RNA–Protein interactions for RNA: ENST00000596613.5

FARP1-220, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-220ENST00000596613 CARD10Q9BWT7 1032 aa11.35□□□□□ -0.59
FARP1-220ENST00000596613 SLC6A16Q9GZN6 736 aa11.35□□□□□ -0.59
FARP1-220ENST00000596613 USP31Q70CQ4 1352 aa11.34□□□□□ -0.59
FARP1-220ENST00000596613 TRAK2O60296 914 aa11.34□□□□□ -0.59
FARP1-220ENST00000596613 TRIM37O94972 964 aa11.34□□□□□ -0.59
FARP1-220ENST00000596613 FMNL1O95466 1100 aaPredicted RBP11.34□□□□□ -0.59
FARP1-220ENST00000596613 APBA3O96018 575 aa11.34□□□□□ -0.59
FARP1-220ENST00000596613 HMX1Q9NP08 348 aaPredicted RBP11.34□□□□□ -0.59
FARP1-220ENST00000596613 CAMTA1Q9Y6Y1 1673 aa11.33□□□□□ -0.6
FARP1-220ENST00000596613 NRKQ7Z2Y5 1582 aa11.33□□□□□ -0.6
FARP1-220ENST00000596613 A0A1W2PP64 1363 aa11.33□□□□□ -0.6
FARP1-220ENST00000596613 ANKRD36BQ8N2N9 1353 aa11.33□□□□□ -0.6
FARP1-220ENST00000596613 FAM182BQ5T319 152 aa11.33□□□□□ -0.6
FARP1-220ENST00000596613 SPRYD7Q5W111 196 aa11.33□□□□□ -0.6
FARP1-220ENST00000596613 DESI1Q6ICB0 168 aa11.33□□□□□ -0.6
FARP1-220ENST00000596613 ZNF598Q86UK7 904 aaKnown RBP11.33□□□□□ -0.6
FARP1-220ENST00000596613 LRRN4Q8WUT4 740 aa11.33□□□□□ -0.6
FARP1-220ENST00000596613 GDPD2Q9HCC8 539 aa11.33□□□□□ -0.6
FARP1-220ENST00000596613 AKAP12Q02952 1782 aa11.33□□□□□ -0.6
FARP1-220ENST00000596613 COL5A2P05997 1499 aaPredicted RBP11.32□□□□□ -0.6
FARP1-220ENST00000596613 NRAPQ86VF7 1730 aa11.32□□□□□ -0.6
FARP1-220ENST00000596613 CCDC7Q96M83 1385 aa11.32□□□□□ -0.6
FARP1-220ENST00000596613 SLIT3O75094 1523 aa11.32□□□□□ -0.6
FARP1-220ENST00000596613 NBPF14Q5TI25 921 aa11.32□□□□□ -0.6
FARP1-220ENST00000596613 DEFB132Q7Z7B7 95 aa11.32□□□□□ -0.6
FARP1-220ENST00000596613 ANKRD24Q8TF21 1146 aa11.32□□□□□ -0.6
FARP1-220ENST00000596613 CRYBG1Q9Y4K1 1723 aa11.32□□□□□ -0.6
FARP1-220ENST00000596613 PER1O15534 1290 aaPredicted RBP11.31□□□□□ -0.6
FARP1-220ENST00000596613 IP6K1Q92551 441 aa11.31□□□□□ -0.6
FARP1-220ENST00000596613 LTV1Q96GA3 475 aaPredicted RBP11.31□□□□□ -0.6
FARP1-220ENST00000596613 SPSB2Q99619 263 aa11.31□□□□□ -0.6
FARP1-220ENST00000596613 TRIM34Q9BYJ4 488 aa11.3□□□□□ -0.6
FARP1-220ENST00000596613 PRM3Q9NNZ6 103 aa11.3□□□□□ -0.6
FARP1-220ENST00000596613 TBC1D2BQ9UPU7 963 aa11.3□□□□□ -0.6
FARP1-220ENST00000596613 CGNL1Q0VF96 1302 aa11.3□□□□□ -0.6
FARP1-220ENST00000596613 BRWD3Q6RI45 1802 aa11.3□□□□□ -0.6
FARP1-220ENST00000596613 PIK3C2AO00443 1686 aa11.3□□□□□ -0.6
FARP1-220ENST00000596613 LCE2BO14633 110 aa11.29□□□□□ -0.6
FARP1-220ENST00000596613 PPEF1O14829 653 aaPredicted RBP11.29□□□□□ -0.6
FARP1-220ENST00000596613 FYB1O15117 783 aa11.29□□□□□ -0.6
FARP1-220ENST00000596613 IL2RBP14784 551 aa11.29□□□□□ -0.6
FARP1-220ENST00000596613 GGNBP2Q9H3C7 697 aa11.29□□□□□ -0.6
FARP1-220ENST00000596613 HSPA5P11021 654 aaKnown RBP11.28□□□□□ -0.6
FARP1-220ENST00000596613 PRR20EP86478 221 aa11.28□□□□□ -0.6
FARP1-220ENST00000596613 PRR20CP86479 221 aa11.28□□□□□ -0.6
FARP1-220ENST00000596613 PRR20DP86480 221 aa11.28□□□□□ -0.6
FARP1-220ENST00000596613 PRR20BP86481 221 aa11.28□□□□□ -0.6
FARP1-220ENST00000596613 PRR20AP86496 221 aa11.28□□□□□ -0.6
FARP1-220ENST00000596613 LYPD8Q6UX82 237 aa11.28□□□□□ -0.6
FARP1-220ENST00000596613 NDUFB9Q9Y6M9 179 aa11.28□□□□□ -0.6
FARP1-220ENST00000596613 MON2Q7Z3U7 1717 aa11.28□□□□□ -0.6
FARP1-220ENST00000596613 SMG6Q86US8 1419 aaKnown RBP11.27□□□□□ -0.6
FARP1-220ENST00000596613 CD163L1Q9NR16 1453 aa11.27□□□□□ -0.6
FARP1-220ENST00000596613 PPM1GO15355 546 aaPredicted RBP11.27□□□□□ -0.61
FARP1-220ENST00000596613 ABL2P42684 1182 aa11.27□□□□□ -0.61
FARP1-220ENST00000596613 EMID1Q96A84 441 aaPredicted RBP11.27□□□□□ -0.61
FARP1-220ENST00000596613 C1orf115Q9H7X2 142 aa11.27□□□□□ -0.61
FARP1-220ENST00000596613 PARD3Q8TEW0 1356 aa11.27□□□□□ -0.61
FARP1-220ENST00000596613 LMO7Q8WWI1 1683 aa11.27□□□□□ -0.61
FARP1-220ENST00000596613 OVOS2A0A0G2JMS6 1433 aa11.26□□□□□ -0.61
FARP1-220ENST00000596613 OVOS2A0A0J9YW53 1432 aa11.26□□□□□ -0.61
FARP1-220ENST00000596613 OVOS2Q6IE36 1432 aa11.26□□□□□ -0.61
FARP1-220ENST00000596613 ABCC6O95255 1503 aa11.26□□□□□ -0.61
FARP1-220ENST00000596613 EZH2Q15910 746 aaKnown RBP11.26□□□□□ -0.61
FARP1-220ENST00000596613 MSS51Q4VC12 460 aa11.26□□□□□ -0.61
FARP1-220ENST00000596613 ZNF697Q5TEC3 545 aa11.26□□□□□ -0.61
FARP1-220ENST00000596613 LIAT1Q6ZQX7 453 aa11.26□□□□□ -0.61
FARP1-220ENST00000596613 FAM160A2Q8N612 972 aaPredicted RBP11.26□□□□□ -0.61
FARP1-220ENST00000596613 EPS8L1Q8TE68 723 aa11.26□□□□□ -0.61
FARP1-220ENST00000596613 THSD7AQ9UPZ6 1657 aa11.25□□□□□ -0.61
FARP1-220ENST00000596613 JUNDP17535 347 aa11.25□□□□□ -0.61
FARP1-220ENST00000596613 HMGB2P26583 209 aaKnown RBP11.25□□□□□ -0.61
FARP1-220ENST00000596613 HOXC9P31274 260 aa11.25□□□□□ -0.61
FARP1-220ENST00000596613 TRIM67Q6ZTA4 783 aa11.25□□□□□ -0.61
FARP1-220ENST00000596613 RAPGEF4Q8WZA2 1011 aa11.25□□□□□ -0.61
FARP1-220ENST00000596613 KNSTRNQ9Y448 316 aa11.25□□□□□ -0.61
FARP1-220ENST00000596613 MAP3K19Q56UN5 1328 aa11.25□□□□□ -0.61
FARP1-220ENST00000596613 RGPD1P0DJD0 1748 aa11.24□□□□□ -0.61
FARP1-220ENST00000596613 DGAT1O75907 488 aa11.24□□□□□ -0.61
FARP1-220ENST00000596613 RRS1Q15050 365 aaKnown RBP11.24□□□□□ -0.61
FARP1-220ENST00000596613 NR6A1Q15406 480 aa11.24□□□□□ -0.61
FARP1-220ENST00000596613 PKDCCQ504Y2 493 aa11.24□□□□□ -0.61
FARP1-220ENST00000596613 DDX54Q8TDD1 881 aaKnown RBP11.24□□□□□ -0.61
FARP1-220ENST00000596613 NFAT5O94916 1531 aa11.24□□□□□ -0.61
FARP1-220ENST00000596613 PLSCR1O15162 318 aa11.23□□□□□ -0.61
FARP1-220ENST00000596613 GPR37L1O60883 481 aa11.23□□□□□ -0.61
FARP1-220ENST00000596613 TATP17735 454 aaPredicted RBP11.23□□□□□ -0.61
FARP1-220ENST00000596613 MARCH10Q8NA82 808 aaPredicted RBP11.23□□□□□ -0.61
FARP1-220ENST00000596613 CAMKK2Q96RR4 588 aa11.23□□□□□ -0.61
FARP1-220ENST00000596613 PANK3Q9H999 370 aa11.23□□□□□ -0.61
FARP1-220ENST00000596613 ZNF330Q9Y3S2 320 aaPredicted RBP11.23□□□□□ -0.61
FARP1-220ENST00000596613 RTL1A6NKG5 1358 aa11.22□□□□□ -0.61
FARP1-220ENST00000596613 DXOO77932 396 aaKnown RBP11.22□□□□□ -0.61
FARP1-220ENST00000596613 PTPRNQ16849 979 aa11.22□□□□□ -0.61
FARP1-220ENST00000596613 KIF24Q5T7B8 1368 aa11.22□□□□□ -0.61
FARP1-220ENST00000596613 WWC1Q8IX03 1113 aa11.22□□□□□ -0.61
FARP1-220ENST00000596613 ZCRB1Q8TBF4 217 aaKnown RBP11.22□□□□□ -0.61
FARP1-220ENST00000596613 CARD14Q9BXL6 1004 aa11.22□□□□□ -0.61
FARP1-220ENST00000596613 NSD3Q9BZ95 1437 aa11.22□□□□□ -0.61
FARP1-220ENST00000596613 PRDM9Q9NQV7 894 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms