RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 ATP5J2-PTCD1G3V325 749 aa11.92□□□□□ -0.5
SMARCC2-209ENST00000550164 PTCD1O75127 700 aaKnown RBP11.92□□□□□ -0.5
SMARCC2-209ENST00000550164 HMGB1P09429 215 aaKnown RBP11.92□□□□□ -0.5
SMARCC2-209ENST00000550164 TOP1P11387 765 aaKnown RBP11.92□□□□□ -0.5
SMARCC2-209ENST00000550164 CCDC57Q2TAC2 916 aa11.92□□□□□ -0.5
SMARCC2-209ENST00000550164 UNC5CLQ8IV45 518 aa11.92□□□□□ -0.5
SMARCC2-209ENST00000550164 SYTL4Q96C24 671 aaPredicted RBP11.92□□□□□ -0.5
SMARCC2-209ENST00000550164 BCL2L12Q9HB09 334 aa11.92□□□□□ -0.5
SMARCC2-209ENST00000550164 HYPKQ9NX55 129 aa11.92□□□□□ -0.5
SMARCC2-209ENST00000550164 TTC41PQ6P2S7 1318 aa11.92□□□□□ -0.5
SMARCC2-209ENST00000550164 CCDC171Q6TFL3 1326 aa11.92□□□□□ -0.5
SMARCC2-209ENST00000550164 A0A087WZG4 1122 aa11.92□□□□□ -0.5
SMARCC2-209ENST00000550164 NBPF7P0C2Y1 421 aaPredicted RBP11.92□□□□□ -0.5
SMARCC2-209ENST00000550164 LEKR1Q6ZMV7 388 aa11.92□□□□□ -0.5
SMARCC2-209ENST00000550164 AK7Q96M32 723 aa11.92□□□□□ -0.5
SMARCC2-209ENST00000550164 GTF2F1P35269 517 aaKnown RBP eCLIP11.91□□□□□ -0.5
SMARCC2-209ENST00000550164 CABP4P57796 275 aa11.91□□□□□ -0.5
SMARCC2-209ENST00000550164 SART3Q15020 963 aaKnown RBP11.91□□□□□ -0.5
SMARCC2-209ENST00000550164 TAF3Q5VWG9 929 aa11.91□□□□□ -0.5
SMARCC2-209ENST00000550164 CCDC69A6NI79 296 aa11.91□□□□□ -0.5
SMARCC2-209ENST00000550164 SNRKQ9NRH2 765 aa11.91□□□□□ -0.5
SMARCC2-209ENST00000550164 GOLGA8BA8MQT2 603 aa11.91□□□□□ -0.5
SMARCC2-209ENST00000550164 EVA1CP58658 441 aa11.91□□□□□ -0.5
SMARCC2-209ENST00000550164 THEMISQ8N1K5 641 aaPredicted RBP11.91□□□□□ -0.5
SMARCC2-209ENST00000550164 GTPBP4Q9BZE4 634 aaKnown RBP11.91□□□□□ -0.5
SMARCC2-209ENST00000550164 HSP90AA4PQ58FG1 418 aa11.9□□□□□ -0.5
SMARCC2-209ENST00000550164 CAGE1Q8TC20 777 aa11.9□□□□□ -0.5
SMARCC2-209ENST00000550164 NUP133Q8WUM0 1156 aa11.9□□□□□ -0.5
SMARCC2-209ENST00000550164 FAM227BQ96M60 508 aa11.9□□□□□ -0.5
SMARCC2-209ENST00000550164 CBX8Q9HC52 389 aa11.9□□□□□ -0.5
SMARCC2-209ENST00000550164 CNNM1Q9NRU3 951 aa11.9□□□□□ -0.5
SMARCC2-209ENST00000550164 ORC3Q9UBD5 711 aaPredicted RBP11.9□□□□□ -0.5
SMARCC2-209ENST00000550164 GRM8O00222 908 aa11.9□□□□□ -0.5
SMARCC2-209ENST00000550164 TRIM22Q8IYM9 498 aa11.9□□□□□ -0.5
SMARCC2-209ENST00000550164 CCDC82Q8N4S0 544 aa11.9□□□□□ -0.5
SMARCC2-209ENST00000550164 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.9□□□□□ -0.56e-7■■□□□ 14
SMARCC2-209ENST00000550164 PLXNC1O60486 1568 aa11.9□□□□□ -0.5
SMARCC2-209ENST00000550164 KIF24Q5T7B8 1368 aa11.9□□□□□ -0.5
SMARCC2-209ENST00000550164 IDH1O75874 414 aaKnown RBP11.9□□□□□ -0.5
SMARCC2-209ENST00000550164 XBP1P17861 261 aa11.9□□□□□ -0.5
SMARCC2-209ENST00000550164 NOM1Q5C9Z4 860 aaKnown RBP11.9□□□□□ -0.5
SMARCC2-209ENST00000550164 KLHL10Q6JEL2 608 aa11.9□□□□□ -0.5
SMARCC2-209ENST00000550164 CDC37L1Q7L3B6 337 aa11.9□□□□□ -0.5
SMARCC2-209ENST00000550164 SMARCE1Q969G3 411 aa11.9□□□□□ -0.5
SMARCC2-209ENST00000550164 DNAI1Q9UI46 699 aa11.9□□□□□ -0.5
SMARCC2-209ENST00000550164 USP16Q9Y5T5 823 aa11.9□□□□□ -0.5
SMARCC2-209ENST00000550164 ZSCAN12O43309 604 aa11.89□□□□□ -0.51
SMARCC2-209ENST00000550164 MARCH6O60337 910 aa11.89□□□□□ -0.51
SMARCC2-209ENST00000550164 CEBPAP49715 358 aaPredicted RBP11.89□□□□□ -0.51
SMARCC2-209ENST00000550164 CHST3Q7LGC8 479 aa11.89□□□□□ -0.51
SMARCC2-209ENST00000550164 ADCY10Q96PN6 1610 aa11.89□□□□□ -0.51
SMARCC2-209ENST00000550164 EDC4Q6P2E9 1401 aaKnown RBP11.89□□□□□ -0.51
SMARCC2-209ENST00000550164 LRMPQ12912 555 aa11.89□□□□□ -0.51
SMARCC2-209ENST00000550164 BMS1Q14692 1282 aaKnown RBP11.89□□□□□ -0.51
SMARCC2-209ENST00000550164 USP44Q9H0E7 712 aa11.89□□□□□ -0.51
SMARCC2-209ENST00000550164 ZSWIM4Q9H7M6 989 aa11.89□□□□□ -0.51
SMARCC2-209ENST00000550164 MTMR7Q9Y216 660 aa11.89□□□□□ -0.51
SMARCC2-209ENST00000550164 MYO5CQ9NQX4 1742 aa11.89□□□□□ -0.51
SMARCC2-209ENST00000550164 FLT4P35916 1363 aa11.89□□□□□ -0.51
SMARCC2-209ENST00000550164 PREX2Q70Z35 1606 aa11.89□□□□□ -0.51
SMARCC2-209ENST00000550164 CDKL5O76039 1030 aa11.89□□□□□ -0.51
SMARCC2-209ENST00000550164 LMOD1P29536 600 aaPredicted RBP11.89□□□□□ -0.51
SMARCC2-209ENST00000550164 AMOTQ4VCS5 1084 aa11.89□□□□□ -0.51
SMARCC2-209ENST00000550164 NOL10Q9BSC4 688 aaKnown RBP11.89□□□□□ -0.51
SMARCC2-209ENST00000550164 CLASP1Q7Z460 1538 aa11.88□□□□□ -0.51
SMARCC2-209ENST00000550164 SLU7O95391 586 aaKnown RBP11.88□□□□□ -0.51
SMARCC2-209ENST00000550164 ZNF853P0CG23 659 aa11.88□□□□□ -0.51
SMARCC2-209ENST00000550164 KSR2Q6VAB6 950 aa11.88□□□□□ -0.51
SMARCC2-209ENST00000550164 VPS37DQ86XT2 251 aa11.88□□□□□ -0.51
SMARCC2-209ENST00000550164 RASEFQ8IZ41 740 aa11.88□□□□□ -0.51
SMARCC2-209ENST00000550164 CPLX3Q8WVH0 158 aa11.88□□□□□ -0.51
SMARCC2-209ENST00000550164 DACH1Q9UI36 760 aa11.88□□□□□ -0.51
SMARCC2-209ENST00000550164 MYOM2P54296 1465 aa11.88□□□□□ -0.51
SMARCC2-209ENST00000550164 LIG1P18858 919 aa11.88□□□□□ -0.51
SMARCC2-209ENST00000550164 NAP1L1P55209 391 aaKnown RBP11.88□□□□□ -0.51
SMARCC2-209ENST00000550164 PHF8Q9UPP1 1060 aa11.88□□□□□ -0.51
SMARCC2-209ENST00000550164 PIP4K2AP48426 406 aaPredicted RBP11.88□□□□□ -0.51
SMARCC2-209ENST00000550164 ARHGAP29Q52LW3 1261 aa11.88□□□□□ -0.51
SMARCC2-209ENST00000550164 KCNH5Q8NCM2 988 aa11.88□□□□□ -0.51
SMARCC2-209ENST00000550164 MRPS27Q92552 414 aaKnown RBP11.88□□□□□ -0.51
SMARCC2-209ENST00000550164 CCDC102AQ96A19 550 aa11.88□□□□□ -0.51
SMARCC2-209ENST00000550164 RUFY1Q96T51 708 aa11.88□□□□□ -0.51
SMARCC2-209ENST00000550164 CUL4AQ13619 759 aa11.88□□□□□ -0.51
SMARCC2-209ENST00000550164 ME3Q16798 604 aa11.88□□□□□ -0.51
SMARCC2-209ENST00000550164 BRMS1Q9HCU9 246 aa11.88□□□□□ -0.51
SMARCC2-209ENST00000550164 CALCOCO1Q9P1Z2 691 aa11.88□□□□□ -0.51
SMARCC2-209ENST00000550164 PYCARDQ9ULZ3 195 aa11.88□□□□□ -0.51
SMARCC2-209ENST00000550164 ERLIN1O75477 346 aa11.87□□□□□ -0.51
SMARCC2-209ENST00000550164 ALDH1L1O75891 902 aa11.87□□□□□ -0.51
SMARCC2-209ENST00000550164 APOBRQ0VD83 1088 aa11.87□□□□□ -0.51
SMARCC2-209ENST00000550164 SLC39A6Q13433 755 aa11.87□□□□□ -0.51
SMARCC2-209ENST00000550164 AXDND1Q5T1B0 1012 aaPredicted RBP11.87□□□□□ -0.51
SMARCC2-209ENST00000550164 CNNM3Q8NE01 707 aa11.87□□□□□ -0.51
SMARCC2-209ENST00000550164 ERCC4Q92889 916 aaPredicted RBP11.87□□□□□ -0.51
SMARCC2-209ENST00000550164 CCDC47Q96A33 483 aaKnown RBP11.87□□□□□ -0.51
SMARCC2-209ENST00000550164 FEZ1Q99689 392 aa11.87□□□□□ -0.51
SMARCC2-209ENST00000550164 CROCC2H7BZ55 1655 aa11.87□□□□□ -0.51
SMARCC2-209ENST00000550164 IQGAP3Q86VI3 1631 aa11.87□□□□□ -0.51
SMARCC2-209ENST00000550164 SLC27A2O14975 620 aa11.87□□□□□ -0.51
SMARCC2-209ENST00000550164 CASQ1P31415 396 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms