RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 MBIPQ9NS73 344 aa11.79□□□□□ -0.52
NDE1-207ENST00000573203 IFT57Q9NWB7 429 aa11.79□□□□□ -0.52
NDE1-207ENST00000573203 ADCY9O60503 1353 aa11.79□□□□□ -0.52
NDE1-207ENST00000573203 SENP3-EIF4A1A0A087X0R7 540 aa11.78□□□□□ -0.52
NDE1-207ENST00000573203 HOXB7P09629 217 aa11.78□□□□□ -0.52
NDE1-207ENST00000573203 ZNF853P0CG23 659 aa11.78□□□□□ -0.52
NDE1-207ENST00000573203 PROSER3Q2NL68 480 aa11.78□□□□□ -0.52
NDE1-207ENST00000573203 HDGFL1Q5TGJ6 251 aa11.78□□□□□ -0.52
NDE1-207ENST00000573203 GPTP24298 496 aa11.77□□□□□ -0.53
NDE1-207ENST00000573203 AIMP1Q12904 312 aaKnown RBP11.77□□□□□ -0.53
NDE1-207ENST00000573203 DUSP27Q5VZP5 1158 aa11.77□□□□□ -0.53
NDE1-207ENST00000573203 GIGYF2Q6Y7W6 1299 aaKnown RBP11.77□□□□□ -0.53
NDE1-207ENST00000573203 LRP10Q7Z4F1 713 aa11.77□□□□□ -0.53
NDE1-207ENST00000573203 ZNF526Q8TF50 670 aaPredicted RBP11.77□□□□□ -0.53
NDE1-207ENST00000573203 NYXQ9GZU5 481 aa11.77□□□□□ -0.53
NDE1-207ENST00000573203 DDX21Q9NR30 783 aaKnown RBP eCLIP11.77□□□□□ -0.53
NDE1-207ENST00000573203 SBF1O95248 1867 aa11.76□□□□□ -0.53
NDE1-207ENST00000573203 SRGNP10124 158 aa11.76□□□□□ -0.53
NDE1-207ENST00000573203 C9orf131Q5VYM1 1079 aa11.76□□□□□ -0.53
NDE1-207ENST00000573203 STYK1Q6J9G0 422 aa11.76□□□□□ -0.53
NDE1-207ENST00000573203 COPS6Q7L5N1 327 aa11.76□□□□□ -0.53
NDE1-207ENST00000573203 XAGE3Q8WTP9 111 aa11.76□□□□□ -0.53
NDE1-207ENST00000573203 CNKSR1Q969H4 720 aa11.76□□□□□ -0.53
NDE1-207ENST00000573203 MASTLQ96GX5 879 aa11.76□□□□□ -0.53
NDE1-207ENST00000573203 PHF12Q96QT6 1004 aa11.76□□□□□ -0.53
NDE1-207ENST00000573203 GPBP1L1Q9HC44 474 aaPredicted RBP11.76□□□□□ -0.53
NDE1-207ENST00000573203 CHPF2Q9P2E5 772 aa11.76□□□□□ -0.53
NDE1-207ENST00000573203 ANKRD36CQ5JPF3 1778 aa11.75□□□□□ -0.53
NDE1-207ENST00000573203 ARFGEF2Q9Y6D5 1785 aa11.75□□□□□ -0.53
NDE1-207ENST00000573203 SLX4Q8IY92 1834 aa11.75□□□□□ -0.53
NDE1-207ENST00000573203 CCDC88AQ3V6T2 1871 aa11.75□□□□□ -0.53
NDE1-207ENST00000573203 CCDC27Q2M243 656 aa11.75□□□□□ -0.53
NDE1-207ENST00000573203 NUTM1Q86Y26 1132 aa11.75□□□□□ -0.53
NDE1-207ENST00000573203 IFNLR1Q8IU57 520 aaPredicted RBP11.75□□□□□ -0.53
NDE1-207ENST00000573203 ZNF34Q8IZ26 560 aa11.75□□□□□ -0.53
NDE1-207ENST00000573203 RNF181Q9P0P0 153 aa11.75□□□□□ -0.53
NDE1-207ENST00000573203 DBF4Q9UBU7 674 aaPredicted RBP11.75□□□□□ -0.53
NDE1-207ENST00000573203 UBN2Q6ZU65 1347 aa11.75□□□□□ -0.53
NDE1-207ENST00000573203 ELL2O00472 640 aaPredicted RBP11.74□□□□□ -0.53
NDE1-207ENST00000573203 C21orf2O43822 256 aa11.74□□□□□ -0.53
NDE1-207ENST00000573203 NPR1P16066 1061 aa11.74□□□□□ -0.53
NDE1-207ENST00000573203 RASSF7Q02833 373 aa11.74□□□□□ -0.53
NDE1-207ENST00000573203 ERFEQ4G0M1 354 aa11.74□□□□□ -0.53
NDE1-207ENST00000573203 PARP10Q53GL7 1025 aa11.74□□□□□ -0.53
NDE1-207ENST00000573203 HSP90AB3PQ58FF7 597 aa11.74□□□□□ -0.53
NDE1-207ENST00000573203 SUSD4Q5VX71 490 aa11.74□□□□□ -0.53
NDE1-207ENST00000573203 PRPF40BQ6NWY9 871 aaKnown RBP11.74□□□□□ -0.53
NDE1-207ENST00000573203 PPP1R42Q7Z4L9 355 aa11.74□□□□□ -0.53
NDE1-207ENST00000573203 FAM9BQ8IZU0 186 aa11.74□□□□□ -0.53
NDE1-207ENST00000573203 IBTKQ9P2D0 1353 aaPredicted RBP11.74□□□□□ -0.53
NDE1-207ENST00000573203 KLRG2A4D1S0 409 aaPredicted RBP11.73□□□□□ -0.53
NDE1-207ENST00000573203 WWC1Q8IX03 1113 aa11.73□□□□□ -0.53
NDE1-207ENST00000573203 ABCC12Q96J65 1359 aa11.73□□□□□ -0.53
NDE1-207ENST00000573203 TNRC6CQ9HCJ0 1690 aaKnown RBP11.73□□□□□ -0.53
NDE1-207ENST00000573203 HYPKQ9NX55 129 aa11.73□□□□□ -0.53
NDE1-207ENST00000573203 SALL2Q9Y467 1007 aaPredicted RBP11.73□□□□□ -0.53
NDE1-207ENST00000573203 FER1L6Q2WGJ9 1857 aa11.72□□□□□ -0.53
NDE1-207ENST00000573203 NTSR2O95665 410 aa11.72□□□□□ -0.53
NDE1-207ENST00000573203 LMNB1P20700 586 aa11.72□□□□□ -0.53
NDE1-207ENST00000573203 C1QTNF8P60827 252 aa11.72□□□□□ -0.53
NDE1-207ENST00000573203 C8orf58Q8NAV2 365 aa11.72□□□□□ -0.53
NDE1-207ENST00000573203 TSR2Q969E8 191 aaKnown RBP11.72□□□□□ -0.53
NDE1-207ENST00000573203 KIF12Q96FN5 646 aa11.72□□□□□ -0.53
NDE1-207ENST00000573203 UTP14AQ9BVJ6 771 aaKnown RBP11.72□□□□□ -0.53
NDE1-207ENST00000573203 CHMP4AQ9BY43 222 aa11.72□□□□□ -0.53
NDE1-207ENST00000573203 RIC1Q4ADV7 1423 aa11.71□□□□□ -0.53
NDE1-207ENST00000573203 IL16Q14005 1332 aa11.71□□□□□ -0.53
NDE1-207ENST00000573203 NFKBIEO00221 500 aa11.71□□□□□ -0.53
NDE1-207ENST00000573203 ALDH1B1P30837 517 aa11.71□□□□□ -0.53
NDE1-207ENST00000573203 TCIRG1Q13488 830 aa11.71□□□□□ -0.53
NDE1-207ENST00000573203 SOGA3Q5TF21 947 aa11.71□□□□□ -0.53
NDE1-207ENST00000573203 CCDC30Q5VVM6 783 aa11.71□□□□□ -0.53
NDE1-207ENST00000573203 ANKRD13DQ6ZTN6 518 aa11.71□□□□□ -0.53
NDE1-207ENST00000573203 PLBD2Q8NHP8 589 aa11.71□□□□□ -0.53
NDE1-207ENST00000573203 SPOCK2Q92563 424 aa11.71□□□□□ -0.53
NDE1-207ENST00000573203 RPGRQ92834 1020 aaKnown RBP11.71□□□□□ -0.53
NDE1-207ENST00000573203 TIAM2Q8IVF5 1701 aa11.7□□□□□ -0.54
NDE1-207ENST00000573203 GSE1Q14687 1217 aa11.7□□□□□ -0.54
NDE1-207ENST00000573203 CRY2Q49AN0 593 aa11.7□□□□□ -0.54
NDE1-207ENST00000573203 NLRP10Q86W26 655 aa11.7□□□□□ -0.54
NDE1-207ENST00000573203 NLRP3Q96P20 1036 aa11.7□□□□□ -0.54
NDE1-207ENST00000573203 DICER1Q9UPY3 1922 aaKnown RBP11.7□□□□□ -0.54
NDE1-207ENST00000573203 RNF123Q5XPI4 1314 aa11.69□□□□□ -0.54
NDE1-207ENST00000573203 GALR2O43603 387 aaPredicted RBP11.69□□□□□ -0.54
NDE1-207ENST00000573203 PRELPP51888 382 aa11.69□□□□□ -0.54
NDE1-207ENST00000573203 GOLGA2Q08379 1002 aa11.69□□□□□ -0.54
NDE1-207ENST00000573203 CCDC93Q567U6 631 aa11.69□□□□□ -0.54
NDE1-207ENST00000573203 RIC3Q7Z5B4 369 aa11.69□□□□□ -0.54
NDE1-207ENST00000573203 WDR63Q8IWG1 891 aa11.69□□□□□ -0.54
NDE1-207ENST00000573203 TSPYL6Q8N831 410 aa11.69□□□□□ -0.54
NDE1-207ENST00000573203 TAOK3Q9H2K8 898 aa11.69□□□□□ -0.54
NDE1-207ENST00000573203 TRMT112Q9UI30 125 aaKnown RBP11.69□□□□□ -0.54
NDE1-207ENST00000573203 KDM2BQ8NHM5 1336 aa11.68□□□□□ -0.54
NDE1-207ENST00000573203 LTBP3Q9NS15 1303 aa11.68□□□□□ -0.54
NDE1-207ENST00000573203 ZC3H4Q9UPT8 1303 aaKnown RBP11.68□□□□□ -0.54
NDE1-207ENST00000573203 TWISTNBQ3B726 338 aaPredicted RBP11.68□□□□□ -0.54
NDE1-207ENST00000573203 C7orf43Q8WVR3 580 aa11.68□□□□□ -0.54
NDE1-207ENST00000573203 RBM17Q96I25 401 aaKnown RBP11.68□□□□□ -0.54
NDE1-207ENST00000573203 PHAXQ9H814 394 aaKnown RBP11.68□□□□□ -0.54
NDE1-207ENST00000573203 LAMB2P55268 1798 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms