RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 NBPF15Q8N660 670 aa6.78□□□□□ -1.32
PPP4R3A-204ENST00000554574 ITPKCQ96DU7 683 aa6.78□□□□□ -1.32
PPP4R3A-204ENST00000554574 AGBL1Q96MI9 1066 aa6.78□□□□□ -1.32
PPP4R3A-204ENST00000554574 CITED4Q96RK1 184 aa6.78□□□□□ -1.32
PPP4R3A-204ENST00000554574 FAM129BQ96TA1 746 aa6.78□□□□□ -1.32
PPP4R3A-204ENST00000554574 PRKD2Q9BZL6 878 aa6.78□□□□□ -1.32
PPP4R3A-204ENST00000554574 USP35Q9P2H5 1018 aa6.78□□□□□ -1.32
PPP4R3A-204ENST00000554574 PARP3Q9Y6F1 533 aa6.78□□□□□ -1.32
PPP4R3A-204ENST00000554574 MYO5CQ9NQX4 1742 aa6.78□□□□□ -1.32
PPP4R3A-204ENST00000554574 NAIPQ13075 1403 aa6.77□□□□□ -1.33
PPP4R3A-204ENST00000554574 NOS2P35228 1153 aa6.77□□□□□ -1.33
PPP4R3A-204ENST00000554574 PTGIRP43119 386 aa6.77□□□□□ -1.33
PPP4R3A-204ENST00000554574 TSNAXIP1Q2TAA8 658 aa6.77□□□□□ -1.33
PPP4R3A-204ENST00000554574 SPRYD7Q5W111 196 aa6.77□□□□□ -1.33
PPP4R3A-204ENST00000554574 Q6ZVU0 165 aa6.77□□□□□ -1.33
PPP4R3A-204ENST00000554574 ETFBKMTQ8IXQ9 262 aa6.77□□□□□ -1.33
PPP4R3A-204ENST00000554574 ALDH16A1Q8IZ83 802 aa6.77□□□□□ -1.33
PPP4R3A-204ENST00000554574 ABTB2Q8N961 1025 aa6.77□□□□□ -1.33
PPP4R3A-204ENST00000554574 ZNF232Q9UNY5 417 aa6.77□□□□□ -1.33
PPP4R3A-204ENST00000554574 HCN4Q9Y3Q4 1203 aa6.77□□□□□ -1.33
PPP4R3A-204ENST00000554574 WASF2Q9Y6W5 498 aa6.77□□□□□ -1.33
PPP4R3A-204ENST00000554574 CAMSAP2Q08AD1 1489 aa6.77□□□□□ -1.33
PPP4R3A-204ENST00000554574 MEN1O00255 615 aa6.76□□□□□ -1.33
PPP4R3A-204ENST00000554574 EHHADHQ08426 723 aa6.76□□□□□ -1.33
PPP4R3A-204ENST00000554574 MRPL58Q14197 206 aaKnown RBP6.76□□□□□ -1.33
PPP4R3A-204ENST00000554574 L3MBTL2Q969R5 705 aa6.76□□□□□ -1.33
PPP4R3A-204ENST00000554574 KLF16Q9BXK1 252 aaPredicted RBP6.76□□□□□ -1.33
PPP4R3A-204ENST00000554574 ZFAND3Q9H8U3 227 aa6.76□□□□□ -1.33
PPP4R3A-204ENST00000554574 CABP1Q9NZU7 370 aa6.76□□□□□ -1.33
PPP4R3A-204ENST00000554574 PKD2L1Q9P0L9 805 aa6.76□□□□□ -1.33
PPP4R3A-204ENST00000554574 DAPK1P53355 1430 aa6.76□□□□□ -1.33
PPP4R3A-204ENST00000554574 BRD2P25440 801 aaKnown RBP6.76□□□□□ -1.33
PPP4R3A-204ENST00000554574 MAPK8P45983 427 aa6.76□□□□□ -1.33
PPP4R3A-204ENST00000554574 FOXC1Q12948 553 aa6.76□□□□□ -1.33
PPP4R3A-204ENST00000554574 ROCK1Q13464 1354 aa6.76□□□□□ -1.33
PPP4R3A-204ENST00000554574 DGKZQ13574 1117 aa6.76□□□□□ -1.33
PPP4R3A-204ENST00000554574 ZNF697Q5TEC3 545 aa6.76□□□□□ -1.33
PPP4R3A-204ENST00000554574 DMRTB1Q96MA1 342 aa6.76□□□□□ -1.33
PPP4R3A-204ENST00000554574 RNF19AQ9NV58 838 aa6.76□□□□□ -1.33
PPP4R3A-204ENST00000554574 KLK14Q9P0G3 267 aa6.76□□□□□ -1.33
PPP4R3A-204ENST00000554574 KDM5BQ9UGL1 1544 aa6.76□□□□□ -1.33
PPP4R3A-204ENST00000554574 ZIC2O95409 532 aaPredicted RBP6.75□□□□□ -1.33
PPP4R3A-204ENST00000554574 LDHBP07195 334 aaKnown RBP6.75□□□□□ -1.33
PPP4R3A-204ENST00000554574 PLCB3Q01970 1234 aa6.75□□□□□ -1.33
PPP4R3A-204ENST00000554574 RTN1Q16799 776 aa6.75□□□□□ -1.33
PPP4R3A-204ENST00000554574 SETDB2Q96T68 719 aa6.75□□□□□ -1.33
PPP4R3A-204ENST00000554574 PHACTR1Q9C0D0 580 aa6.75□□□□□ -1.33
PPP4R3A-204ENST00000554574 POLIQ9UNA4 740 aa6.75□□□□□ -1.33
PPP4R3A-204ENST00000554574 TTC37Q6PGP7 1564 aa6.75□□□□□ -1.33
PPP4R3A-204ENST00000554574 ABCC5O15440 1437 aa6.74□□□□□ -1.33
PPP4R3A-204ENST00000554574 RELBQ01201 579 aa6.74□□□□□ -1.33
PPP4R3A-204ENST00000554574 GJD3Q8N144 294 aa6.74□□□□□ -1.33
PPP4R3A-204ENST00000554574 FAM161BQ96MY7 647 aa6.74□□□□□ -1.33
PPP4R3A-204ENST00000554574 BACH2Q9BYV9 841 aa6.74□□□□□ -1.33
PPP4R3A-204ENST00000554574 ZNF395Q9H8N7 513 aaPredicted RBP6.74□□□□□ -1.33
PPP4R3A-204ENST00000554574 WWC3Q9ULE0 1092 aa6.74□□□□□ -1.33
PPP4R3A-204ENST00000554574 ARHGEF5Q12774 1597 aa6.74□□□□□ -1.33
PPP4R3A-204ENST00000554574 DNM1Q05193 864 aaKnown RBP6.74□□□□□ -1.33
PPP4R3A-204ENST00000554574 PDE3BQ13370 1112 aa6.74□□□□□ -1.33
PPP4R3A-204ENST00000554574 C11orf91Q3C1V1 193 aa6.74□□□□□ -1.33
PPP4R3A-204ENST00000554574 LDLRAD1Q5T700 205 aa6.74□□□□□ -1.33
PPP4R3A-204ENST00000554574 ALKBH8Q96BT7 664 aaKnown RBP6.74□□□□□ -1.33
PPP4R3A-204ENST00000554574 NLRP3Q96P20 1036 aa6.74□□□□□ -1.33
PPP4R3A-204ENST00000554574 CFDP1Q9UEE9 299 aaPredicted RBP6.74□□□□□ -1.33
PPP4R3A-204ENST00000554574 PARP2Q9UGN5 583 aa6.74□□□□□ -1.33
PPP4R3A-204ENST00000554574 KDM6BO15054 1643 aa6.74□□□□□ -1.33
PPP4R3A-204ENST00000554574 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.73□□□□□ -1.33
PPP4R3A-204ENST00000554574 ADGRL2O95490 1459 aa6.73□□□□□ -1.33
PPP4R3A-204ENST00000554574 J3QL48 77 aa6.73□□□□□ -1.33
PPP4R3A-204ENST00000554574 PRPF40AO75400 957 aaKnown RBP6.73□□□□□ -1.33
PPP4R3A-204ENST00000554574 TIMP2P16035 220 aa6.73□□□□□ -1.33
PPP4R3A-204ENST00000554574 ZAP70P43403 619 aa6.73□□□□□ -1.33
PPP4R3A-204ENST00000554574 WDR4P57081 412 aaKnown RBP6.73□□□□□ -1.33
PPP4R3A-204ENST00000554574 ZNF598Q86UK7 904 aaKnown RBP6.73□□□□□ -1.33
PPP4R3A-204ENST00000554574 SNIP1Q8TAD8 396 aaKnown RBP6.73□□□□□ -1.33
PPP4R3A-204ENST00000554574 EDEM1Q92611 657 aa6.73□□□□□ -1.33
PPP4R3A-204ENST00000554574 IFT43Q96FT9 208 aa6.73□□□□□ -1.33
PPP4R3A-204ENST00000554574 ZSCAN10Q96SZ4 725 aaPredicted RBP6.73□□□□□ -1.33
PPP4R3A-204ENST00000554574 DUSP9Q99956 384 aaKnown RBP6.73□□□□□ -1.33
PPP4R3A-204ENST00000554574 NIF3L1Q9GZT8 377 aa6.73□□□□□ -1.33
PPP4R3A-204ENST00000554574 SAMD9LQ8IVG5 1584 aa6.73□□□□□ -1.33
PPP4R3A-204ENST00000554574 SHANK2Q9UPX8 1470 aa6.73□□□□□ -1.33
PPP4R3A-204ENST00000554574 ZNF644Q9H582 1327 aaPredicted RBP6.72□□□□□ -1.33
PPP4R3A-204ENST00000554574 PDGFAP04085 211 aa6.72□□□□□ -1.33
PPP4R3A-204ENST00000554574 MZF1P28698 734 aaPredicted RBP6.72□□□□□ -1.33
PPP4R3A-204ENST00000554574 TXLNAP40222 546 aa6.72□□□□□ -1.33
PPP4R3A-204ENST00000554574 NIFKQ9BYG3 293 aaKnown RBP6.72□□□□□ -1.33
PPP4R3A-204ENST00000554574 BCL11AQ9H165 835 aa6.72□□□□□ -1.33
PPP4R3A-204ENST00000554574 TMEM214Q6NUQ4 689 aaKnown RBP6.72□□□□□ -1.33
PPP4R3A-204ENST00000554574 XPCQ01831 940 aaPredicted RBP6.71□□□□□ -1.34
PPP4R3A-204ENST00000554574 RHBDD1Q8TEB9 315 aa6.71□□□□□ -1.34
PPP4R3A-204ENST00000554574 BCS1LQ9Y276 419 aa6.71□□□□□ -1.34
PPP4R3A-204ENST00000554574 ENOX2Q16206 610 aaKnown RBP6.7□□□□□ -1.34
PPP4R3A-204ENST00000554574 IFFO2Q5TF58 517 aa6.7□□□□□ -1.34
PPP4R3A-204ENST00000554574 TREML1Q86YW5 311 aa6.7□□□□□ -1.34
PPP4R3A-204ENST00000554574 C8orf37Q96NL8 207 aa6.7□□□□□ -1.34
PPP4R3A-204ENST00000554574 NCOA1Q15788 1441 aa6.7□□□□□ -1.34
PPP4R3A-204ENST00000554574 ARAP3Q8WWN8 1544 aa6.7□□□□□ -1.34
PPP4R3A-204ENST00000554574 MAST1Q9Y2H9 1570 aa6.7□□□□□ -1.34
PPP4R3A-204ENST00000554574 PNMA6FA0A0J9YX94 578 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms