -1.34
CKS1BP3-201ENST00000600888 PDIA4P13667 645 aaKnown RBP6.66□□□□□ -1.34
CKS1BP3-201ENST00000600888 KCNH4Q9UQ05 1017 aa6.66□□□□□ -1.34
CKS1BP3-201ENST00000600888 ZBTB39O15060 712 aa6.65□□□□□ -1.34
CKS1BP3-201ENST00000600888 ADAMTS2O95450 1211 aa6.65□□□□□ -1.34
CKS1BP3-201ENST00000600888 SLURP2P0DP57 97 aa6.65□□□□□ -1.34
CKS1BP3-201ENST00000600888 MAP2K3P46734 347 aa6.65□□□□□ -1.34
CKS1BP3-201ENST00000600888 ARSDP51689 593 aa6.65□□□□□ -1.34
CKS1BP3-201ENST00000600888 MTMR3Q13615 1198 aa6.65□□□□□ -1.34
CKS1BP3-201ENST00000600888 GRIN2CQ14957 1233 aa6.65□□□□□ -1.34
CKS1BP3-201ENST00000600888 ABTB2Q8N961 1025 aa6.65□□□□□ -1.34
CKS1BP3-201ENST00000600888 EPB42P16452 691 aa6.64□□□□□ -1.35
CKS1BP3-201ENST00000600888 GRNP28799 593 aaKnown RBP6.64□□□□□ -1.35
CKS1BP3-201ENST00000600888 SERPINB4P48594 390 aa6.64□□□□□ -1.35
CKS1BP3-201ENST00000600888 FKBP4Q02790 459 aaKnown RBP eCLIP6.64□□□□□ -1.35
CKS1BP3-201ENST00000600888 SF3B2Q13435 895 aaKnown RBP6.64□□□□□ -1.35
CKS1BP3-201ENST00000600888 CCER1Q8TC90 406 aaPredicted RBP6.64□□□□□ -1.35
CKS1BP3-201ENST00000600888 ANO2Q9NQ90 1003 aa6.64□□□□□ -1.35
CKS1BP3-201ENST00000600888 EGFL7Q9UHF1 273 aa6.64□□□□□ -1.35
CKS1BP3-201ENST00000600888 NPR3P17342 541 aa6.63□□□□□ -1.35
CKS1BP3-201ENST00000600888 ZAP70P43403 619 aa6.63□□□□□ -1.35
CKS1BP3-201ENST00000600888 ZNF211Q13398 564 aaPredicted RBP6.63□□□□□ -1.35
CKS1BP3-201ENST00000600888 NOM1Q5C9Z4 860 aaKnown RBP6.63□□□□□ -1.35
CKS1BP3-201ENST00000600888 SLC30A3Q99726 388 aa6.63□□□□□ -1.35
CKS1BP3-201ENST00000600888 PRR12Q9ULL5 1215 aa6.63□□□□□ -1.35
CKS1BP3-201ENST00000600888 GNEQ9Y223 722 aaKnown RBP6.63□□□□□ -1.35
CKS1BP3-201ENST00000600888 USP20Q9Y2K6 914 aa6.63□□□□□ -1.35
CKS1BP3-201ENST00000600888 RTCBQ9Y3I0 505 aaKnown RBP6.63□□□□□ -1.35
CKS1BP3-201ENST00000600888 ICMTO60725 284 aa6.62□□□□□ -1.35
CKS1BP3-201ENST00000600888 FAM13AO94988 1023 aa6.62□□□□□ -1.35
CKS1BP3-201ENST00000600888 LORP23490 312 aaPredicted RBP6.62□□□□□ -1.35
CKS1BP3-201ENST00000600888 MPSTP25325 297 aa6.62□□□□□ -1.35
CKS1BP3-201ENST00000600888 INSM1Q01101 510 aaPredicted RBP6.62□□□□□ -1.35
CKS1BP3-201ENST00000600888 KCNA1Q09470 495 aa6.62□□□□□ -1.35
CKS1BP3-201ENST00000600888 SPEM2Q0P670 501 aa6.62□□□□□ -1.35
CKS1BP3-201ENST00000600888 RGL4Q8IZJ4 473 aa6.62□□□□□ -1.35
CKS1BP3-201ENST00000600888 CMTR1Q8N1G2 835 aaKnown RBP6.62□□□□□ -1.35
CKS1BP3-201ENST00000600888 ACDQ96AP0 544 aa6.62□□□□□ -1.35
CKS1BP3-201ENST00000600888 GSX2Q9BZM3 304 aa6.62□□□□□ -1.35
CKS1BP3-201ENST00000600888 C11orf16Q9NQ32 467 aa6.62□□□□□ -1.35
CKS1BP3-201ENST00000600888 FAM13BQ9NYF5 915 aa6.62□□□□□ -1.35
CKS1BP3-201ENST00000600888 ARAFP10398 606 aa6.61□□□□□ -1.35
CKS1BP3-201ENST00000600888 EIF1AXP47813 144 aaKnown RBP6.61□□□□□ -1.35
CKS1BP3-201ENST00000600888 CCINQ13939 588 aa6.61□□□□□ -1.35
CKS1BP3-201ENST00000600888 LYPD4Q6UWN0 246 aa6.61□□□□□ -1.35
CKS1BP3-201ENST00000600888 ATCAYQ86WG3 371 aa6.61□□□□□ -1.35
CKS1BP3-201ENST00000600888 GPR152Q8TDT2 470 aa6.61□□□□□ -1.35
CKS1BP3-201ENST00000600888 WHAMMQ8TF30 809 aa6.61□□□□□ -1.35
CKS1BP3-201ENST00000600888 PIK3R5Q8WYR1 880 aa6.61□□□□□ -1.35
CKS1BP3-201ENST00000600888 OXCT2Q9BYC2 517 aaPredicted RBP6.61□□□□□ -1.35
CKS1BP3-201ENST00000600888 KLF15Q9UIH9 416 aa6.61□□□□□ -1.35
CKS1BP3-201ENST00000600888 CELA2BP08218 269 aaPredicted RBP6.6□□□□□ -1.35
CKS1BP3-201ENST00000600888 PCBP4P57723 403 aaKnown RBP6.6□□□□□ -1.35
CKS1BP3-201ENST00000600888 NEUROD1Q13562 356 aa6.6□□□□□ -1.35
CKS1BP3-201ENST00000600888 ECM1Q16610 540 aa6.6□□□□□ -1.35
CKS1BP3-201ENST00000600888 ZNF468Q5VIY5 522 aaPredicted RBP6.6□□□□□ -1.35
CKS1BP3-201ENST00000600888 ALKBH2Q6NS38 261 aa6.6□□□□□ -1.35
CKS1BP3-201ENST00000600888 SYT9Q86SS6 491 aa6.6□□□□□ -1.35
CKS1BP3-201ENST00000600888 ZSCAN1Q8NBB4 408 aa6.6□□□□□ -1.35
CKS1BP3-201ENST00000600888 AVENQ9NQS1 362 aaPredicted RBP6.6□□□□□ -1.35
CKS1BP3-201ENST00000600888 GGA1Q9UJY5 639 aa6.6□□□□□ -1.35
CKS1BP3-201ENST00000600888 GDF2Q9UK05 429 aaPredicted RBP6.6□□□□□ -1.35
CKS1BP3-201ENST00000600888 KCNMB2Q9Y691 235 aa6.6□□□□□ -1.35
CKS1BP3-201ENST00000600888 NEURL1BA8MQ27 555 aa6.59□□□□□ -1.35
CKS1BP3-201ENST00000600888 H3BRB1 525 aa6.59□□□□□ -1.35
CKS1BP3-201ENST00000600888 EGFRP00533 1210 aa6.59□□□□□ -1.35
CKS1BP3-201ENST00000600888 ZNF385CQ66K41 422 aaPredicted RBP6.59□□□□□ -1.35
CKS1BP3-201ENST00000600888 RAB44Q7Z6P3 723 aaPredicted RBP6.59□□□□□ -1.35
CKS1BP3-201ENST00000600888 AEBP1Q8IUX7 1158 aa6.59□□□□□ -1.35
CKS1BP3-201ENST00000600888 GLYCTKQ8IVS8 523 aa6.59□□□□□ -1.35
CKS1BP3-201ENST00000600888 HOMEZQ8IX15 550 aa6.59□□□□□ -1.35
CKS1BP3-201ENST00000600888 GOLGA6L1Q8N7Z2 621 aa6.59□□□□□ -1.35
CKS1BP3-201ENST00000600888 BHMTQ93088 406 aa6.59□□□□□ -1.35
CKS1BP3-201ENST00000600888 TUT1Q9H6E5 874 aaKnown RBP6.59□□□□□ -1.35
CKS1BP3-201ENST00000600888 EFCC1Q9HA90 598 aa6.59□□□□□ -1.35
CKS1BP3-201ENST00000600888 IVNS1ABPQ9Y6Y0 642 aa6.59□□□□□ -1.35
CKS1BP3-201ENST00000600888 EIF4G1Q04637 1599 aaKnown RBP6.58□□□□□ -1.36
CKS1BP3-201ENST00000600888 PATL2C9JE40 543 aaKnown RBP6.58□□□□□ -1.36
CKS1BP3-201ENST00000600888 SIN3BO75182 1162 aa6.58□□□□□ -1.36
CKS1BP3-201ENST00000600888 XYLBO75191 536 aa6.58□□□□□ -1.36
CKS1BP3-201ENST00000600888 SASH3O75995 380 aa6.58□□□□□ -1.36
CKS1BP3-201ENST00000600888 BCRP11274 1271 aa6.58□□□□□ -1.36
CKS1BP3-201ENST00000600888 TARSP26639 723 aaKnown RBP6.58□□□□□ -1.36
CKS1BP3-201ENST00000600888 ADH6P28332 368 aa6.58□□□□□ -1.36
CKS1BP3-201ENST00000600888 DNM1Q05193 864 aaKnown RBP6.58□□□□□ -1.36
CKS1BP3-201ENST00000600888 AAMPQ13685 434 aa6.58□□□□□ -1.36
CKS1BP3-201ENST00000600888 C1orf229Q6ZS94 237 aaPredicted RBP6.58□□□□□ -1.36
CKS1BP3-201ENST00000600888 KCTD17Q8N5Z5 321 aa6.58□□□□□ -1.36
CKS1BP3-201ENST00000600888 PNMA5Q96PV4 448 aa6.58□□□□□ -1.36
CKS1BP3-201ENST00000600888 LRRC4BQ9NT99 713 aa6.58□□□□□ -1.36
CKS1BP3-201ENST00000600888 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.58□□□□□ -1.36
CKS1BP3-201ENST00000600888 SOWAHDA6NJG2 315 aa6.57□□□□□ -1.36
CKS1BP3-201ENST00000600888 UBAP1LF5GYI3 381 aa6.57□□□□□ -1.36
CKS1BP3-201ENST00000600888 OIP5O43482 229 aa6.57□□□□□ -1.36
CKS1BP3-201ENST00000600888 MZF1P28698 734 aaPredicted RBP6.57□□□□□ -1.36
CKS1BP3-201ENST00000600888 TRIP4Q15650 581 aaPredicted RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 593.7 ms