RNA–Protein interactions for RNA: ENST00000583182.5

CDK5RAP3-226, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-226ENST00000583182 RRP7AQ9Y3A4 280 aaKnown RBP19.63■□□□□ 0.73
CDK5RAP3-226ENST00000583182 RIC1Q4ADV7 1423 aa19.62■□□□□ 0.73
CDK5RAP3-226ENST00000583182 RASSF10A6NK89 507 aa19.62■□□□□ 0.73
CDK5RAP3-226ENST00000583182 GPTP24298 496 aa19.62■□□□□ 0.73
CDK5RAP3-226ENST00000583182 HOXA10P31260 410 aaPredicted RBP19.62■□□□□ 0.73
CDK5RAP3-226ENST00000583182 CTCFP49711 727 aaPredicted RBP19.62■□□□□ 0.73
CDK5RAP3-226ENST00000583182 EIF4A1P60842 406 aaKnown RBP19.62■□□□□ 0.73
CDK5RAP3-226ENST00000583182 AIDAQ96BJ3 306 aa19.62■□□□□ 0.73
CDK5RAP3-226ENST00000583182 WBP1LQ9NX94 342 aa19.62■□□□□ 0.73
CDK5RAP3-226ENST00000583182 MYL6BP14649 208 aa19.61■□□□□ 0.73
CDK5RAP3-226ENST00000583182 DEFB115Q30KQ5 88 aa19.61■□□□□ 0.73
CDK5RAP3-226ENST00000583182 SUSD4Q5VX71 490 aa19.61■□□□□ 0.73
CDK5RAP3-226ENST00000583182 CC2D2BQ6DHV5 1058 aa19.61■□□□□ 0.73
CDK5RAP3-226ENST00000583182 KIF6Q6ZMV9 814 aa19.61■□□□□ 0.73
CDK5RAP3-226ENST00000583182 PNISRQ8TF01 805 aaKnown RBP19.61■□□□□ 0.73
CDK5RAP3-226ENST00000583182 RPGRQ92834 1020 aaKnown RBP19.61■□□□□ 0.73
CDK5RAP3-226ENST00000583182 GJA3Q9Y6H8 435 aa19.61■□□□□ 0.73
CDK5RAP3-226ENST00000583182 IBTKQ9P2D0 1353 aaPredicted RBP19.6■□□□□ 0.73
CDK5RAP3-226ENST00000583182 EIF6P56537 245 aaKnown RBP19.6■□□□□ 0.73
CDK5RAP3-226ENST00000583182 THUMPD2Q9BTF0 503 aaKnown RBP19.6■□□□□ 0.73
CDK5RAP3-226ENST00000583182 ZBTB3Q9H5J0 574 aa19.6■□□□□ 0.73
CDK5RAP3-226ENST00000583182 SCNN1DP51172 638 aa19.59■□□□□ 0.73
CDK5RAP3-226ENST00000583182 LBX1P52954 281 aa19.59■□□□□ 0.73
CDK5RAP3-226ENST00000583182 ZNF34Q8IZ26 560 aa19.59■□□□□ 0.73
CDK5RAP3-226ENST00000583182 PLEKHF1Q96S99 279 aa19.59■□□□□ 0.73
CDK5RAP3-226ENST00000583182 NTSR2O95665 410 aa19.58■□□□□ 0.72
CDK5RAP3-226ENST00000583182 FMR1Q06787 632 aaKnown RBP eCLIP19.58■□□□□ 0.72
CDK5RAP3-226ENST00000583182 C3orf67Q6ZVT6 689 aa19.58■□□□□ 0.72
CDK5RAP3-226ENST00000583182 CRAMP1Q96RY5 1269 aa19.58■□□□□ 0.72
CDK5RAP3-226ENST00000583182 DDX21Q9NR30 783 aaKnown RBP eCLIP19.58■□□□□ 0.72
CDK5RAP3-226ENST00000583182 WDR33Q9C0J8 1336 aaKnown RBP19.57■□□□□ 0.72
CDK5RAP3-226ENST00000583182 TCERG1O14776 1098 aaKnown RBP19.57■□□□□ 0.72
CDK5RAP3-226ENST00000583182 EPS15P42566 896 aa19.57■□□□□ 0.72
CDK5RAP3-226ENST00000583182 LARGE2Q8N3Y3 721 aa19.57■□□□□ 0.72
CDK5RAP3-226ENST00000583182 ABT1Q9ULW3 272 aaKnown RBP19.57■□□□□ 0.72
CDK5RAP3-226ENST00000583182 PPEF1O14829 653 aaPredicted RBP19.56■□□□□ 0.72
CDK5RAP3-226ENST00000583182 NEFMP07197 916 aa19.56■□□□□ 0.72
CDK5RAP3-226ENST00000583182 HSPA8P11142 646 aaKnown RBP19.56■□□□□ 0.72
CDK5RAP3-226ENST00000583182 LMOD1P29536 600 aaPredicted RBP19.56■□□□□ 0.72
CDK5RAP3-226ENST00000583182 NFE2L2Q16236 605 aa19.56■□□□□ 0.72
CDK5RAP3-226ENST00000583182 GRIPAP1Q4V328 841 aa19.56■□□□□ 0.72
CDK5RAP3-226ENST00000583182 GIGYF2Q6Y7W6 1299 aaKnown RBP19.56■□□□□ 0.72
CDK5RAP3-226ENST00000583182 RBM17Q96I25 401 aaKnown RBP19.56■□□□□ 0.72
CDK5RAP3-226ENST00000583182 TRPM7Q96QT4 1865 aa19.56■□□□□ 0.72
CDK5RAP3-226ENST00000583182 THSD7BQ9C0I4 1608 aa19.54■□□□□ 0.72
CDK5RAP3-226ENST00000583182 LRP10Q7Z4F1 713 aa19.54■□□□□ 0.72
CDK5RAP3-226ENST00000583182 ERBB4Q15303 1308 aa19.53■□□□□ 0.72
CDK5RAP3-226ENST00000583182 MAP2K1Q02750 393 aaPredicted RBP19.53■□□□□ 0.72
CDK5RAP3-226ENST00000583182 NIM1KQ8IY84 436 aa19.53■□□□□ 0.72
CDK5RAP3-226ENST00000583182 TRAF5O00463 557 aa19.52■□□□□ 0.72
CDK5RAP3-226ENST00000583182 PPIP5K2O43314 1243 aa19.52■□□□□ 0.72
CDK5RAP3-226ENST00000583182 PDIA6Q15084 440 aa19.52■□□□□ 0.72
CDK5RAP3-226ENST00000583182 AOC3Q16853 763 aa19.52■□□□□ 0.72
CDK5RAP3-226ENST00000583182 CST9Q5W186 159 aa19.52■□□□□ 0.72
CDK5RAP3-226ENST00000583182 USP50Q70EL3 339 aaPredicted RBP19.52■□□□□ 0.72
CDK5RAP3-226ENST00000583182 PPP1R42Q7Z4L9 355 aa19.52■□□□□ 0.72
CDK5RAP3-226ENST00000583182 LAMB2P55268 1798 aa19.52■□□□□ 0.71
CDK5RAP3-226ENST00000583182 PARP10Q53GL7 1025 aa19.51■□□□□ 0.71
CDK5RAP3-226ENST00000583182 NLRP3Q96P20 1036 aa19.51■□□□□ 0.71
CDK5RAP3-226ENST00000583182 ATP6V0A2Q9Y487 856 aa19.51■□□□□ 0.71
CDK5RAP3-226ENST00000583182 ANKRD36CQ5JPF3 1778 aa19.5■□□□□ 0.71
CDK5RAP3-226ENST00000583182 PROSER3Q2NL68 480 aa19.5■□□□□ 0.71
CDK5RAP3-226ENST00000583182 SLC10A5Q5PT55 438 aa19.5■□□□□ 0.71
CDK5RAP3-226ENST00000583182 CYP4F22Q6NT55 531 aa19.5■□□□□ 0.71
CDK5RAP3-226ENST00000583182 CAPNS2Q96L46 248 aa19.5■□□□□ 0.71
CDK5RAP3-226ENST00000583182 ABCC4O15439 1325 aa19.5■□□□□ 0.71
CDK5RAP3-226ENST00000583182 ANXA1P04083 346 aa19.49■□□□□ 0.71
CDK5RAP3-226ENST00000583182 EIF2S2P20042 333 aaKnown RBP19.49■□□□□ 0.71
CDK5RAP3-226ENST00000583182 PAXIP1Q6ZW49 1069 aaPredicted RBP19.49■□□□□ 0.71
CDK5RAP3-226ENST00000583182 UTP14AQ9BVJ6 771 aaKnown RBP19.49■□□□□ 0.71
CDK5RAP3-226ENST00000583182 GPRC5DQ9NZD1 345 aa19.49■□□□□ 0.71
CDK5RAP3-226ENST00000583182 TSPYL4Q9UJ04 414 aa19.49■□□□□ 0.71
CDK5RAP3-226ENST00000583182 MAPK8IP3Q9UPT6 1336 aa19.49■□□□□ 0.71
CDK5RAP3-226ENST00000583182 CXCL9Q07325 125 aa19.48■□□□□ 0.71
CDK5RAP3-226ENST00000583182 GRM1Q13255 1194 aa19.48■□□□□ 0.71
CDK5RAP3-226ENST00000583182 ABHD8Q96I13 439 aa19.48■□□□□ 0.71
CDK5RAP3-226ENST00000583182 RTFDC1Q9BY42 306 aaPredicted RBP19.48■□□□□ 0.71
CDK5RAP3-226ENST00000583182 VPS33BQ9H267 617 aa19.48■□□□□ 0.71
CDK5RAP3-226ENST00000583182 ADARB2Q9NS39 739 aaKnown RBP19.48■□□□□ 0.71
CDK5RAP3-226ENST00000583182 ECE1P42892 770 aa19.47■□□□□ 0.71
CDK5RAP3-226ENST00000583182 GPR101Q96P66 508 aaPredicted RBP19.47■□□□□ 0.71
CDK5RAP3-226ENST00000583182 ZNRF3Q9ULT6 936 aa19.47■□□□□ 0.71
CDK5RAP3-226ENST00000583182 TLL2Q9Y6L7 1015 aa19.47■□□□□ 0.71
CDK5RAP3-226ENST00000583182 TAF1P21675 1872 aa19.47■□□□□ 0.71
CDK5RAP3-226ENST00000583182 TMX4Q9H1E5 349 aaPredicted RBP19.46■□□□□ 0.71
CDK5RAP3-226ENST00000583182 PNNQ9H307 717 aaKnown RBP19.46■□□□□ 0.71
CDK5RAP3-226ENST00000583182 GMPSP49915 693 aaPredicted RBP19.45■□□□□ 0.7
CDK5RAP3-226ENST00000583182 SP8Q8IXZ3 490 aa19.45■□□□□ 0.7
CDK5RAP3-226ENST00000583182 SUPT20HQ8NEM7 779 aa19.45■□□□□ 0.7
CDK5RAP3-226ENST00000583182 AOC2O75106 756 aa19.44■□□□□ 0.7
CDK5RAP3-226ENST00000583182 BBOX1O75936 387 aa19.44■□□□□ 0.7
CDK5RAP3-226ENST00000583182 HCLS1P14317 486 aaPredicted RBP19.44■□□□□ 0.7
CDK5RAP3-226ENST00000583182 RIPK4P57078 832 aa19.44■□□□□ 0.7
CDK5RAP3-226ENST00000583182 DPP8Q6V1X1 898 aaPredicted RBP19.44■□□□□ 0.7
CDK5RAP3-226ENST00000583182 COPS6Q7L5N1 327 aa19.44■□□□□ 0.7
CDK5RAP3-226ENST00000583182 NLRP10Q86W26 655 aa19.44■□□□□ 0.7
CDK5RAP3-226ENST00000583182 MPNDQ8N594 471 aa19.44■□□□□ 0.7
CDK5RAP3-226ENST00000583182 NECTIN2Q92692 538 aa19.44■□□□□ 0.7
CDK5RAP3-226ENST00000583182 KIAA2012Q0VF49 1180 aa19.43■□□□□ 0.7
CDK5RAP3-226ENST00000583182 SAPCD2Q86UD0 394 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms