RNA–Protein interactions for RNA: ENST00000577598.5

BRIP1-202, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRIP1, Length 3,969 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-202ENST00000577598 NRBP1Q9UHY1 535 aa6.44□□□□□ -1.38
BRIP1-202ENST00000577598 TAGLN3Q9UI15 199 aa6.44□□□□□ -1.38
BRIP1-202ENST00000577598 PNMA3Q9UL41 463 aa6.44□□□□□ -1.38
BRIP1-202ENST00000577598 C3orf80F5H4A9 247 aa6.43□□□□□ -1.38
BRIP1-202ENST00000577598 SF3B2Q13435 895 aaKnown RBP6.43□□□□□ -1.38
BRIP1-202ENST00000577598 ZRSR2Q15696 482 aaKnown RBP6.43□□□□□ -1.38
BRIP1-202ENST00000577598 PODNQ7Z5L7 613 aa6.43□□□□□ -1.38
BRIP1-202ENST00000577598 UBP1Q9NZI7 540 aa6.43□□□□□ -1.38
BRIP1-202ENST00000577598 ZRANB1Q9UGI0 708 aa6.43□□□□□ -1.38
BRIP1-202ENST00000577598 EML3Q32P44 896 aa6.43□□□□□ -1.38
BRIP1-202ENST00000577598 C6orf118Q5T5N4 469 aa6.43□□□□□ -1.38
BRIP1-202ENST00000577598 RGL4Q8IZJ4 473 aa6.43□□□□□ -1.38
BRIP1-202ENST00000577598 YTHDC1Q96MU7 727 aaKnown RBP6.43□□□□□ -1.38
BRIP1-202ENST00000577598 YIPF4Q9BSR8 244 aa6.43□□□□□ -1.38
BRIP1-202ENST00000577598 GOLGA6CA6NDK9 693 aa6.43□□□□□ -1.38
BRIP1-202ENST00000577598 GOLGA6BA6NDN3 693 aa6.43□□□□□ -1.38
BRIP1-202ENST00000577598 B2RBV5 119 aa6.43□□□□□ -1.38
BRIP1-202ENST00000577598 POLR3DP05423 398 aaPredicted RBP6.43□□□□□ -1.38
BRIP1-202ENST00000577598 GOLGA6DP0CG33 693 aa6.43□□□□□ -1.38
BRIP1-202ENST00000577598 ATF4P18848 351 aaPredicted RBP6.43□□□□□ -1.38
BRIP1-202ENST00000577598 HDAC1Q13547 482 aaPredicted RBP6.43□□□□□ -1.38
BRIP1-202ENST00000577598 JPH3Q8WXH2 748 aaPredicted RBP6.43□□□□□ -1.38
BRIP1-202ENST00000577598 TRIM56Q9BRZ2 755 aaKnown RBP6.43□□□□□ -1.38
BRIP1-202ENST00000577598 GOLGA6AQ9NYA3 693 aa6.43□□□□□ -1.38
BRIP1-202ENST00000577598 GJA3Q9Y6H8 435 aa6.43□□□□□ -1.38
BRIP1-202ENST00000577598 SMAD1Q15797 465 aaKnown RBP6.42□□□□□ -1.38
BRIP1-202ENST00000577598 Q3C1V9 767 aa6.42□□□□□ -1.38
BRIP1-202ENST00000577598 TMUB1Q9BVT8 246 aa6.42□□□□□ -1.38
BRIP1-202ENST00000577598 TRIM35Q9UPQ4 493 aa6.42□□□□□ -1.38
BRIP1-202ENST00000577598 ZBTB39O15060 712 aa6.42□□□□□ -1.38
BRIP1-202ENST00000577598 MYL1P05976 194 aa6.42□□□□□ -1.38
BRIP1-202ENST00000577598 BTN2A1Q7KYR7 527 aa6.42□□□□□ -1.38
BRIP1-202ENST00000577598 SULF1Q8IWU6 871 aa6.42□□□□□ -1.38
BRIP1-202ENST00000577598 FTSJ3Q8IY81 847 aaKnown RBP6.42□□□□□ -1.38
BRIP1-202ENST00000577598 CHCHD4Q8N4Q1 142 aa6.42□□□□□ -1.38
BRIP1-202ENST00000577598 ARL10Q8N8L6 244 aa6.42□□□□□ -1.38
BRIP1-202ENST00000577598 ATRIPQ8WXE1 791 aa6.42□□□□□ -1.38
BRIP1-202ENST00000577598 CDCA7LQ96GN5 454 aa6.42□□□□□ -1.38
BRIP1-202ENST00000577598 EPB42P16452 691 aa6.42□□□□□ -1.38
BRIP1-202ENST00000577598 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.42□□□□□ -1.38
BRIP1-202ENST00000577598 CCT6BQ92526 530 aa6.42□□□□□ -1.38
BRIP1-202ENST00000577598 CLP1Q92989 425 aaKnown RBP6.42□□□□□ -1.38
BRIP1-202ENST00000577598 ATP6V1E2Q96A05 226 aa6.42□□□□□ -1.38
BRIP1-202ENST00000577598 CXXC1Q9P0U4 656 aaPredicted RBP6.42□□□□□ -1.38
BRIP1-202ENST00000577598 MRPS23Q9Y3D9 190 aaKnown RBP6.42□□□□□ -1.38
BRIP1-202ENST00000577598 HIP1RO75146 1068 aa6.42□□□□□ -1.38
BRIP1-202ENST00000577598 ZPR1O75312 459 aa6.42□□□□□ -1.38
BRIP1-202ENST00000577598 STK3Q13188 491 aa6.42□□□□□ -1.38
BRIP1-202ENST00000577598 SPATC1Q76KD6 591 aa6.42□□□□□ -1.38
BRIP1-202ENST00000577598 ENOX1Q8TC92 643 aaKnown RBP6.42□□□□□ -1.38
BRIP1-202ENST00000577598 E2F7Q96AV8 911 aa6.42□□□□□ -1.38
BRIP1-202ENST00000577598 GPRASP2Q96D09 838 aa6.42□□□□□ -1.38
BRIP1-202ENST00000577598 PRKD2Q9BZL6 878 aa6.42□□□□□ -1.38
BRIP1-202ENST00000577598 NOD1Q9Y239 953 aa6.42□□□□□ -1.38
BRIP1-202ENST00000577598 ATP5J2-PTCD1G3V325 749 aa6.41□□□□□ -1.38
BRIP1-202ENST00000577598 UBE4AQ14139 1066 aa6.41□□□□□ -1.38
BRIP1-202ENST00000577598 CLEC4GQ6UXB4 293 aa6.41□□□□□ -1.38
BRIP1-202ENST00000577598 LILRB2Q8N423 598 aa6.41□□□□□ -1.38
BRIP1-202ENST00000577598 CCDC89Q8N998 374 aa6.41□□□□□ -1.38
BRIP1-202ENST00000577598 GPR152Q8TDT2 470 aa6.41□□□□□ -1.38
BRIP1-202ENST00000577598 APPBP2Q92624 585 aa6.41□□□□□ -1.38
BRIP1-202ENST00000577598 PARP3Q9Y6F1 533 aa6.41□□□□□ -1.38
BRIP1-202ENST00000577598 F5H423 210 aaPredicted RBP6.41□□□□□ -1.38
BRIP1-202ENST00000577598 NUCB1Q02818 461 aa6.41□□□□□ -1.38
BRIP1-202ENST00000577598 INO80BQ9C086 356 aaPredicted RBP6.41□□□□□ -1.38
BRIP1-202ENST00000577598 ZBTB24O43167 697 aaPredicted RBP6.41□□□□□ -1.38
BRIP1-202ENST00000577598 FIBPO43427 364 aa6.41□□□□□ -1.38
BRIP1-202ENST00000577598 PRKAR2AP13861 404 aaKnown RBP6.41□□□□□ -1.38
BRIP1-202ENST00000577598 GBP2P32456 591 aaPredicted RBP6.41□□□□□ -1.38
BRIP1-202ENST00000577598 ZBED6P86452 979 aa6.41□□□□□ -1.38
BRIP1-202ENST00000577598 MYBPC2Q14324 1141 aa6.41□□□□□ -1.38
BRIP1-202ENST00000577598 KCTD2Q14681 263 aa6.41□□□□□ -1.38
BRIP1-202ENST00000577598 TNS4Q8IZW8 715 aa6.41□□□□□ -1.38
BRIP1-202ENST00000577598 ZNF512BQ96KM6 892 aaPredicted RBP6.41□□□□□ -1.38
BRIP1-202ENST00000577598 CUEDC1Q9NWM3 386 aaPredicted RBP6.41□□□□□ -1.38
BRIP1-202ENST00000577598 IL33O95760 270 aa6.4□□□□□ -1.38
BRIP1-202ENST00000577598 CD46P15529 392 aa6.4□□□□□ -1.38
BRIP1-202ENST00000577598 ZNF157P51786 506 aaPredicted RBP6.4□□□□□ -1.38
BRIP1-202ENST00000577598 PPP2R5CQ13362 524 aa6.4□□□□□ -1.38
BRIP1-202ENST00000577598 ALKBH2Q6NS38 261 aa6.4□□□□□ -1.38
BRIP1-202ENST00000577598 BNC2Q6ZN30 1099 aaPredicted RBP6.4□□□□□ -1.38
BRIP1-202ENST00000577598 DOLKQ9UPQ8 538 aa6.4□□□□□ -1.38
BRIP1-202ENST00000577598 SYNDIG1LA6NDD5 238 aa6.4□□□□□ -1.39
BRIP1-202ENST00000577598 PIP5K1CO60331 668 aa6.4□□□□□ -1.39
BRIP1-202ENST00000577598 SLF2Q8IX21 1173 aa6.4□□□□□ -1.39
BRIP1-202ENST00000577598 CCDC24Q8N4L8 307 aa6.4□□□□□ -1.39
BRIP1-202ENST00000577598 CCDC85AQ96PX6 553 aaPredicted RBP6.4□□□□□ -1.39
BRIP1-202ENST00000577598 MAF1Q9H063 256 aa6.4□□□□□ -1.39
BRIP1-202ENST00000577598 ESF1Q9H501 851 aaKnown RBP6.4□□□□□ -1.39
BRIP1-202ENST00000577598 RAB6BQ9NRW1 208 aa6.4□□□□□ -1.39
BRIP1-202ENST00000577598 MORC2Q9Y6X9 1032 aaPredicted RBP6.4□□□□□ -1.39
BRIP1-202ENST00000577598 PITPNM1O00562 1244 aa6.4□□□□□ -1.39
BRIP1-202ENST00000577598 OPLAHO14841 1288 aa6.39□□□□□ -1.39
BRIP1-202ENST00000577598 MT-CO1P00395 513 aa6.39□□□□□ -1.39
BRIP1-202ENST00000577598 ZNF354CQ86Y25 554 aa6.39□□□□□ -1.39
BRIP1-202ENST00000577598 NLRP2Q9NX02 1062 aa6.39□□□□□ -1.39
BRIP1-202ENST00000577598 ZNF180Q9UJW8 692 aa6.39□□□□□ -1.39
BRIP1-202ENST00000577598 INMTO95050 263 aa6.39□□□□□ -1.39
BRIP1-202ENST00000577598 XRCC5P13010 732 aaKnown RBP6.39□□□□□ -1.39
BRIP1-202ENST00000577598 DRC7Q8IY82 874 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms