RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 PDE1AP54750 535 aa16.96■□□□□ 0.31
TPM1-215ENST00000558868 ITPK1Q13572 414 aa16.96■□□□□ 0.31
TPM1-215ENST00000558868 CDC45O75419 566 aa16.95■□□□□ 0.3
TPM1-215ENST00000558868 CASC1Q6TDU7 716 aa16.95■□□□□ 0.3
TPM1-215ENST00000558868 CLASRPQ8N2M8 674 aaKnown RBP16.95■□□□□ 0.3
TPM1-215ENST00000558868 DDRGK1Q96HY6 314 aa16.95■□□□□ 0.3
TPM1-215ENST00000558868 COPRSQ9NQ92 184 aa16.95■□□□□ 0.3
TPM1-215ENST00000558868 SALL3Q9BXA9 1300 aa16.95■□□□□ 0.3
TPM1-215ENST00000558868 CNTNAP4Q9C0A0 1308 aa16.95■□□□□ 0.3
TPM1-215ENST00000558868 RGL2O15211 777 aa16.94■□□□□ 0.3
TPM1-215ENST00000558868 RBM6P78332 1123 aaKnown RBP16.94■□□□□ 0.3
TPM1-215ENST00000558868 EPHA10Q5JZY3 1008 aa16.94■□□□□ 0.3
TPM1-215ENST00000558868 RC3H1Q5TC82 1133 aaKnown RBP16.94■□□□□ 0.3
TPM1-215ENST00000558868 ZBTB38Q8NAP3 1195 aaPredicted RBP16.94■□□□□ 0.3
TPM1-215ENST00000558868 OTUD7AQ8TE49 926 aaPredicted RBP16.94■□□□□ 0.3
TPM1-215ENST00000558868 GPATCH3Q96I76 525 aa16.94■□□□□ 0.3
TPM1-215ENST00000558868 BCL11AQ9H165 835 aa16.94■□□□□ 0.3
TPM1-215ENST00000558868 COL5A3P25940 1745 aaPredicted RBP16.93■□□□□ 0.3
TPM1-215ENST00000558868 HMGB2P26583 209 aaKnown RBP16.93■□□□□ 0.3
TPM1-215ENST00000558868 FOXO4P98177 505 aa16.93■□□□□ 0.3
TPM1-215ENST00000558868 PLA2G12BQ9BX93 195 aa16.93■□□□□ 0.3
TPM1-215ENST00000558868 IL1RAPL2Q9NP60 686 aa16.93■□□□□ 0.3
TPM1-215ENST00000558868 BTAF1O14981 1849 aa16.93■□□□□ 0.3
TPM1-215ENST00000558868 CDHR2Q9BYE9 1310 aa16.93■□□□□ 0.3
TPM1-215ENST00000558868 ANKRD36CQ5JPF3 1778 aa16.92■□□□□ 0.3
TPM1-215ENST00000558868 GSPT1P15170 499 aaKnown RBP16.92■□□□□ 0.3
TPM1-215ENST00000558868 HLFQ16534 295 aa16.92■□□□□ 0.3
TPM1-215ENST00000558868 LMBR1LQ6UX01 489 aa16.92■□□□□ 0.3
TPM1-215ENST00000558868 FAM196AQ6ZSG2 479 aa16.92■□□□□ 0.3
TPM1-215ENST00000558868 NLRP10Q86W26 655 aa16.92■□□□□ 0.3
TPM1-215ENST00000558868 JARID2Q92833 1246 aaPredicted RBP16.92■□□□□ 0.3
TPM1-215ENST00000558868 BCL11BQ9C0K0 894 aaPredicted RBP16.92■□□□□ 0.3
TPM1-215ENST00000558868 TBC1D2BQ9UPU7 963 aa16.92■□□□□ 0.3
TPM1-215ENST00000558868 PA2G4Q9UQ80 394 aaKnown RBP16.92■□□□□ 0.3
TPM1-215ENST00000558868 ZNF652Q9Y2D9 606 aa16.92■□□□□ 0.3
TPM1-215ENST00000558868 HSP90B1P14625 803 aaKnown RBP16.91■□□□□ 0.3
TPM1-215ENST00000558868 RFX5P48382 616 aaPredicted RBP16.91■□□□□ 0.3
TPM1-215ENST00000558868 PARP10Q53GL7 1025 aa16.91■□□□□ 0.3
TPM1-215ENST00000558868 IPO9Q96P70 1041 aaKnown RBP16.91■□□□□ 0.3
TPM1-215ENST00000558868 TTC41PQ6P2S7 1318 aa16.91■□□□□ 0.3
TPM1-215ENST00000558868 USP42Q9H9J4 1324 aaKnown RBP16.91■□□□□ 0.3
TPM1-215ENST00000558868 ERC2O15083 957 aa16.9■□□□□ 0.3
TPM1-215ENST00000558868 SEC24BO95487 1268 aa16.9■□□□□ 0.3
TPM1-215ENST00000558868 IFIT2P09913 472 aaKnown RBP16.9■□□□□ 0.3
TPM1-215ENST00000558868 SDSP20132 328 aa16.9■□□□□ 0.3
TPM1-215ENST00000558868 KRT27Q7Z3Y8 459 aa16.9■□□□□ 0.3
TPM1-215ENST00000558868 ZNF34Q8IZ26 560 aa16.9■□□□□ 0.3
TPM1-215ENST00000558868 LINC00116Q8NCU8 138 aa16.9■□□□□ 0.3
TPM1-215ENST00000558868 AK7Q96M32 723 aa16.9■□□□□ 0.3
TPM1-215ENST00000558868 CHMP3Q9Y3E7 222 aa16.9■□□□□ 0.3
TPM1-215ENST00000558868 NUP98P52948 1817 aa16.9■□□□□ 0.3
TPM1-215ENST00000558868 SBF2Q86WG5 1849 aa16.89■□□□□ 0.29
TPM1-215ENST00000558868 PTPN12Q05209 780 aaKnown RBP16.89■□□□□ 0.29
TPM1-215ENST00000558868 CLEC4GQ6UXB4 293 aa16.89■□□□□ 0.29
TPM1-215ENST00000558868 TBC1D9Q6ZT07 1266 aa16.89■□□□□ 0.29
TPM1-215ENST00000558868 CCNL1Q9UK58 526 aaPredicted RBP16.89■□□□□ 0.29
TPM1-215ENST00000558868 FBXO3Q9UK99 471 aa16.89■□□□□ 0.29
TPM1-215ENST00000558868 CAMTA2O94983 1202 aa16.88■□□□□ 0.29
TPM1-215ENST00000558868 GPTP24298 496 aa16.88■□□□□ 0.29
TPM1-215ENST00000558868 MFAP1P55081 439 aaKnown RBP16.88■□□□□ 0.29
TPM1-215ENST00000558868 NUTM1Q86Y26 1132 aa16.88■□□□□ 0.29
TPM1-215ENST00000558868 TBC1D32Q96NH3 1257 aa16.88■□□□□ 0.29
TPM1-215ENST00000558868 TRMT112Q9UI30 125 aaKnown RBP16.88■□□□□ 0.29
TPM1-215ENST00000558868 RPS6KA4O75676 772 aa16.87■□□□□ 0.29
TPM1-215ENST00000558868 GLRX3O76003 335 aaKnown RBP16.87■□□□□ 0.29
TPM1-215ENST00000558868 SASH1O94885 1247 aa16.87■□□□□ 0.29
TPM1-215ENST00000558868 CCDC57Q2TAC2 916 aa16.87■□□□□ 0.29
TPM1-215ENST00000558868 RTL5Q5HYW3 569 aaPredicted RBP16.87■□□□□ 0.29
TPM1-215ENST00000558868 FAM182BQ5T319 152 aa16.87■□□□□ 0.29
TPM1-215ENST00000558868 AACSQ86V21 672 aa16.87■□□□□ 0.29
TPM1-215ENST00000558868 FAM89AQ96GI7 184 aa16.87■□□□□ 0.29
TPM1-215ENST00000558868 SIL1Q9H173 461 aa16.87■□□□□ 0.29
TPM1-215ENST00000558868 ECHDC1Q9NTX5 307 aa16.87■□□□□ 0.29
TPM1-215ENST00000558868 MYH14Q7Z406 1995 aaKnown RBP16.87■□□□□ 0.29
TPM1-215ENST00000558868 PSDA5PKW4 1024 aaPredicted RBP16.86■□□□□ 0.29
TPM1-215ENST00000558868 CIAO1O76071 339 aa16.86■□□□□ 0.29
TPM1-215ENST00000558868 CSF1RP07333 972 aa16.86■□□□□ 0.29
TPM1-215ENST00000558868 IL15P40933 162 aaPredicted RBP16.86■□□□□ 0.29
TPM1-215ENST00000558868 UTP14AQ9BVJ6 771 aaKnown RBP16.86■□□□□ 0.29
TPM1-215ENST00000558868 C22orf23Q9BZE7 217 aa16.86■□□□□ 0.29
TPM1-215ENST00000558868 LY75O60449 1722 aa16.86■□□□□ 0.29
TPM1-215ENST00000558868 TRIM6-TRIM34B2RNG4 842 aa16.85■□□□□ 0.29
TPM1-215ENST00000558868 IRS4O14654 1257 aaPredicted RBP16.85■□□□□ 0.29
TPM1-215ENST00000558868 PDE8AO60658 829 aa16.85■□□□□ 0.29
TPM1-215ENST00000558868 PTF1AQ7RTS3 328 aa16.85■□□□□ 0.29
TPM1-215ENST00000558868 GPR108Q9NPR9 543 aa16.85■□□□□ 0.29
TPM1-215ENST00000558868 IFIT5Q13325 482 aaKnown RBP16.84■□□□□ 0.29
TPM1-215ENST00000558868 CNTROBQ8N137 903 aa16.84■□□□□ 0.29
TPM1-215ENST00000558868 KLHDC4Q8TBB5 520 aa16.84■□□□□ 0.29
TPM1-215ENST00000558868 PI4K2BQ8TCG2 481 aa16.84■□□□□ 0.29
TPM1-215ENST00000558868 RTCBQ9Y3I0 505 aaKnown RBP16.84■□□□□ 0.29
TPM1-215ENST00000558868 SH3TC1Q8TE82 1336 aa16.84■□□□□ 0.29
TPM1-215ENST00000558868 EYA2O00167 538 aa16.83■□□□□ 0.28
TPM1-215ENST00000558868 CTSWP56202 376 aa16.83■□□□□ 0.28
TPM1-215ENST00000558868 TAF7LQ5H9L4 462 aa16.83■□□□□ 0.28
TPM1-215ENST00000558868 SLC27A3Q5K4L6 730 aa16.83■□□□□ 0.28
TPM1-215ENST00000558868 BCORQ6W2J9 1755 aa16.83■□□□□ 0.28
TPM1-215ENST00000558868 UBN2Q6ZU65 1347 aa16.83■□□□□ 0.28
TPM1-215ENST00000558868 RILPL2Q969X0 211 aa16.83■□□□□ 0.28
TPM1-215ENST00000558868 DAXXQ9UER7 740 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms