RNA–Protein interactions for RNA: ENST00000548851.5

TSFM-209, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 3 BASIC

Gene TSFM, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-209ENST00000548851 NLRP10Q86W26 655 aa12.9□□□□□ -0.34
TSFM-209ENST00000548851 UTP14AQ9BVJ6 771 aaKnown RBP12.9□□□□□ -0.34
TSFM-209ENST00000548851 CACNA1FO60840 1977 aa12.89□□□□□ -0.35
TSFM-209ENST00000548851 ALDH1B1P30837 517 aa12.89□□□□□ -0.35
TSFM-209ENST00000548851 HOXA10P31260 410 aaPredicted RBP12.89□□□□□ -0.35
TSFM-209ENST00000548851 SOGA3Q5TF21 947 aa12.89□□□□□ -0.35
TSFM-209ENST00000548851 NUTM1Q86Y26 1132 aa12.89□□□□□ -0.35
TSFM-209ENST00000548851 ISCA1Q9BUE6 129 aa12.89□□□□□ -0.35
TSFM-209ENST00000548851 STK31Q9BXU1 1019 aa12.89□□□□□ -0.35
TSFM-209ENST00000548851 DDX58O95786 925 aaKnown RBP12.88□□□□□ -0.35
TSFM-209ENST00000548851 KCNA4P22459 653 aa12.88□□□□□ -0.35
TSFM-209ENST00000548851 DIEXFQ68CQ4 756 aaKnown RBP12.88□□□□□ -0.35
TSFM-209ENST00000548851 PRPF40BQ6NWY9 871 aaKnown RBP12.88□□□□□ -0.35
TSFM-209ENST00000548851 RIC3Q7Z5B4 369 aa12.88□□□□□ -0.35
TSFM-209ENST00000548851 C7orf43Q8WVR3 580 aa12.88□□□□□ -0.35
TSFM-209ENST00000548851 PHAXQ9H814 394 aaKnown RBP12.88□□□□□ -0.35
TSFM-209ENST00000548851 SPINK5Q9NQ38 1064 aaPredicted RBP12.88□□□□□ -0.35
TSFM-209ENST00000548851 ABCC12Q96J65 1359 aa12.88□□□□□ -0.35
TSFM-209ENST00000548851 SBF1O95248 1867 aa12.88□□□□□ -0.35
TSFM-209ENST00000548851 SLX4Q8IY92 1834 aa12.88□□□□□ -0.35
TSFM-209ENST00000548851 VAMP4O75379 141 aa12.87□□□□□ -0.35
TSFM-209ENST00000548851 NLRP3Q96P20 1036 aa12.87□□□□□ -0.35
TSFM-209ENST00000548851 TRMT112Q9UI30 125 aaKnown RBP12.87□□□□□ -0.35
TSFM-209ENST00000548851 SH3TC1Q8TE82 1336 aa12.87□□□□□ -0.35
TSFM-209ENST00000548851 LTBP3Q9NS15 1303 aa12.87□□□□□ -0.35
TSFM-209ENST00000548851 TNRC6CQ9HCJ0 1690 aaKnown RBP12.86□□□□□ -0.35
TSFM-209ENST00000548851 C21orf2O43822 256 aa12.86□□□□□ -0.35
TSFM-209ENST00000548851 SLC4A2P04920 1241 aa12.86□□□□□ -0.35
TSFM-209ENST00000548851 LMNB1P20700 586 aa12.86□□□□□ -0.35
TSFM-209ENST00000548851 EXOSC9Q06265 439 aaKnown RBP12.86□□□□□ -0.35
TSFM-209ENST00000548851 C9orf131Q5VYM1 1079 aa12.86□□□□□ -0.35
TSFM-209ENST00000548851 KSR2Q6VAB6 950 aa12.86□□□□□ -0.35
TSFM-209ENST00000548851 CRAMP1Q96RY5 1269 aa12.86□□□□□ -0.35
TSFM-209ENST00000548851 FER1L6Q2WGJ9 1857 aa12.86□□□□□ -0.35
TSFM-209ENST00000548851 ZC3H4Q9UPT8 1303 aaKnown RBP12.86□□□□□ -0.35
TSFM-209ENST00000548851 NFKBIEO00221 500 aa12.85□□□□□ -0.35
TSFM-209ENST00000548851 CC2D2BQ6DHV5 1058 aa12.85□□□□□ -0.35
TSFM-209ENST00000548851 CCDC191Q8NCU4 936 aa12.85□□□□□ -0.35
TSFM-209ENST00000548851 RPGRQ92834 1020 aaKnown RBP12.85□□□□□ -0.35
TSFM-209ENST00000548851 METTL22Q9BUU2 404 aaPredicted RBP12.85□□□□□ -0.35
TSFM-209ENST00000548851 CACNA1SQ13698 1873 aa12.85□□□□□ -0.35
TSFM-209ENST00000548851 E9PSI1 815 aa12.84□□□□□ -0.35
TSFM-209ENST00000548851 ATP5J2-PTCD1G3V325 749 aa12.84□□□□□ -0.35
TSFM-209ENST00000548851 HSP90B1P14625 803 aaKnown RBP12.84□□□□□ -0.35
TSFM-209ENST00000548851 GRIPAP1Q4V328 841 aa12.84□□□□□ -0.35
TSFM-209ENST00000548851 RBM17Q96I25 401 aaKnown RBP12.84□□□□□ -0.35
TSFM-209ENST00000548851 PI4KAP2A4QPH2 592 aa12.83□□□□□ -0.36
TSFM-209ENST00000548851 HCLS1P14317 486 aaPredicted RBP12.83□□□□□ -0.36
TSFM-209ENST00000548851 CCDC93Q567U6 631 aa12.83□□□□□ -0.36
TSFM-209ENST00000548851 RTKN2Q8IZC4 609 aa12.83□□□□□ -0.36
TSFM-209ENST00000548851 PI4KAP1Q8N8J0 262 aa12.83□□□□□ -0.36
TSFM-209ENST00000548851 RNF181Q9P0P0 153 aa12.83□□□□□ -0.36
TSFM-209ENST00000548851 TCERG1O14776 1098 aaKnown RBP12.82□□□□□ -0.36
TSFM-209ENST00000548851 BBOX1O75936 387 aa12.82□□□□□ -0.36
TSFM-209ENST00000548851 RASSF7Q02833 373 aa12.82□□□□□ -0.36
TSFM-209ENST00000548851 SLFN5Q08AF3 891 aa12.82□□□□□ -0.36
TSFM-209ENST00000548851 NEXNQ0ZGT2 675 aa12.82□□□□□ -0.36
TSFM-209ENST00000548851 FLIIQ13045 1269 aa12.82□□□□□ -0.36
TSFM-209ENST00000548851 C3orf67Q6ZVT6 689 aa12.82□□□□□ -0.36
TSFM-209ENST00000548851 G2E3Q7L622 706 aa12.82□□□□□ -0.36
TSFM-209ENST00000548851 MIER1Q8N108 512 aa12.82□□□□□ -0.36
TSFM-209ENST00000548851 SYNE4Q8N205 404 aa12.82□□□□□ -0.36
TSFM-209ENST00000548851 ZBTB38Q8NAP3 1195 aaPredicted RBP12.82□□□□□ -0.36
TSFM-209ENST00000548851 FAM89AQ96GI7 184 aa12.82□□□□□ -0.36
TSFM-209ENST00000548851 MYD88Q99836 296 aa12.82□□□□□ -0.36
TSFM-209ENST00000548851 TAOK3Q9H2K8 898 aa12.82□□□□□ -0.36
TSFM-209ENST00000548851 GPBP1L1Q9HC44 474 aaPredicted RBP12.82□□□□□ -0.36
TSFM-209ENST00000548851 CWC25Q9NXE8 425 aaPredicted RBP12.82□□□□□ -0.36
TSFM-209ENST00000548851 ZNF219Q9P2Y4 722 aaPredicted RBP12.82□□□□□ -0.36
TSFM-209ENST00000548851 MAP3K2Q9Y2U5 619 aa12.82□□□□□ -0.36
TSFM-209ENST00000548851 CCDC88AQ3V6T2 1871 aa12.82□□□□□ -0.36
TSFM-209ENST00000548851 DICER1Q9UPY3 1922 aaKnown RBP12.82□□□□□ -0.36
TSFM-209ENST00000548851 LAMB2P55268 1798 aa12.81□□□□□ -0.36
TSFM-209ENST00000548851 PCCAP05165 728 aaPredicted RBP12.81□□□□□ -0.36
TSFM-209ENST00000548851 PRELPP51888 382 aa12.81□□□□□ -0.36
TSFM-209ENST00000548851 SF3B3Q15393 1217 aaKnown RBP12.81□□□□□ -0.36
TSFM-209ENST00000548851 TRMT2AQ8IZ69 625 aaKnown RBP12.81□□□□□ -0.36
TSFM-209ENST00000548851 ZNF428Q96B54 188 aa12.81□□□□□ -0.36
TSFM-209ENST00000548851 DDX60Q8IY21 1712 aaKnown RBP12.81□□□□□ -0.36
TSFM-209ENST00000548851 FKBP4Q02790 459 aaKnown RBP eCLIP12.8□□□□□ -0.36
TSFM-209ENST00000548851 DDX46Q7L014 1031 aaKnown RBP12.8□□□□□ -0.36
TSFM-209ENST00000548851 TMC4Q7Z404 712 aa12.8□□□□□ -0.36
TSFM-209ENST00000548851 PSMD1Q99460 953 aa12.8□□□□□ -0.36
TSFM-209ENST00000548851 SNED1Q8TER0 1413 aa12.79□□□□□ -0.36
TSFM-209ENST00000548851 IRS4O14654 1257 aaPredicted RBP12.79□□□□□ -0.36
TSFM-209ENST00000548851 IGKV5-2P06315 115 aa12.79□□□□□ -0.36
TSFM-209ENST00000548851 FKBP5Q13451 457 aaPredicted RBP12.79□□□□□ -0.36
TSFM-209ENST00000548851 CNKSR2Q8WXI2 1034 aa12.79□□□□□ -0.36
TSFM-209ENST00000548851 TMX4Q9H1E5 349 aaPredicted RBP12.79□□□□□ -0.36
TSFM-209ENST00000548851 ATP6V0A2Q9Y487 856 aa12.79□□□□□ -0.36
TSFM-209ENST00000548851 ABCC4O15439 1325 aa12.79□□□□□ -0.36
TSFM-209ENST00000548851 KDM2BQ8NHM5 1336 aa12.79□□□□□ -0.36
TSFM-209ENST00000548851 PPEF1O14829 653 aaPredicted RBP12.78□□□□□ -0.36
TSFM-209ENST00000548851 GRAPQ13588 217 aa12.78□□□□□ -0.36
TSFM-209ENST00000548851 SP8Q8IXZ3 490 aa12.78□□□□□ -0.36
TSFM-209ENST00000548851 LINS1Q8NG48 757 aa12.78□□□□□ -0.36
TSFM-209ENST00000548851 GRAPLQ8TC17 118 aaPredicted RBP12.78□□□□□ -0.36
TSFM-209ENST00000548851 DNAAF4Q8WXU2 420 aa12.78□□□□□ -0.36
TSFM-209ENST00000548851 CDHR2Q9BYE9 1310 aa12.78□□□□□ -0.36
TSFM-209ENST00000548851 GLTPD2A6NH11 291 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 399.4 ms