RNA–Protein interactions for RNA: ENST00000586921.1

SMARCA4-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 569 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-211ENST00000586921 ZC3H15Q8WU90 426 aaKnown RBP17.45■□□□□ 0.38
SMARCA4-211ENST00000586921 SZT2Q5T011 3432 aa17.44■□□□□ 0.38
SMARCA4-211ENST00000586921 RNMTO43148 476 aaKnown RBP17.44■□□□□ 0.38
SMARCA4-211ENST00000586921 ZNF157P51786 506 aaPredicted RBP17.44■□□□□ 0.38
SMARCA4-211ENST00000586921 TTC5Q8N0Z6 440 aa17.44■□□□□ 0.38
SMARCA4-211ENST00000586921 TRIOBPQ9H2D6 2365 aa17.43■□□□□ 0.38
SMARCA4-211ENST00000586921 CDCA8Q53HL2 280 aa17.43■□□□□ 0.38
SMARCA4-211ENST00000586921 CC2D2BQ6DHV5 1058 aa17.43■□□□□ 0.38
SMARCA4-211ENST00000586921 SULT6B1Q6IMI4 303 aa17.43■□□□□ 0.38
SMARCA4-211ENST00000586921 SLC17A8Q8NDX2 589 aa17.43■□□□□ 0.38
SMARCA4-211ENST00000586921 GMPSP49915 693 aaPredicted RBP17.42■□□□□ 0.38
SMARCA4-211ENST00000586921 TPTE2Q6XPS3 522 aa17.42■□□□□ 0.38
SMARCA4-211ENST00000586921 DZIP3Q86Y13 1208 aaKnown RBP17.42■□□□□ 0.38
SMARCA4-211ENST00000586921 CSRNP1Q96S65 589 aa17.42■□□□□ 0.38
SMARCA4-211ENST00000586921 USP48Q86UV5 1035 aa17.41■□□□□ 0.38
SMARCA4-211ENST00000586921 C2orf69Q8N8R5 385 aa17.41■□□□□ 0.38
SMARCA4-211ENST00000586921 TEX13AQ9BXU3 409 aaPredicted RBP17.41■□□□□ 0.38
SMARCA4-211ENST00000586921 GBA2Q9HCG7 927 aaPredicted RBP17.41■□□□□ 0.38
SMARCA4-211ENST00000586921 NPC1L1Q9UHC9 1359 aa17.4■□□□□ 0.38
SMARCA4-211ENST00000586921 HIRAP54198 1017 aaPredicted RBP17.4■□□□□ 0.38
SMARCA4-211ENST00000586921 GRIPAP1Q4V328 841 aa17.4■□□□□ 0.38
SMARCA4-211ENST00000586921 FBXO46Q6PJ61 603 aaPredicted RBP17.4■□□□□ 0.38
SMARCA4-211ENST00000586921 CDHR2Q9BYE9 1310 aa17.4■□□□□ 0.38
SMARCA4-211ENST00000586921 PPIP5K2O43314 1243 aa17.39■□□□□ 0.37
SMARCA4-211ENST00000586921 A1BGP04217 495 aa17.39■□□□□ 0.37
SMARCA4-211ENST00000586921 SLC10A3P09131 477 aa17.39■□□□□ 0.37
SMARCA4-211ENST00000586921 CLEC4GQ6UXB4 293 aa17.39■□□□□ 0.37
SMARCA4-211ENST00000586921 TRPM4Q8TD43 1214 aa17.39■□□□□ 0.37
SMARCA4-211ENST00000586921 ZNF296Q8WUU4 475 aaPredicted RBP17.39■□□□□ 0.37
SMARCA4-211ENST00000586921 COLQQ9Y215 455 aaPredicted RBP17.39■□□□□ 0.37
SMARCA4-211ENST00000586921 ZNF652Q9Y2D9 606 aa17.39■□□□□ 0.37
SMARCA4-211ENST00000586921 HEG1Q9ULI3 1381 aa17.39■□□□□ 0.37
SMARCA4-211ENST00000586921 DLK2Q6UY11 383 aa17.38■□□□□ 0.37
SMARCA4-211ENST00000586921 REM2Q8IYK8 340 aaPredicted RBP17.38■□□□□ 0.37
SMARCA4-211ENST00000586921 ZNF496Q96IT1 587 aaPredicted RBP17.38■□□□□ 0.37
SMARCA4-211ENST00000586921 FAM177BA6PVY3 158 aa17.37■□□□□ 0.37
SMARCA4-211ENST00000586921 CXCL9Q07325 125 aa17.37■□□□□ 0.37
SMARCA4-211ENST00000586921 AOC3Q16853 763 aa17.37■□□□□ 0.37
SMARCA4-211ENST00000586921 BCL2L13Q9BXK5 485 aa17.37■□□□□ 0.37
SMARCA4-211ENST00000586921 CEP290O15078 2479 aa17.37■□□□□ 0.37
SMARCA4-211ENST00000586921 ZNRF3Q9ULT6 936 aa17.36■□□□□ 0.37
SMARCA4-211ENST00000586921 NIP7Q9Y221 180 aaKnown RBP eCLIP17.36■□□□□ 0.37
SMARCA4-211ENST00000586921 GTF2E1P29083 439 aaPredicted RBP17.35■□□□□ 0.37
SMARCA4-211ENST00000586921 CRY2Q49AN0 593 aa17.35■□□□□ 0.37
SMARCA4-211ENST00000586921 KRT26Q7Z3Y9 468 aa17.35■□□□□ 0.37
SMARCA4-211ENST00000586921 HTTP42858 3142 aa17.34■□□□□ 0.37
SMARCA4-211ENST00000586921 RPGRQ92834 1020 aaKnown RBP17.34■□□□□ 0.37
SMARCA4-211ENST00000586921 POTEFA5A3E0 1075 aa17.33■□□□□ 0.36
SMARCA4-211ENST00000586921 TBC1D8O95759 1140 aa17.33■□□□□ 0.36
SMARCA4-211ENST00000586921 ZNF790Q6PG37 636 aa17.33■□□□□ 0.36
SMARCA4-211ENST00000586921 CNOT7Q9UIV1 285 aaKnown RBP17.33■□□□□ 0.36
SMARCA4-211ENST00000586921 KIAA0100Q14667 2235 aaKnown RBP17.33■□□□□ 0.36
SMARCA4-211ENST00000586921 H7C1D1 291 aa17.32■□□□□ 0.36
SMARCA4-211ENST00000586921 SLC51AQ86UW1 340 aa17.32■□□□□ 0.36
SMARCA4-211ENST00000586921 VPS33BQ9H267 617 aa17.32■□□□□ 0.36
SMARCA4-211ENST00000586921 COL6A3P12111 3177 aa17.32■□□□□ 0.36
SMARCA4-211ENST00000586921 SHTN1A0MZ66 631 aa17.31■□□□□ 0.36
SMARCA4-211ENST00000586921 TCERG1O14776 1098 aaKnown RBP17.31■□□□□ 0.36
SMARCA4-211ENST00000586921 PPEF1O14829 653 aaPredicted RBP17.31■□□□□ 0.36
SMARCA4-211ENST00000586921 PIP4K2AP48426 406 aaPredicted RBP17.31■□□□□ 0.36
SMARCA4-211ENST00000586921 TNIP1Q15025 636 aa17.31■□□□□ 0.36
SMARCA4-211ENST00000586921 RASAL3Q86YV0 1011 aa17.31■□□□□ 0.36
SMARCA4-211ENST00000586921 CENPFP49454 3210 aa17.31■□□□□ 0.36
SMARCA4-211ENST00000586921 ABCC12Q96J65 1359 aa17.3■□□□□ 0.36
SMARCA4-211ENST00000586921 ADM5C9JUS6 153 aa17.3■□□□□ 0.36
SMARCA4-211ENST00000586921 RAD17O75943 681 aa17.3■□□□□ 0.36
SMARCA4-211ENST00000586921 INTS3Q68E01 1043 aaKnown RBP17.3■□□□□ 0.36
SMARCA4-211ENST00000586921 MICALL2Q8IY33 904 aa17.3■□□□□ 0.36
SMARCA4-211ENST00000586921 FMNL2Q96PY5 1086 aa17.3■□□□□ 0.36
SMARCA4-211ENST00000586921 BRCA2P51587 3418 aa17.29■□□□□ 0.36
SMARCA4-211ENST00000586921 GPR25O00155 361 aa17.29■□□□□ 0.36
SMARCA4-211ENST00000586921 DCPSQ96C86 337 aaKnown RBP17.29■□□□□ 0.36
SMARCA4-211ENST00000586921 TMX4Q9H1E5 349 aaPredicted RBP17.29■□□□□ 0.36
SMARCA4-211ENST00000586921 KIF7Q2M1P5 1343 aa17.28■□□□□ 0.36
SMARCA4-211ENST00000586921 HOXA10P31260 410 aaPredicted RBP17.28■□□□□ 0.36
SMARCA4-211ENST00000586921 IL13P35225 146 aa17.28■□□□□ 0.36
SMARCA4-211ENST00000586921 NOM1Q5C9Z4 860 aaKnown RBP17.28■□□□□ 0.36
SMARCA4-211ENST00000586921 RIC1Q4ADV7 1423 aa17.28■□□□□ 0.36
SMARCA4-211ENST00000586921 POLR2AP24928 1970 aaKnown RBP17.28■□□□□ 0.36
SMARCA4-211ENST00000586921 RBBP6Q7Z6E9 1792 aaKnown RBP17.28■□□□□ 0.36
SMARCA4-211ENST00000586921 PAPPA2Q9BXP8 1791 aa17.28■□□□□ 0.36
SMARCA4-211ENST00000586921 RGL2O15211 777 aa17.27■□□□□ 0.36
SMARCA4-211ENST00000586921 TEFQ10587 303 aa17.27■□□□□ 0.36
SMARCA4-211ENST00000586921 MTHFSDQ2M296 383 aaKnown RBP17.27■□□□□ 0.36
SMARCA4-211ENST00000586921 SAMD7Q7Z3H4 446 aa17.27■□□□□ 0.36
SMARCA4-211ENST00000586921 NUTM1Q86Y26 1132 aa17.27■□□□□ 0.36
SMARCA4-211ENST00000586921 SUPT20HQ8NEM7 779 aa17.27■□□□□ 0.36
SMARCA4-211ENST00000586921 RBM17Q96I25 401 aaKnown RBP17.27■□□□□ 0.36
SMARCA4-211ENST00000586921 CRAMP1Q96RY5 1269 aa17.26■□□□□ 0.35
SMARCA4-211ENST00000586921 NYXQ9GZU5 481 aa17.26■□□□□ 0.35
SMARCA4-211ENST00000586921 RANBP2P49792 3224 aaKnown RBP17.26■□□□□ 0.35
SMARCA4-211ENST00000586921 FKTNO75072 461 aa17.25■□□□□ 0.35
SMARCA4-211ENST00000586921 TBC1D10BQ4KMP7 808 aaPredicted RBP17.25■□□□□ 0.35
SMARCA4-211ENST00000586921 HMOX1P09601 288 aa17.24■□□□□ 0.35
SMARCA4-211ENST00000586921 SULF1Q8IWU6 871 aa17.24■□□□□ 0.35
SMARCA4-211ENST00000586921 RTFDC1Q9BY42 306 aaPredicted RBP17.24■□□□□ 0.35
SMARCA4-211ENST00000586921 EN2P19622 333 aaPredicted RBP17.23■□□□□ 0.35
SMARCA4-211ENST00000586921 MNX1P50219 401 aaPredicted RBP17.23■□□□□ 0.35
SMARCA4-211ENST00000586921 OTUD5Q96G74 571 aa17.23■□□□□ 0.35
SMARCA4-211ENST00000586921 ATP6V0A2Q9Y487 856 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms